FRG1

Last updated
FRG1
Available structures
PDB Ortholog search: PDBe RCSB
Identifiers
Aliases FRG1 , FRG1A, FSG1, FSHD region gene 1
External IDs OMIM: 601278 MGI: 893597 HomoloGene: 3295 GeneCards: FRG1
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_004477

NM_013522

RefSeq (protein)

NP_004468

NP_038550

Location (UCSC) Chr 4: 189.94 – 189.96 Mb Chr 8: 41.85 – 41.87 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Protein FRG1 is an actin-bundling protein [5] that in humans is encoded by the FRG1 gene. [6] [7]

This gene maps to a location 100 kb centromeric of the repeat units on chromosome 4q35 which are deleted in facioscapulohumeral muscular dystrophy (FSHD). It is evolutionarily conserved [8] and has related sequences on multiple human chromosomes but DNA sequence analysis did not reveal any homology to known genes. In vivo studies demonstrate the encoded protein is localized to the nucleolus. [7] Mice that overexpress FRG1 display facioscapulohumeral muscular dystrophy. Gabellili et al. suggest that human facioscapulohumeral muscular dystrophy results from overexpression of FRG1 in "skeletal muscle, which leads to abnormal alternative splicing of specific pre-mRNAs." [9] This result has been replicated in tadpoles. [10]

Related Research Articles

Facioscapulohumeral muscular dystrophy Medical condition

Facioscapulohumeral muscular dystrophy (FSHD) is a type of muscular dystrophy, a group of heritable diseases that cause degeneration of muscle and progressive weakness. Per the name, FSHD tends to sequentially weaken the muscles of the face, those that position the scapula, and those overlying the humerus bone of the upper arm. These areas can be spared, and muscles of other areas usually are affected, especially those of the chest, spine, abdomen, and shin. Almost any skeletal muscle can be affected in severe disease. Abnormally positioned, or winged, scapulas are common, as is the inability to lift the foot, known as foot drop. The two sides of the body are often affected unequally. Weakness typically manifests at ages 15 – 30 years. FSHD can also cause hearing loss and blood vessel abnormalities in the back of the eye.

Utrophin

Utrophin is a protein that in humans is encoded by the UTRN gene.

Palladin

Palladin is a protein that in humans is encoded by the PALLD gene. Palladin is a component of actin-containing microfilaments that control cell shape, adhesion, and contraction.

Fukutin Mammalian protein found in Homo sapiens

Fukutin is a eukaryotic protein necessary for the maintenance of muscle integrity, cortical histogenesis, and normal ocular development. Mutations in the fukutin gene have been shown to result in Fukuyama congenital muscular dystrophy (FCMD) characterised by brain malformation - one of the most common autosomal-recessive disorders in Japan. In humans this protein is encoded by the FCMD gene, located on chromosome 9q31. Human fukutin exhibits a length of 461 amino acids and a predicted molecular mass of 53.7 kDa.

Laminin, alpha 2

Laminin subunit alpha-2 is a protein that in humans is encoded by the LAMA2 gene.

Collagen, type VI, alpha 2 Mammalian protein found in Homo sapiens

Collagen alpha-2(VI) chain is a protein that in humans is encoded by the COL6A2 gene.

SGCE

Epsilon-sarcoglycan is a protein that in humans is encoded by the SGCE gene.

CDC42BPA Protein-coding gene in the species Homo sapiens

Serine/threonine-protein kinase MRCK alpha is an enzyme that in humans is encoded by the CDC42BPA gene.

Ligand-dependent nuclear receptor-interacting factor 1 Protein-coding gene in the species Homo sapiens

Ligand-dependent nuclear receptor-interacting factor 1 (LRIF1) also known as receptor-interacting factor 1 (RIF1) is a protein that in humans is encoded by the LRIF1 gene.

DIDO1 Protein-coding gene in the species Homo sapiens

Death-inducer obliterator 1 is a protein that in humans is encoded by the DIDO1 gene.

ZNF146 Protein-coding gene in the species Homo sapiens

Zinc finger protein OZF is a protein that in humans is encoded by the ZNF146 gene.

TRIM32

Tripartite motif-containing protein 32 is a protein that in humans is encoded by the TRIM32 gene. Since its discovery in 1995, TRIM32 has been shown to be implicated in a number of diverse biological pathways.

Myoferlin

Myoferlin is a protein that in humans is encoded by the MYOF gene.

POMT2

Protein O-mannosyl-transferase 2 is an enzyme that in humans is encoded by the POMT2 gene.

