LZTFL1

Last updated
LZTFL1
Identifiers
Aliases LZTFL1 , BBS17, leucine zipper transcription factor like 1
External IDs OMIM: 606568 MGI: 1934860 HomoloGene: 41368 GeneCards: LZTFL1
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_001276378
NM_001276379
NM_020347
NM_001386451
NM_001386452

Contents

NM_033322

RefSeq (protein)

NP_001263307
NP_001263308
NP_065080

NP_201579

Location (UCSC) Chr 3: 45.82 – 45.92 Mb Chr 9: 123.52 – 123.55 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Leucine zipper transcription factor like 1 also known as LZTFL1 is a ubiquitously expressed protein which localizes to the cytoplasm and in humans is encoded by the LZTFL1 gene. [5]

Function

This protein regulates protein trafficking to the ciliary membrane through interaction with the Bardet-Biedl syndrome (BBS) complex of proteins. [6]

Clinical significance

Mutations in the LZTFL1 gene are associated with Bardet-Biedl syndrome, [7] and the gene also acts as a tumor suppressor [8] through regulation of epithelial-mesenchymal transition. [9]

Identified as the gene on chromosome 3 at location 3p21.31 responsible for mediating an associated with genetic susceptibility to SARS-CoV-2 infection [10] and COVID-19 respiratory failure. [11] [12] The DNA segment conferring the risk is inherited from Neanderthals. [13]

Related Research Articles

<span class="mw-page-title-main">Bardet–Biedl syndrome</span> Medical condition

Bardet–Biedl syndrome (BBS) is a ciliopathic human genetic disorder that produces many effects and affects many body systems. It is characterized by rod/cone dystrophy, polydactyly, central obesity, hypogonadism, and kidney dysfunction in some cases. Historically, slower mental processing has also been considered a principal symptom but is now not regarded as such.

<span class="mw-page-title-main">Smoothened</span> Protein-coding gene in the species Homo sapiens

Smoothened is a protein that in humans is encoded by the SMO gene. Smoothened is a Class Frizzled G protein-coupled receptor that is a component of the hedgehog signaling pathway and is conserved from flies to humans. It is the molecular target of the natural teratogen cyclopamine. It also is the target of vismodegib, the first hedgehog pathway inhibitor to be approved by the U.S. Food and Drug Administration (FDA).

<i>NRL</i> (gene) Protein-coding gene in the species Homo sapiens

Neural retina-specific leucine zipper protein is a protein that in humans is encoded by the NRL gene.

<i>MAFB</i> (gene) Protein-coding gene in the species Homo sapiens

Transcription factor MafB also known as V-maf musculoaponeurotic fibrosarcoma oncogene homolog B is a protein that in humans is encoded by the MAFB gene. This gene maps to chromosome 20q11.2-q13.1, consists of a single exon and spans around 3 kb.

<span class="mw-page-title-main">MKKS</span> Protein-coding gene in the species Homo sapiens

McKusick–Kaufman/Bardet–Biedl syndromes putative chaperonin is a protein that in humans is encoded by the MKKS gene.

<span class="mw-page-title-main">BBS1</span> Protein

Bardet–Biedl syndrome 1 protein is a protein that in humans is encoded by the BBS1 gene. BBS1 is part of the BBSome complex, which required for ciliogenesis. Mutations in this gene have been observed in patients with the major form of Bardet–Biedl syndrome.

<i>MLX</i> (gene) Protein-coding gene in the species Homo sapiens

Max-like protein X is a protein that in humans is encoded by the MLX gene.

<span class="mw-page-title-main">BBS5</span> Protein-coding gene in the species Homo sapiens

Bardet–Biedl syndrome 5 protein is a protein that in humans is encoded by the BBS5 gene.

<span class="mw-page-title-main">ARL6</span> Mammalian protein found in Homo sapiens

ADP-ribosylation factor-like protein 6 is a protein that in humans is encoded by the ARL6 gene.

<span class="mw-page-title-main">BBS2</span> Protein-coding gene in the species Homo sapiens

Bardet–Biedl syndrome 2 protein is a protein that in humans is encoded by the BBS2 gene.

<span class="mw-page-title-main">BBS4</span> Protein-coding gene in the species Homo sapiens

Bardet–Biedl syndrome 4 is a protein that in humans is encoded by the BBS4 gene.

<span class="mw-page-title-main">ARL4D</span> Protein-coding gene in the species Homo sapiens

ADP-ribosylation factor-like protein 4D is a protein that in humans is encoded by the ARL4D gene.

<span class="mw-page-title-main">Ciliopathy</span> Genetic disease resulting in abnormal formation or function of cilia

A ciliopathy is any genetic disorder that affects the cellular cilia or the cilia anchoring structures, the basal bodies, or ciliary function. Primary cilia are important in guiding the process of development, so abnormal ciliary function while an embryo is developing can lead to a set of malformations that can occur regardless of the particular genetic problem. The similarity of the clinical features of these developmental disorders means that they form a recognizable cluster of syndromes, loosely attributed to abnormal ciliary function and hence called ciliopathies. Regardless of the actual genetic cause, it is clustering of a set of characteristic physiological features which define whether a syndrome is a ciliopathy.

<span class="mw-page-title-main">TTC8</span> Protein-coding gene in the species Homo sapiens

Tetratricopeptide repeat domain 8 (TTC8) also known as Bardet–Biedl syndrome 8 is a protein that in humans is encoded by the TTC8 gene.

