FBXO6

FBXO6
Identifiers
Aliases	FBXO6 , FBG2, FBS2, FBX6, Fbx6b, F-box protein 6
External IDs	OMIM: 605647 MGI: 1354743 HomoloGene: 9274 GeneCards: FBXO6
Gene location (Human) Chr. Chromosome 1 (human) [1] Band 1p36.22 Start 11,664,200 bp [1] End 11,674,354 bp [1]
Gene location (Mouse) Chr. Chromosome 4 (mouse) [2] Band 4 E2|4 78.67 cM Start 148,230,173 bp [2] End 148,236,597 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in monocyte gastrocnemius muscle bronchial epithelial cell blood right lobe of liver right adrenal gland right uterine tube pancreatic ductal cell appendix left adrenal gland Top expressed in urinary bladder adrenal gland muscle tissue skeletal muscle tissue quadriceps femoris muscle placenta white adipose tissue lip ileum islet of Langerhans More reference expression data BioGPS n/a
Gene ontology Molecular function ubiquitin protein ligase activity carbohydrate binding ubiquitin-protein transferase activity protein binding Cellular component cytoplasm SCF ubiquitin ligase complex endoplasmic reticulum quality control compartment cytosol Biological process cellular response to DNA damage stimulus DNA damage checkpoint signaling SCF-dependent proteasomal ubiquitin-dependent protein catabolic process response to unfolded protein DNA repair protein ubiquitination proteolysis ubiquitin-dependent ERAD pathway glycoprotein catabolic process protein polyubiquitination post-translational protein modification Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 26270 50762 Ensembl ENSG00000116663 ENSMUSG00000055401 UniProt Q9NRD1 Q9QZN4 RefSeq (mRNA) NM_018438 NM_001163704 NM_001163705 NM_001163706 NM_001163707 NM_015797 RefSeq (protein) NP_060908 NP_001157176 NP_001157177 NP_001157178 NP_001157179 NP_056612 Location (UCSC) Chr 1: 11.66 – 11.67 Mb Chr 4: 148.23 – 148.24 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

F-box only protein 6 is a protein that in humans is encoded by the FBXO6 gene. ^{[5] [6] [7]}

This gene encodes a member of the F-box protein family which is characterized by an approximately 40 amino acid motif, the F-box. The F-box proteins constitute one of the four subunits of the ubiquitin protein ligase complex called SCFs (SKP1-cullin-F-box), which function in phosphorylation-dependent ubiquitination. The F-box proteins are divided into 3 classes: Fbws containing WD-40 domains, Fbls containing leucine-rich repeats, and Fbxs containing either different protein-protein interaction modules or no recognizable motifs. The protein encoded by this gene belongs to the Fbxs class, and its C-terminal region is highly similar to that of rat NFB42 (neural F Box 42 kDa) which may be involved in the control of the cell cycle. ^[7]

References

1. GRCh38: Ensembl release 89: ENSG00000116663 - Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000055401 - Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Cenciarelli C, Chiaur DS, Guardavaccaro D, Parks W, Vidal M, Pagano M (Dec 1999). "Identification of a family of human F-box proteins". Curr Biol. 9 (20): 1177–9. doi: 10.1016/S0960-9822(00)80020-2 . PMID   10531035. S2CID   7467493.
6. Ilyin GP, Rialland M, Pigeon C, Guguen-Guillouzo C (Nov 2000). "cDNA cloning and expression analysis of new members of the mammalian F-box protein family". Genomics. 67 (1): 40–7. doi:10.1006/geno.2000.6211. PMID   10945468.
7. "Entrez Gene: FBXO6 F-box protein 6".

Further reading

• Gregory SG, Barlow KF, McLay KE, et al. (2006). "The DNA sequence and biological annotation of human chromosome 1". Nature. 441 (7091): 315–21. Bibcode:2006Natur.441..315G. doi: 10.1038/nature04727 . PMID   16710414.
• Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC   528928 . PMID   15489334.
• Yoshida Y, Tokunaga F, Chiba T, et al. (2003). "Fbs2 is a new member of the E3 ubiquitin ligase family that recognizes sugar chains". J. Biol. Chem. 278 (44): 43877–84. doi: 10.1074/jbc.M304157200 . PMID   12939278.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi: 10.1073/pnas.242603899 . PMC   139241 . PMID   12477932.
• Ilyin GP, Sérandour AL, Pigeon C, et al. (2003). "A new subfamily of structurally related human F-box proteins". Gene. 296 (1–2): 11–20. doi:10.1016/S0378-1119(02)00867-3. PMID   12383498.
• Winston JT, Koepp DM, Zhu C, et al. (1999). "A family of mammalian F-box proteins". Curr. Biol. 9 (20): 1180–2. doi: 10.1016/S0960-9822(00)80021-4 . PMID   10531037. S2CID   14341845.