TOR1AIP1 Protein-coding gene in the species Homo sapiens

Torsin-1A-interacting protein 1 is a protein that in humans is encoded by the TOR1AIP1 gene. More commonly known as lamina associated polypeptide 1 (LAP1), it is a type II integral membrane protein that resides in the inner nuclear membrane. The luminal domain of LAP1 interacts with Torsin A and is necessary for the ATPase activity of Torsin A. LAP1 plays a critical role in skeletal and heart muscle. Mutations in TOR1AIP1 have been linked to muscular dystrophy and cardiomyopathy. It's deletion from mouse hepatocytes leads to defected very-low density lipoprotein secretion and causes non-alcoholic fatty liver disease and non-alcoholic steatohepatitis

ASH1L

ASH1L is a histone-lysine N-methyltransferase enzyme encoded by the ASH1L gene located at chromosomal band 1q22. ASH1L is the human homolog of Drosophila Ash1.

LRRN2 Protein-coding gene in the species Homo sapiens

Leucine-rich repeat neuronal protein 2 is a protein that in humans is encoded by the LRRN2 gene.

KCNV2 Protein-coding gene in the species Homo sapiens

Potassium voltage-gated channel subfamily V member 2 is a protein that in humans is encoded by the KCNV2 gene. The protein encoded by this gene is a voltage-gated potassium channel subunit.

DUX4

Double homeobox, 4 also known as DUX4 is a protein which in humans is encoded by the DUX4 gene. Its misexpression is the cause of facioscapulohumeral muscular dystrophy (FSHD).

SMCHD1

Structural Maintenance of Chromosomes flexible Hinge Domain Containing 1 (SMCHD1) is a protein that in humans is encoded by the SMCHD1 gene. Mutations in SMCHD1 are causative for development of facioscapulohumeral muscular dystrophy type 2 (FSHD2) and Bosma arhinia microphthalmia syndrome (BAMS).

References

  1. 1 2 3 ENSG00000283153, ENSG00000109536, ENSG00000283630 GRCh38: Ensembl release 89: ENSG00000275145, ENSG00000283153, ENSG00000109536, ENSG00000283630 - Ensembl, May 2017
  2. 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000031590 - Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Liu, Qian; Jones, Takako Iida; Tang, Vivian W.; Brieher, William M.; Jones, Peter L. (2010-04-01). "Facioscapulohumeral muscular dystrophy region gene-1 (FRG-1) is an actin-bundling protein associated with muscle-attachment sites". Journal of Cell Science. 123 (7): 1116–1123. doi:10.1242/jcs.058958. ISSN   0021-9533. PMC   2844320 . PMID   20215405.
  6. van Deutekom JC, Lemmers RJ, Grewal PK, van Geel M, Romberg S, Dauwerse HG, Wright TJ, Padberg GW, Hofker MH, Hewitt JE, Frants RR (Jun 1997). "Identification of the first gene (FRG1) from the FSHD region on human chromosome 4q35". Hum Mol Genet. 5 (5): 581–90. doi: 10.1093/hmg/5.5.581 . PMID   8733123.
  7. 1 2 "Entrez Gene: FRG1 FSHD region gene 1".
  8. Grewal, Prabhjit K.; Carim Todd, Laura; Van Der Maarel, Silvere; Frants, Rune R.; Hewitt, Jane E. (1998-08-17). "FRG1, a gene in the FSH muscular dystrophy region on human chromosome 4q35, is highly conserved in vertebrates and invertebrates". Gene. 216 (1): 13–19. doi:10.1016/S0378-1119(98)00334-5. ISSN   0378-1119. PMID   9714712.
  9. Gabellini, Davide; D'Antona, Giuseppe; Moggio, Maurizio; Prelle, Alessandro; Zecca, Chiara; Adami, Raffaella; Angeletti, Barbara; Ciscato, Patrizia; Pellegrino, Maria Antonietta; Bottinelli, Roberto; Green, Michael R. (February 2006). "Facioscapulohumeral muscular dystrophy in mice overexpressing FRG1". Nature. 439 (7079): 973–977. Bibcode:2006Natur.439..973G. doi:10.1038/nature04422. ISSN   1476-4687. PMID   16341202. S2CID   4427465.
  10. Hanel, Meredith L.; Wuebbles, Ryan D.; Jones, Peter L. (June 2009). "Muscular dystrophy candidate gene FRG1 is critical for muscle development". Developmental Dynamics. 238 (6): 1502–1512. doi:10.1002/dvdy.21830. ISSN   1058-8388. PMC   2964887 . PMID   19097195.

Further reading