<span class="mw-page-title-main">BBS7</span> Protein-coding gene in the species Homo sapiens

Bardet–Biedl syndrome 7 is a protein that in humans is encoded by the BBS7 gene.

<span class="mw-page-title-main">BBS9</span> Gene of the species Homo sapiens

Bardet–Biedl syndrome 9 is a protein that in humans is encoded by the BBS9 gene.

<span class="mw-page-title-main">BBS10</span> Gene

Bardet–Biedl syndrome 10, also known as BBS10 is a human gene.

<span class="mw-page-title-main">MKS1</span> Protein-coding gene in the species Homo sapiens

Meckel syndrome, type 1 also known as MKS1 is a protein that in humans is encoded by the MKS1 gene.

A BBSome is a protein complex that operates in primary cilia biogenesis, homeostasis, and intraflagellar transport (IFT). The BBSome recognizes cargo proteins and signaling molecules like G-protein coupled receptors (GPCRs) on the ciliary membrane and helps transport them to and from the primary cilia. Primary cilia are nonmotile microtubule projections that function like antennae and are found in many types of cells. They receive various environmental signals to aid the cell in survival. They can detect photons by concentrating rhodopsin, a light receptor that converts photons into chemical signals, or odorants by concentrating olfactory receptors on the primary cilia surface. Primary cilia are also meaningful in cell development and signaling. They do not contain any way to make proteins within the primary cilia, so the BBSome aids in transporting essential proteins to, from, and within the cilia. Examples of cargo proteins that the BBSome is responsible for ferrying include smoothened, polycystic-1 (PC1), and several G-Protein coupled receptors (GPCRs) like somatostatin receptors (Sstr3), melanin-concentrating hormone receptor 1 (Mchr1), and neuropeptide Y2 receptor.

<span class="mw-page-title-main">C6orf163</span> Human gene

C6orf163 is a human protein encoded by the C6orf163 gene.

References

  1. 1 2 3 GRCh38: Ensembl release 89: ENSG00000163818 - Ensembl, May 2017
  2. 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000025245 - Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. "LZTFL1 leucine zipper transcription factor like 1 [Homo sapiens (human)] - Gene - NCBI". www.ncbi.nlm.nih.gov. Retrieved 2021-08-17.
  6. Seo S, Zhang Q, Bugge K, Breslow DK, Searby CC, Nachury MV, Sheffield VC (November 2011). "A novel protein LZTFL1 regulates ciliary trafficking of the BBSome and Smoothened". PLOS Genetics. 7 (11): e1002358. doi: 10.1371/journal.pgen.1002358 . PMC   3207910 . PMID   22072986.
  7. Marion V, Stutzmann F, Gérard M, De Melo C, Schaefer E, Claussmann A, et al. (May 2012). "Exome sequencing identifies mutations in LZTFL1, a BBSome and smoothened trafficking regulator, in a family with Bardet--Biedl syndrome with situs inversus and insertional polydactyly". Journal of Medical Genetics. 49 (5): 317–321. doi:10.1136/jmedgenet-2012-100737. PMID   22510444. S2CID   33467850.
  8. Kiss H, Kedra D, Kiss C, Kost-Alimova M, Yang Y, Klein G, et al. (April 2001). "The LZTFL1 gene is a part of a transcriptional map covering 250 kb within the common eliminated region 1 (C3CER1) in 3p21.3". Genomics. 73 (1): 10–19. doi:10.1006/geno.2000.6498. PMID   11352561.
  9. Wei Q, Zhou W, Wang W, Gao B, Wang L, Cao J, Liu ZP (April 2010). "Tumor-suppressive functions of leucine zipper transcription factor-like 1". Cancer Research. 70 (7): 2942–2950. doi:10.1158/0008-5472.CAN-09-3826. PMC   2848875 . PMID   20233871.
  10. Niemi, Mari E. K.; et al. (July 2021). "Mapping the human genetic architecture of COVID-19". Nature. 600 (7889): 472–477. doi:10.1038/s41586-021-03767-x. PMC   8674144 . PMID   34237774. S2CID   235776838.
  11. Ellinghaus D, Degenhardt F, Bujanda L, Buti M, Albillos A, Invernizzi P, et al. (October 2020). "Genomewide Association Study of Severe Covid-19 with Respiratory Failure". The New England Journal of Medicine. 383 (16): 1522–1534. doi:10.1056/NEJMoa2020283. PMC   7315890 . PMID   32558485.
  12. Downes DJ, Cross AR, Hua P, Roberts N, Schwessinger R, Cutler AJ, Munis AM, Brown J, Mielczarek O, de Andrea CE, Melero I (2021-11-04). "Identification of LZTFL1 as a candidate effector gene at a COVID-19 risk locus". Nature Genetics. 53 (11): 1606–1615. doi:10.1038/s41588-021-00955-3. PMC   7611960 . PMID   34737427.
  13. Zeberg, Hugo; Pääbo, Svante (30 September 2020). "The major genetic risk factor for severe COVID-19 is inherited from Neanderthals". Nature. 587 (7835): 610–612. Bibcode:2020Natur.587..610Z. doi: 10.1038/s41586-020-2818-3 . hdl: 21.11116/0000-0007-0F26-F . PMID   32998156. S2CID   222148977.