Figshare

Last updated
figshare
Figshare logo.svg
Owner Digital Science
Created byMark Hahnel
URL figshare.com
CommercialYes
Launched2011
Current statusActive

Figshare is an online open access repository where researchers can preserve and share their research outputs, including figures, datasets, images, and videos. [1] It is free to upload content and free to access, in adherence to the principle of open data. Figshare is one of a number of portfolio businesses supported by Digital Science, [2] a subsidiary of Springer Nature. [3]

Contents

History

Figshare was launched in January 2011 by Mark Hahnel [4] and has been supported by Digital Science since a January 2012 relaunch. [2] Hahnel first developed the platform as a personal custom solution for the organization and publication of diverse research products generated in support of his PhD in stem cell biology. [2] In January 2013, Figshare announced a partnership with PLOS to integrate Figshare data hosting, access, and visualization with their associated PLOS articles. [5] In September 2013, the service launched a hosted institutional repository service. [1] In December 2013, they announced integration with ImpactStory to support the collection of altmetrics. [6]

Figshare also hosts the Reproducibility Collection as a founding member of The Reproducibility Initiative, which acts as an independent and blinded validator for replication of submitted data. [7]

Figshare releases 'The State of Open Data' each year to assess the changing academic landscape around open research.

Concept

Researchers can upload all of their research outputs to Figshare, thus making them publicly available. Users can upload files in any format, [8] and items are attributed a DOI. The current 'types' that can be chosen are figures, datasets, media (including video), papers (including pre-prints), posters, code, and filesets (groups of files). [9] All files are released under a Creative Commons license, CC-BY for most files and CC0 (public domain) for datasets. [1] [10] Figshare allows researchers to publish negative data. [4] [8] The withholding of negative publications is a widely known phenomenon that leads to a significant bias, often referred to as the file drawer effect. [11] By encouraging publishing of figures, charts, and data, rather than being limited to the traditional entire 'paper', knowledge can be shared more quickly and effectively. Figshare also tracks the download statistics for hosted materials, acting in turn as a source for altmetrics. [2] The main hosting mechanism for the platform is Amazon S3, with CLOCKSS [12] serving as an additional host for public content. [1] Both of these resources support backup and preservation via a distributed cloud computing network.

Integration with other platforms

Figshare features integration with ORCID, [13] Symplectic Elements, [14] [15] can import items from GitHub, [16] and is a source tracked by Altmetric.com. [17]

See also

Related Research Articles

Scientometrics is the field of study which concerns itself with measuring and analysing scholarly literature. Scientometrics is a sub-field of informetrics. Major research issues include the measurement of the impact of research papers and academic journals, the understanding of scientific citations, and the use of such measurements in policy and management contexts. In practice there is a significant overlap between scientometrics and other scientific fields such as information systems, information science, science of science policy, sociology of science, and metascience. Critics have argued that over-reliance on scientometrics has created a system of perverse incentives, producing a publish or perish environment that leads to low-quality research.

<span class="mw-page-title-main">Galaxy (computational biology)</span>

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming or systems administration experience. Although it was initially developed for genomics research, it is largely domain agnostic and is now used as a general bioinformatics workflow management system.

ResearcherID is an identifying system for scientific authors. The system was introduced in January 2008 by Thomson Reuters Corporation.

<span class="mw-page-title-main">ORCID</span> Code to uniquely identify scientific and other academic authors

The ORCID is a nonproprietary alphanumeric code to uniquely identify authors and contributors of scholarly communication as well as ORCID's website and services to look up authors and their bibliographic output.

<span class="mw-page-title-main">OCRFeeder</span>

OCRFeeder is an optical character recognition suite for GNOME, which also supports virtually any command-line OCR engine, such as CuneiForm, GOCR, Ocrad and Tesseract. It converts paper documents to digital document files and can serve to make them accessible to visually impaired users.

