COMMD9

COMMD9
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 4NKN, 4OE9
Identifiers
Aliases	COMMD9 , HSPC166, COMM domain containing 9, C11orf55, LINC00610
External IDs	OMIM: 612299; MGI: 1923751; HomoloGene: 8584; GeneCards: COMMD9; OMA:COMMD9 - orthologs
Gene location (Human) Chr. Chromosome 11 (human) [1] Band 11p13 Start 36,269,284 bp [1] End 36,289,449 bp [1]
Gene location (Mouse) Chr. Chromosome 2 (mouse) [2] Band 2|2 E2 Start 101,716,592 bp [2] End 101,731,991 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in muscle of thigh prefrontal cortex monocyte granulocyte islet of Langerhans C1 segment anterior cingulate cortex right adrenal gland ganglionic eminence right frontal lobe Top expressed in yolk sac muscle of thigh right kidney lip masseter muscle ventricular zone proximal tubule ganglionic eminence neural tube skeletal muscle tissue More reference expression data BioGPS More reference expression data
Gene ontology Molecular function protein binding Cellular component cytoplasmic vesicle extracellular region nucleus Golgi apparatus cytosol secretory granule lumen ficolin-1-rich granule lumen Biological process regulation of transcription, DNA-templated ion transport transcription, DNA-templated sodium ion transport neutrophil degranulation cholesterol homeostasis Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 29099 76501 Ensembl ENSG00000110442 ENSMUSG00000027163 UniProt Q9P000 Q8K2Q0 RefSeq (mRNA) NM_001101653 NM_001307932 NM_001307937 NM_014186 NM_207428 NM_029635 RefSeq (protein) NP_001095123 NP_001294861 NP_001294866 NP_054905 NP_083911 Location (UCSC) Chr 11: 36.27 – 36.29 Mb Chr 2: 101.72 – 101.73 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

COMM domain-containing protein 9 is a protein that in humans is encoded by the COMMD9 gene. ^{[5] [6]}

References

1. GRCh38: Ensembl release 89: ENSG00000110442 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000027163 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Burstein E, Hoberg JE, Wilkinson AS, Rumble JM, Csomos RA, Komarck CM, Maine GN, Wilkinson JC, Mayo MW, Duckett CS (Jun 2005). "COMMD proteins, a novel family of structural and functional homologs of MURR1". J Biol Chem. 280 (23): 22222–32. doi: 10.1074/jbc.M501928200 . PMID   15799966.
6. "Entrez Gene: COMMD9 COMM domain containing 9".

External links

• Human COMMD9 genome location and COMMD9 gene details page in the UCSC Genome Browser .

Further reading

• Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC   528928 . PMID   15489334.
• Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi: 10.1038/ng1285 . PMID   14702039.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi: 10.1073/pnas.242603899 . PMC   139241 . PMID   12477932.
• Wiemann S, Weil B, Wellenreuther R, et al. (2001). "Toward a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs". Genome Res. 11 (3): 422–35. doi:10.1101/gr.GR1547R. PMC   311072 . PMID   11230166.
• Zhang QH, Ye M, Wu XY, et al. (2001). "Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells". Genome Res. 10 (10): 1546–60. doi:10.1101/gr.140200. PMC   310934 . PMID   11042152.
• Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, et al. (1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–56. doi:10.1016/S0378-1119(97)00411-3. PMID   9373149.
• Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–4. doi:10.1016/0378-1119(94)90802-8. PMID   8125298.