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Thiobacillus is a genus of Gram-negative Betaproteobacteria. Thiobacillus thioparus is the type species of the genus, and the type strain thereof is the StarkeyT strain, isolated by Robert Starkey in the 1930s from a field at Rutgers University in the United States of America. While over 30 "species" have been named in this genus since it was defined by Martinus Beijerinck in 1904,, most names were never validly or effectively published. The remainder were either reclassified into Paracoccus, Starkeya ; Sulfuriferula, Annwoodia, Thiomonas ; Halothiobacillus, Guyparkeria, or Thermithiobacillus or Acidithiobacillus. The very loosely defined "species" Thiobacillus trautweinii was where sulfur oxidising heterotrophs and chemolithoheterotrophs were assigned in the 1910-1960s era, most of which were probably Pseudomonas species. Many species named in this genus were never deposited in service collections and have been lost.
Halomonadaceae is a family of halophilic Proteobacteria.
The Acidithiobacillales are an order of bacteria within the class Acidithiobacillia and comprises the genera Acidithiobacillus and Thermithiobacillus. Originally, both were included in the genus Thiobacillus, but they are not related to the type species, which belongs to the Betaproteobacteria.
Acidithiobacillus is a genus of the Acidithiobacillia in the "Proteobacteria". The genus includes acidophilic organisms capable of iron and/or sulfur oxidation. Like all "Proteobacteria", Acidithiobacillus spp. are Gram-negative. They are also important generators of acid mine drainage, which is a major environmental problem around the world in mining.
Halothiobacillus is a genus in the Gammaproteobacteria. Both species are obligate aerobic bacteria; they require oxygen to grow. They are also halotolerant; they live in environments with high concentrations of salt or other solutes, but don't require them in order to grow.
Thermithiobacillus is a genus of nonsporeforming, rod-shaped, Gram-negative bacteria. The name derives from the Latin thermae, for warm baths, and the Classical Greek θείος, theios for sulfur. The type species of this genus was previously assigned to the genus Thiobacillus, but it was reclassified on the basis of 16S rRNA analysis in 2000, creating this genus.
The Halothiobacillaceae are a family of halotolerant, mesophilic, and obligate chemolithoautotrophic organisms in the Chromatiales comprising the genus Halothiobacillus. It is closely related to the family Thioalkalibacteraceae of halophilic obligate autotrophs with distinct morphological and genomic features.
Sulfur-reducing bacteria are microorganisms able to reduce elemental sulfur (S0) to hydrogen sulfide (H2S). These microbes use inorganic sulfur compounds as electron acceptors to sustain several activities such as respiration, conserving energy and growth, in absence of oxygen. The final product or these processes, sulfide, has a considerable influence on the chemistry of the environment and, in addition, is used as electron donor for a large variety of microbial metabolisms. Several types of bacteria and many non-methanogenic archaea can reduce sulfur. Microbial sulfur reduction was already shown in early studies, which highlighted the first proof of S0 reduction in a vibrioid bacterium from mud, with sulfur as electron acceptor and H2 as electron donor. The first pure cultured species of sulfur-reducing bacteria, Desulfuromonas acetoxidans, was discovered in 1976 and described by Pfennig Norbert and Biebel Hanno as an anaerobic sulfur-reducing and acetate-oxidizing bacterium, not able to reduce sulfate. Only few taxa are true sulfur-reducing bacteria, using sulfur reduction as the only or main catabolic reaction. Normally, they couple this reaction with the oxidation of acetate, succinate or other organic compounds. In general, sulfate-reducing bacteria are able to use both sulfate and elemental sulfur as electron acceptors. Thanks to its abundancy and thermodynamic stability, sulfate is the most studied electron acceptor for anaerobic respiration that involves sulfur compounds. Elemental sulfur, however, is very abundant and important, especially in deep-sea hydrothermal vents, hot springs and other extreme environments, making its isolation more difficult. Some bacteria – such as Proteus, Campylobacter, Pseudomonas and Salmonella – have the ability to reduce sulfur, but can also use oxygen and other terminal electron acceptors.
Thauera is a genus of Gram-negative bacteria in the family Zoogloeaceae of the order Rhodocyclales of the Betaproteobacteria. The genus is named for the German microbiologist Rudolf Thauer. Most species of this genus are motile by flagella and are mostly rod-shaped. The species occur in wet soil and polluted freshwater.
Thermithiobacillus tepidarius is a member of the Acidithiobacillia isolated from the thermal groundwaters of the Roman Baths at Bath, Somerset, United Kingdom. It was previously placed in the genus Thiobacillus. The organism is a moderate thermophile, 43–45 °C (109–113 °F), and an obligate aerobic chemolithotrophic autotroph. Despite having an optimum pH of 6.0–7.5, growth can continue to an acid medium of pH 4.8. Growth can only occur on reduced inorganic sulfur compounds and elementary sulfur, but unlike some species in other genus of the same family, Acidithiobacillus, Thermithiobacillus spp. are unable to oxidise ferrous iron or iron-containing minerals.
The outflow of acidic liquids and other pollutants from mines is often catalysed by acid-loving microorganisms; these are the acidophiles in acid mine drainage.
