Identification (biology)

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Identifying moths

Identification in biology is the process of assigning a pre-existing taxon name to an individual organism. Identification of organisms to individual scientific names (or codes) may be based on individualistic natural body features, [1] experimentally created individual markers (e.g., color dot patterns), or natural individualistic molecular markers (similar to those used in maternity or paternity identification tests). Individual identification is used in ecology, wildlife management and conservation biology. The more common form of identification is the identification of organisms to common names (e. g., "lion") or scientific name (e. g., "Panthera leo"). By necessity this is based on inherited features ("characters") of the sexual organisms, the inheritance forming the basis of defining a class. The features may, e. g., be morphological, anatomical, physiological, behavioral, or molecular.

The term "determination" may occasionally be used as a synonym for identification (e. g.), [2] or as in "determination slips". [3]

Identification methods may be manual or computerized and may involve using identification keys, browsing through fields guide that contain (often illustrated) species accounts, comparing the organism with specimens from natural history collections, or taking images to be analyzed and compared against a pre-trained knowledge base with species information. [4]

See also

Related Research Articles

In molecular biology, restriction fragment length polymorphism (RFLP) is a technique that exploits variations in homologous DNA sequences, known as polymorphisms, in order to distinguish individuals, populations, or species or to pinpoint the locations of genes within a sequence.The term may refer to a polymorphism itself, as detected through the differing locations of restriction enzyme sites, or to a related laboratory technique by which such differences can be illustrated. In RFLP analysis, a DNA sample is digested into fragments by one or more restriction enzymes, and the resulting restriction fragments are then separated by gel electrophoresis according to their size.

Taxonomy (biology) Science of naming, defining and classifying organisms

In biology, taxonomy is the scientific study of naming, defining (circumscribing) and classifying groups of biological organisms based on shared characteristics. Organisms are grouped into taxa and these groups are given a taxonomic rank; groups of a given rank can be aggregated to form a more inclusive group of higher rank, thus creating a taxonomic hierarchy. The principal ranks in modern use are domain, kingdom, phylum, class, order, family, genus, and species. The Swedish botanist Carl Linnaeus is regarded as the founder of the current system of taxonomy, as he developed a ranked system known as Linnaean taxonomy for categorizing organisms and binominal nomenclature for naming organisms.

A microsatellite is a tract of repetitive DNA in which certain DNA motifs are repeated, typically 5–50 times. Microsatellites occur at thousands of locations within an organism's genome. They have a higher mutation rate than other areas of DNA leading to high genetic diversity. Microsatellites are often referred to as short tandem repeats (STRs) by forensic geneticists and in genetic genealogy, or as simple sequence repeats (SSRs) by plant geneticists.

Brydes whale

Bryde's whale, or the Bryde's whale complex, putatively comprises two species of rorqual and maybe three. The "complex" means the number and classification remains unclear because of a lack of definitive information and research. The common Bryde's whale is a larger form that occurs worldwide in warm temperate and tropical waters, and the Sittang or Eden's whale is a smaller form that may be restricted to the Indo-Pacific. Also, a smaller, coastal form of B. brydei is found off southern Africa, and perhaps another form in the Indo-Pacific differs in skull morphology, tentatively referred to as the Indo-Pacific Bryde's whale. The recently described Omura's whale, was formerly thought to be a pygmy form of Bryde's, but is now recognized as a distinct species.

Humpback whale A large baleen whale with long pectoral fins and a knobbly head

The humpback whale is a species of baleen whale. It is one of the larger rorqual species, with adults ranging in length from 12–16 m (39–52 ft) and weighing around 25–30 t. The humpback has a distinctive body shape, with long pectoral fins and a knobbly head. It is known for breaching and other distinctive surface behaviors, making it popular with whale watchers. Males produce a complex song lasting 10 to 20 minutes, which they repeat for hours at a time. All the males in a group will produce the same song, which is different each season. Its purpose is not clear, though it may help induce estrus in females.

Type (biology) Specimen(s) to which a scientific name is formally attached

In biology, a type is a particular specimen of an organism to which the scientific name of that organism is formally attached. In other words, a type is an example that serves to anchor or centralize the defining features of that particular taxon. In older usage, a type was a taxon rather than a specimen.

Forensic identification is the application of forensic science, or "forensics", and technology to identify specific objects from the trace evidence they leave, often at a crime scene or the scene of an accident. Forensic means "for the courts".

A molecular marker is a molecule contained within a sample taken from an organism or other matter. It can be used to reveal certain characteristics about the respective source. DNA, for example, is a molecular marker containing information about genetic disorders and the evolutionary history of life. Specific regions of the DNA are used for diagnosing the autosomal recessive genetic disorder cystic fibrosis, taxonomic affinity (phylogenetics) and identity. Further, life forms are known to shed unique chemicals, including DNA, into the environment as evidence of their presence in a particular location. Other biological markers, like proteins, are used in diagnostic tests for complex neurodegenerative disorders, such as Alzheimer's disease. Non-biological molecular markers are also used, for example, in environmental studies.