<span class="mw-page-title-main">Dryad (repository)</span>

Dryad is an international open-access repository of research data, especially data underlying scientific and medical publications. Dryad is a curated general-purpose repository that makes data discoverable, freely reusable, and citable. The scientific, educational, and charitable mission of Dryad is to provide the infrastructure for and promote the re-use of scholarly research data.

Open scientific data or open research data is a type of open data focused on publishing observations and results of scientific activities available for anyone to analyze and reuse. A major purpose of the drive for open data is to allow the verification of scientific claims, by allowing others to look at the reproducibility of results, and to allow data from many sources to be integrated to give new knowledge.

<span class="mw-page-title-main">OpenRefine</span> Application for data cleanup and data transformation

OpenRefine is an open-source desktop application for data cleanup and transformation to other formats, an activity commonly known as data wrangling. It is similar to spreadsheet applications, and can handle spreadsheet file formats such as CSV, but it behaves more like a database.

<span class="mw-page-title-main">Altmetrics</span> Alternative metrics for analyzing scholarship

In scholarly and scientific publishing, altmetrics are non-traditional bibliometrics proposed as an alternative or complement to more traditional citation impact metrics, such as impact factor and h-index. The term altmetrics was proposed in 2010, as a generalization of article level metrics, and has its roots in the #altmetrics hashtag. Although altmetrics are often thought of as metrics about articles, they can be applied to people, journals, books, data sets, presentations, videos, source code repositories, web pages, etc.

OurResearch, formerly known as ImpactStory, is a nonprofit organization that creates and distributes tools and services for libraries, institutions and researchers. The organization follows open practices with their data, code, and governance. OurResearch is funded by the Alfred P. Sloan Foundation, the National Science Foundation, and Arcadia Fund.

In computing, a Research Object is a method for the identification, aggregation and exchange of scholarly information on the Web. The primary goal of the research object approach is to provide a mechanism to associate related resources about a scientific investigation so that they can be shared using a single identifier. As such, research objects are an advanced form of Enhanced publication.

Data publishing is the act of releasing research data in published form for use by others. It is a practice consisting in preparing certain data or data set(s) for public use thus to make them available to everyone to use as they wish. This practice is an integral part of the open science movement. There is a large and multidisciplinary consensus on the benefits resulting from this practice.

<span class="mw-page-title-main">University of Cape Town Libraries</span> Library system of the University of Cape Town

University of Cape Town Libraries is the library system of the University of Cape Town in Cape Town, South Africa.

<span class="mw-page-title-main">Publons</span> Website for researchers to share and receive credit for peer review activity

Publons was a commercial website that provided a free service for academics to track, verify, and showcase their peer review and editorial contributions for academic journals. It was launched in 2012 and was bought by Clarivate in 2017. It claimed that over 3,000,000 researchers joined the site, adding more than one million reviews across 25,000 journals. In 2019, ResearcherID was integrated with Publons.

<span class="mw-page-title-main">Altmetric</span>

Altmetric, or altmetric.com, is a data science company that tracks where published research is mentioned online, and provides tools and services to institutions, publishers, researchers, funders and other organisations to monitor this activity, commonly referred to as altmetrics. Altmetric was recognized by European Commissioner Máire Geoghegan-Quinn in 2014 as a company challenging the traditional reputation systems.

Authorea is an online collaborative writing tool that allows researchers to write, cite, collaborate, host data and publish. It has been described as "Google Docs for Scientists". It has been owned by the commercial publishing company Wiley through Atypon since 2018.

<span class="mw-page-title-main">Zenodo</span> Research data repository

Zenodo is a general-purpose open repository developed under the European OpenAIRE program and operated by CERN. It allows researchers to deposit research papers, data sets, research software, reports, and any other research related digital artefacts. For each submission, a persistent digital object identifier (DOI) is minted, which makes the stored items easily citeable.

Open energy system database projects employ open data methods to collect, clean, and republish energy-related datasets for open use. The resulting information is then available, given a suitable open license, for statistical analysis and for building numerical energy system models, including open energy system models. Permissive licenses like Creative Commons CC0 and CC BY are preferred, but some projects will house data made public under market transparency regulations and carrying unqualified copyright.