Arcobacter is a genus of Gram-negative, spiral-shaped bacteria in the phylum Campylobacterota. It shows an unusually wide range of habitats, and some species can be human and animal pathogens. Species of the genus Arcobacter are found in both animal and environmental sources, making it unique among the Campylobacterota. This genus currently consists of five species: A. butzleri, A. cryaerophilus, A. skirrowii, A. nitrofigilis, and A. sulfidicus, although several other potential novel species have recently been described from varying environments. Three of these five known species are pathogenic. Members of this genus were first isolated in 1977 from aborted bovine fetuses. They are aerotolerant, Campylobacter-like organisms, previously classified as Campylobacter. The genus Arcobacter, in fact, was created as recently as 1992. Although they are similar to this other genus, Arcobacter species can grow at lower temperatures than Campylobacter, as well as in the air, which Campylobacter cannot.
Thermoanaerobacter is a genus in the phylum Bacillota (Bacteria). Members of this genus are thermophilic and anaerobic, several of them were previously described as Clostridium species and members of the now obsolete genera Acetogenium and Thermobacteroides
Hydrogenovibrio crunogenus is a colorless, sulfur-oxidizing bacterium first isolated from a deep-sea hydrothermal vent. It is an obligate chemolithoautotrophic sulfur oxidizer and differs from other species of this genus by its DNA base composition and by its growth rate and optimal pH in thiosulfate medium. ATCC 35932T is the type strain of the species. It was originally published in the genus Thiomicrospira as Thiomicrospira crunogena but was reclassified to the genus Hydrogenovibrio in 2017, resulting a grammatical gender change of the specific epithet from crunogena to crunogenus. The genome sequence of H. crunogenus XCL-2 has been published but that of the type strain has not yet been undertaken.
The genus Annwoodia was named in 2017 to circumscribe an organism previously described as a member of the genus Thiobacillus, Thiobacillus aquaesulis - the type and only species is Annwoodia aquaesulis, which was isolated from the geothermal waters of the Roman Baths in the city of Bath in the United Kingdom by Ann P. Wood and Donovan P. Kelly of the University of Warwick - the genus was subsequently named to honour Wood's contribution to microbiology. The genus falls within the family Thiobacillaceae along with Thiobacillus and Sulfuritortus, both of which comprise autotrophic organisms dependent on thiosulfate, other sulfur oxyanions and sulfide as electron donors for chemolithoheterotrophic growth. Whilst Annwoodia spp. and Sulfuritortus spp. are thermophilic, Thiobacillus spp. are mesophilic.
The Thioalkalibacteraceae are a family of extremophiles, namely halophilic, alkaliphilic or alkalitolerant, mesophilic to thermophilic obligately chemolithoautotrophic organisms in the Chromatiales comprising the genus Thioalkalibacter and Guyparkeria. The family is closely related to the family Halothiobacillaceae of halotolerant, mesophilic obligate autotrophs.
Aquibacillus is a genus of bacteria from the family of Bacillaceae.
Ann Patricia Wood is a retired British biochemist and bacteriologist who specialized in the ecology, taxonomy and physiology of sulfur-oxidizing chemolithoautotrophic bacteria and how methylotrophic bacteria play a role in the degradation of odour causing compounds in the human mouth, vagina and skin. The bacterial genus Annwoodia was named to honor her contributions to microbial research in 2017.
Maledivibacter is a bacterial genus from the family of Clostridiaceae with one known species. Clostridium halophilum has been reclassified to Maledivibacter halophilus.
Paramaledivibacter is a strictly anaerobic, slightly halophilic, non-spore-forming and moderately thermophilic genus of bacteria from the family of Clostridiaceae with one known species. Clostridium caminithermale has been reclassified to Paramaledivibacter caminithermalis. Paramaledivibacter caminithermalis has been isolated from a deep-sea hydrothermal vent from the Atlantic Ocean Ridge.
References
- 1 2 3 4 Boden R (2017). "Reclassification of Halothiobacillus hydrothermalis and Halothiobacillus halophilus to Guyparkeria gen. nov. in the Thioalkalibacteraceae fam. nov., with emended descriptions of the genus Halothiobacillus and family Halothiobacillaceae". International Journal of Systematic and Evolutionary Microbiology. 67: 3919–3928. doi: 10.1099/ijsem.0.002222 . PMID 28884673 . Retrieved 9 December 2017.
- ↑ Wood AP, Kelly DP (1991). "Isolation and characterisation of Thiobacillus halophilus sp. nov., a sulfur-oxidising autotrophic eubacterium from a Western Australian hypersaline lake". Archives of Microbiology. 156: 277–280. doi:10.1007/BF00262998.
- ↑ Durand P, Reysenbach AL, Prieur D, Pace N (1993). "Isolation and characterization of Thiobacillus hydrothermalis sp. nov., a mesophilic obligately chemolithotrophic bacterium isolated from a deep-sea hydrothermal vent in Fiji Basin". Archives of Microbiology. 159: 39–44. doi:10.1007/BF00244261.
- ↑ Kelly, D.P., and Wood, A.P. "Reclassification of some species of Thiobacillus to the newly designated generus Acidithiobacillus gen. nov., Halothiobacillus gen. nov. and Thermithiobacillus gen. nov." Int. J. Syst. Evol. Microbiol. (2000) 50:489-500.