This glossary of genetics is a list of definitions of terms and concepts commonly used in the study of genetics and related disciplines in biology, including molecular biology and evolutionary biology. It is intended as introductory material for novices; for more specific and technical detail, see the article corresponding to each term. For related terms, see Glossary of evolutionary biology.

Body identification

Body identification is a subfield of forensic science that uses a variety of scientific and non-scientific methods to identify a body. Forensic purposes are served by rigorous scientific forensic identification techniques, but these are generally preceded by formal identification. This involves requesting a family member or friend of the victim to visually identify the body.

In biology, a species is the basic unit of classification and a taxonomic rank of an organism, as well as a unit of biodiversity. A species is often defined as the largest group of organisms in which any two individuals of the appropriate sexes or mating types can produce fertile offspring, typically by sexual reproduction. Other ways of defining species include their karyotype, DNA sequence, morphology, behaviour or ecological niche. In addition, paleontologists use the concept of the chronospecies since fossil reproduction cannot be examined.

DNA barcoding Method of species identification using a short section of DNA

DNA barcoding is a method of species identification using a short section of DNA from a specific gene or genes. The premise of DNA barcoding is that, by comparison with a reference library of such DNA sections, an individual sequence can be used to uniquely identify an organism to species, in the same way that a supermarket scanner uses the familiar black stripes of the UPC barcode to identify an item in its stock against its reference database. These "barcodes" are sometimes used in an effort to identify unknown species, parts of an organism, or simply to catalog as many taxa as possible, or to compare with traditional taxonomy in an effort to determine species boundaries.

Molecular cloning

Molecular cloning is a set of experimental methods in molecular biology that are used to assemble recombinant DNA molecules and to direct their replication within host organisms. The use of the word cloning refers to the fact that the method involves the replication of one molecule to produce a population of cells with identical DNA molecules. Molecular cloning generally uses DNA sequences from two different organisms: the species that is the source of the DNA to be cloned, and the species that will serve as the living host for replication of the recombinant DNA. Molecular cloning methods are central to many contemporary areas of modern biology and medicine.

Genetic engineering techniques

Genetic engineering can be accomplished using multiple techniques. There are a number of steps that are followed before a genetically modified organism (GMO) is created. Genetic engineers must first choose what gene they wish to insert, modify, or delete. The gene must then be isolated and incorporated, along with other genetic elements, into a suitable vector. This vector is then used to insert the gene into the host genome, creating a transgenic or edited organism. The ability to genetically engineer organisms is built on years of research and discovery on how genes function and how we can manipulate them. Important advances included the discovery of restriction enzymes and DNA ligases and the development of polymerase chain reaction and sequencing.

The history of wildlife tracking technology involves the evolution of technologies that have been used to monitor, track, and locate many different types of wildlife. Many individuals have an interest in tracking wildlife, including biologists, scientific researchers, and conservationists. Biotelemetry is "the instrumental technique for gaining and transmitting information from a living organism and its environment to a remote observer".

Outline of evolution Hierarchical outline list of articles related to evolution

The following outline is provided as an overview of and topical guide to evolution:

DNA barcoding is an alternative method to the traditional morphological taxonomic classification, and has frequently been used to identify species of aquatic macroinvertebrates. Many are crucial indicator organisms in the bioassessment of freshwater and marine ecosystems.

Microbial DNA barcoding is the use of meta DNA barcoding to characterize a mixture of microorganisms.

DNA barcoding methods for fish are used to identify groups of fish based on DNA sequences within selected regions of a genome. These methods can be used to study fish, as genetic material, in the form of environmental DNA (eDNA) or cells, is freely diffused in the water. This allows researchers to identify which species are present in a body of water by collecting a water sample, extracting DNA from the sample and isolating DNA sequences that are specific for the species of interest. Barcoding methods can also be used for biomonitoring and food safety validation, animal diet assessment, assessment of food webs and species distribution, and for detection of invasive species.

Genome sequencing of endangered species is the application of Next Generation Sequencing (NGS) technologies in the field of conservative biology, with the aim of generating life history, demographic and phylogenetic data of relevance to the management of endangered wildlife.

References

  1. D.Burns, P.Harrison and P. Baverstock. Photographic identification of individual humpback whales (Megaptera novaeangliae) on their southern migration past Ballina, NSW, with comparisons to other humpback whale databases from eastern Australia
  2. Osborne, Donald V. (1963). "Some aspects of the theory of dichotomous keys". New Phytologist. 62 (2): 144–160. doi: 10.1111/j.1469-8137.1963.tb06322.x .
  3. "The herbarium specimen". Archived from the original on 2008-07-24. Retrieved 2008-03-31.
  4. Wäldchen, Jana; Mäder, Patrick (2017-01-07). "Plant Species Identification Using Computer Vision Techniques: A Systematic Literature Review". Archives of Computational Methods in Engineering. 25 (2): 507–543. doi:10.1007/s11831-016-9206-z. ISSN   1134-3060. PMC   6003396 . PMID   29962832.