Datacommons.org is an open knowledge graph hosted by Google that provides a unified view across multiple public datasets, combining economic, scientific and other open datasets into an integrated data graph. The Datacommons.org site was launched in May 2018 with an initial dataset consisting of fact-checking data published in Schema.org "ClaimReview" format by several fact checkers from the International Fact-Checking Network. Google has worked with partners including the United States Census, the World Bank, and US Bureau of Labor Statistics to populate the repository, which also hosts data from Wikipedia, the National Oceanic and Atmospheric Administration and the Federal Bureau of Investigation. The service expanded during 2019 to include an RDF-style Knowledge Graph populated from a number of largely statistical open datasets. The service was announced to a wider audience in 2019. In 2020 the service improved its coverage of non-US datasets, while also increasing its coverage of bioinformatics and coronavirus.

<span class="mw-page-title-main">Data Version Control (software)</span>

DVC is a free and open-source, platform-agnostic version system for data, machine learning models, and experiments. It is designed to make ML models shareable, experiments reproducible, and to track versions of models, data, and pipelines. DVC works on top of Git repositories and cloud storage.

References

  1. 1 2 3 4 Hane, Paula. "Sharing Research Data—New figshare For Institutions". Against the Grain.
  2. 1 2 3 4 Piwowar, Heather (10 January 2013). "Altmetrics: Value all research products" (PDF). Nature. 493 (7431): 159. Bibcode:2013Natur.493..159P. doi: 10.1038/493159a . PMID   23302843. S2CID   205075867.
  3. Today, Information (2010-12-09). "Macmillan Announces Release of Digital Science". newsbreaks.infotoday.com. Retrieved 2022-02-04.
  4. 1 2 Fenner, Martin. "Figshare: Interview with Mark Hahnel". PLoS Blogs. Archived from the original on 25 July 2013. Retrieved 19 June 2013.
  5. Kishor, Puneet (31 January 2013). "PLOS and figshare make open science publishing more open". Creative Commons. Retrieved 19 June 2013.
  6. "ImpactStory adds figshare integration". Research Information. 3 December 2013. Retrieved 1 January 2014.
  7. Hooijmans, CR; Ritskes-Hoitinga, M (2013-07-16). "Progress in Using Systematic Reviews of Animal Studies to Improve Translational Research". PLOS Med. 10 (7): e1001482. doi: 10.1371/journal.pmed.1001482 . PMC   3712909 . PMID   23874162.
  8. 1 2 Hahnel, Mark. "Figshare: a new way to publish scientific research data". Wellcome Trust Blog. Archived from the original on 14 April 2014. Retrieved 19 June 2013.
  9. "FAQ". figshare. Archived from the original on 16 April 2015. Retrieved 21 June 2013.
  10. "FAQ". figshare. Archived from the original on 16 April 2015. Retrieved 19 June 2013.
  11. Singh, Jatinder (Apr–Jun 2011). "FigShare". Journal of Pharmacology & Pharmacotherapeutics. 2 (2): 138–139. doi: 10.4103/0976-500X.81919 . PMC   3127351 . PMID   21772785.
  12. "CLOCKSS". clockss.org.
  13. "figshare ORCID integration". Figshare. Retrieved 7 May 2014.
  14. "Elements". Symplectic. Archived from the original on 2019-05-09. Retrieved 2019-05-09.
  15. Hyndman, Alan (6 December 2017). "Figshare and Symplectic Offer New Integration to Improve Institutional Workflows". Figshare.
  16. Hyndman, Alan (17 July 2016). "figshare launches revamped GitHub integration". Figshare.
  17. "Over 2.5 million research outputs deposited on Figshare will now display Altmetric Badges, ushering in a new era of data level metrics". Altmetric. 28 April 2016.

Commons-logo.svg Media related to Figshare at Wikimedia Commons