Caballeronia sordidicola | |
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Species: | C. sordidicola |
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Caballeronia sordidicola (Lim et al. 2003) Dobritsa and Samadpour 2016 [1] | |
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Caballeronia sordidicola is a species of bacteria [2] which has been reported to perform biological nitrogen fixation and promote plant growth [3] [4] [5] [6]
In botany, an evergreen is a plant which has foliage that remains green and functional through more than one growing season. This also pertains to plants that retain their foliage only in warm climates, and contrasts with deciduous plants, which completely lose their foliage during the winter or dry season.
Conifers are a group of cone-bearing seed plants, a subset of gymnosperms. Scientifically, they make up the division Pinophyta, also known as Coniferophyta or Coniferae. The division contains a single extant class, Pinopsida. All extant conifers are perennial woody plants with secondary growth. The great majority are trees, though a few are shrubs. Examples include cedars, Douglas-firs, cypresses, firs, junipers, kauri, larches, pines, hemlocks, redwoods, spruces, and yews. As of 1998, the division Pinophyta was estimated to contain eight families, 68 genera, and 629 living species.
Pinus contorta, with the common names lodgepole pine and shore pine, and also known as twisted pine, and contorta pine, is a common tree in western North America. It is common near the ocean shore and in dry montane forests to the subalpine, but is rare in lowland rain forests. Like all pines, it is an evergreen conifer.
An endophyte is an endosymbiont, often a bacterium or fungus, that lives within a plant for at least part of its life cycle without causing apparent disease. Endophytes are ubiquitous and have been found in all species of plants studied to date; however, most of the endophyte/plant relationships are not well understood. Some endophytes may enhance host growth, nutrient acquisition and improve the plant's ability to tolerate abiotic stresses, such as drought, salinity and decrease biotic stresses by enhancing plant resistance to insects, pathogens and herbivores.
Diazotrophs are bacteria and archaea that fix atmospheric nitrogen gas into a more usable form such as ammonia.
The Burkholderiales are an order of Pseudomonadota. Like all Pseudomonadota, they are Gram-negative. They include several pathogenic bacteria, including species of Burkholderia, Bordetella, and Ralstonia. They also include Oxalobacter and related genera, which are unusual in using oxalic acid as their source of carbon. Other well-studied genera include Alcaligenes, Cupriavidus, Achromobacter, Comamonas, Delftia, Massilia, Duganella, Janthinobacterium, Polynucleobacter, non-pathogenic Paraburkholderia, Caballeronia, Polaromonas, Thiomonas, Collimonas, Hydrogenophaga, Sphaerotilus, Variovorax, Acidovorax, Rubrivivax and Rhodoferax, and Herbaspirillum.
Picea glauca, the white spruce, is a species of spruce native to the northern temperate and boreal forests in North America. Picea glauca is native from central Alaska all through the east, across southern/central Canada to the Avalon Peninsula in Newfoundland, and south to Montana, Minnesota, Wisconsin, Michigan, Vermont, New Hampshire, New York and Maine; there is also an isolated population in the Black Hills of South Dakota and Wyoming. It is also known as Canadian spruce, skunk spruce, cat spruce, Black Hills spruce, western white spruce, Alberta white spruce, and Porsild spruce.
Paenibacillus is a genus of facultative anaerobic, endospore-forming bacteria, originally included within the genus Bacillus and then reclassified as a separate genus in 1993. Bacteria belonging to this genus have been detected in a variety of environments, such as: soil, water, rhizosphere, vegetable matter, forage and insect larvae, as well as clinical samples. The name reflects: Latin paene means almost, so the paenibacilli are literally "almost bacilli". The genus includes P. larvae, which causes American foulbrood in honeybees, P. polymyxa, which is capable of fixing nitrogen, so is used in agriculture and horticulture, the Paenibacillus sp. JDR-2 which is a rich source of chemical agents for biotechnology applications, and pattern-forming strains such as P. vortex and P. dendritiformis discovered in the early 90s, which develop complex colonies with intricate architectures as shown in the pictures:
Soil acidification is the buildup of hydrogen cations, which reduces the soil pH. Chemically, this happens when a proton donor gets added to the soil. The donor can be an acid, such as nitric acid, sulfuric acid, or carbonic acid. It can also be a compound such as aluminium sulfate, which reacts in the soil to release protons. Acidification also occurs when base cations such as calcium, magnesium, potassium and sodium are leached from the soil.
Paenibacillus polymyxa, also known as Bacillus polymyxa, is a Gram-positive bacterium capable of fixing nitrogen. It is found in soil, plant tissues, marine sediments and hot springs. It may have a role in forest ecosystems and potential future applications as a biofertilizer and biocontrol agent in agriculture.
Pseudomonas lini is a fluorescent, Gram-negative, rod-shaped bacterium isolated from rhizospheric soil in France. The type strain is CFBP 5737, though there are also eight other strains known. This bacterium has also been isolated from endophytic tissues of lodgepole pine trees growing on gravel mining sites with potential to perform biological nitrogen fixation and plant growth promotion.
Pseudomonas migulae is a fluorescent, Gram-negative, rod-shaped bacterium isolated from natural mineral waters in France. This bacterium has also been isolated from endophytic tissues of lodgepole pine trees growing on gravel mining sites with potential to perform biological nitrogen fixation and plant growth promotion. Based on 16S rRNA analysis, P. migulae has been placed in the P. fluorescens group.
Paraburkholderia phytofirmans is a species of bacteria. They have been reported to colonize endophytic tissues of hybrid spruce and lodgepole pine with a strong potential to perform biological nitrogen fixation and plant growth promotion.
Caballeronia humi is a Gram-negative, aerobic, non-motile bacterium from the genus Burkholderia and the family Burkholderiaceae which was isolated from peat soil in Russia.
Caballeronia telluris is a bacterium from the genus Caballeronia and the family Burkholderiaceae.
Caballeronia terrestris is a bacterium from the genus Burkholderia and family Burkholderiaceae.
Caballeronia udeis is a bacterium from the genus Caballeronia and family Burkholderiaceae which has been reported to perform biological nitrogen fixation and promote plant growth
Paraburkholderia rhizosphaerae is a bacterium from the genus of Paraburkholderia which has been isolated from rhizosphere soil in Daejeon in Korea.
Paraburkholderia is a genus of Pseudomonadota that are gram negative, slightly curved rods that are motile by means of flagella. They have been reported to colonize endophytic tissues of hybrid spruce and lodgepole pine with a strong potential to perform biological nitrogen fixation and plant growth promotion. Unlike Burkholderia species, Paraburkholderia members are not commonly associated with human infection. Paraburkholderia members form a monophyletic clade within the Burkholderiaceae family, which is what prompted their distinction as a genus independent from Burkholderia species, in combination with the finding of robust conserved signature indels which are unique to Paraburkholderia species, and are lacking in members of the genus Burkholderia. These CSIs distinguish the genus from all other bacteria. Additionally, the CSIs that were found to be shared by Burkholderia species are absent in Paraburkholderia, providing evidence of separate lineages.
Caballeronia is a genus of bacteria from the family of Burkholderiaceae which has been reported to perform biological nitrogen fixation and promote plant growth