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Acidobacteriota is a phylum of Gram-negative bacteria. Its members are physiologically diverse and ubiquitous, especially in soils, but are under-represented in culture.
In molecular biology, a hybridization probe(HP) is a fragment of DNA or RNA of usually 15–10000 nucleotide long which can be radioactively or fluorescently labeled. HP can be used to detect the presence of nucleotide sequences in analyzed RNA or DNA that are complementary to the sequence in the probe. The labeled probe is first denatured into single stranded DNA (ssDNA) and then hybridized to the target ssDNA or RNA immobilized on a membrane or in situ.
Azotobacter is a genus of usually motile, oval or spherical bacteria that form thick-walled cysts and may produce large quantities of capsular slime. They are aerobic, free-living soil microbes that play an important role in the nitrogen cycle in nature, binding atmospheric nitrogen, which is inaccessible to plants, and releasing it in the form of ammonium ions into the soil. In addition to being a model organism for studying diazotrophs, it is used by humans for the production of biofertilizers, food additives, and some biopolymers. The first representative of the genus, Azotobacter chroococcum, was discovered and described in 1901 by Dutch microbiologist and botanist Martinus Beijerinck. Azotobacter species are Gram-negative bacteria found in neutral and alkaline soils, in water, and in association with some plants.
Filamentation, also termed conditional filamentation, is the anomalous growth of certain bacteria, such as Escherichia coli, in which cells continue to elongate but do not divide. The cells that result from elongation without division have multiple chromosomal copies. In the absence of antibiotics or other stressors, filamentation occurs at a low frequency in bacterial populations. The increased cell length can protect bacteria from protozoan predation and neutrophil phagocytosis by making ingestion of cells more difficult. Filamentation is also thought to protect bacteria from antibiotics, and is associated with other aspects of bacterial virulence such as biofilm formation. The number and length of filaments within a bacterial population increases when the bacteria are treated with various chemical and physical agents. Some of the key genes involved in filamentation in E. coli include sulA and minCD.
Campylobacterota are a phylum of bacteria. All species of this phylum are Gram-negative.
Mycobacterium gordonae is a species of Mycobacterium named for Ruth E. Gordon. It is a species of the phylum Actinomycetota, belonging to the genus Mycobacterium.
Mycobacteroides immunogenum is a species of bacteria from the phylum Actinomycetota, belonging to the genus Mycobacteroides.
Bacterial phyla constitute the major lineages of the domain Bacteria. While the exact definition of a bacterial phylum is debated, a popular definition is that a bacterial phylum is a monophyletic lineage of bacteria whose 16S rRNA genes share a pairwise sequence identity of ~75% or less with those of the members of other bacterial phyla.
Saccharibacteria, formerly known as TM7, is a major bacterial lineage. It was discovered through 16S rRNA sequencing.
Latilactobacillus sakei is the type species of the genus Latilactobacillus that was previously classified in the genus Lactobacillus. It is homofermentative; hexoses are metabolized via Glycolysis to lactic acid as main metabolite; pentoses are fermented via the Phosphoketolase pathway to lactic and acetic acids.
Bacillus atrophaeus is a species of black-pigmented bacteria. Its type strain is NRRL NRS-213. B. atrophaeus strains have been used extensively in biomedicine as indicator strains for heat- and chemical-based decontamination regimens. Most of the strains in use are derivatives of a lineage of B. atrophaeus that originated at Camp Detrick in the 1950s, where many modern biocontainment procedures were developed. B. atrophaeus has historically been known by several other names, including B. globigii and B. subtilis var. niger. Modern phylogenetic analyses using multiple genetic methods have placed B. atrophaeus close to B. subtilis. Its original and still most prominent use is as a surrogate organism for pathogenic B. anthracis, beginning in the U.S. bio-weapons program, as its pigmentation readily facilitated discrimination from non-pigmented background organisms in environmental samples. Subsequent genomic and phenotypic analysis of strains derived from the Camp Detrick isolates revealed that they had been deliberately selected for strains that exhibited elevated rates of sporulation.
Syntrophomonas wolfei is a bacterium. It is anaerobic, syntrophic and fatty acid-oxidizing. It has a multilayered cell wall of the gram-negative type.
Leptospirillum ferriphilum is an iron-oxidising bacterium. It is one of the species responsible for the generation of acid mine drainage. It is of particular relevance in South African commercial biooxidation tanks operating at 40 °C.
Bradyrhizobium canariense is a species of legume-root nodulating, endosymbiont nitrogen-fixing bacterium. It is acid-tolerant and nodulates endemic genistoid legumes from the Canary Islands. The type strain is BTA-1T.
Bradyrhizobium yuanmingense is a species of legume-root nodulating, endosymbiont nitrogen-fixing bacterium, associated with Lespedeza and Vigna species. Its type strain is CCBAU 10071(T).
Bradyrhizobium iriomotense is a species of legume-root nodulating, endosymbiont nitrogen-fixing bacterium, first isolated from Entada koshunensis. The type strain is EK05T.
Pelobacter carbinolicus is a species of bacteria that ferments 2,3-butanediol and acetoin. It is Gram-negative, strictly anaerobic and non-spore-forming. Gra Bd 1 is the type strain. Its genome has been sequenced.
Leuconostoc carnosum is a lactic acid bacterium; its type strain is NCFB 2776. Its genome has been sequenced. Its name derives from the fact that it was first isolated from chill-stored meats. Its significance is that it thrives in anaerobic environments with a temperature around 2 °C, thus has been known to spoil vacuum-packed meat, yet it is not pathogenic and certain strains of L. carnosum are known to produce bactericides known to inhibit or kill Listeria monocytogenes.
Nevskia is a Gram negative, strictly aerobic and motile genus of bacteria from the family Xanthomonadaceae.
Lone Gram is Danish microbiologist known for her work in bacterial physiology, microbial communication, and biochemicals that originate from bacterial cultures. She is an elected member of the Royal Danish Academy of Sciences and Letters and has received the Order of the Dannebrog.
References
- ↑ "German Collection of Microorganisms and Cell Cultures GmbH: Details". www.dsmz.de. Archived from the original on 17 December 2021. Retrieved 28 June 2022.
- 1 2 "UniProt". www.uniprot.org. Archived from the original on 20 April 2018. Retrieved 28 June 2022.
- 1 2 Stürmeyer, Heike; Overmann, Jörg; Babenzien, Hans-Dietrich; Cypionka, Heribert (May 1998). "Ecophysiological and Phylogenetic Studies of Nevskia ramosa in Pure Culture". Applied and Environmental Microbiology. 64 (5): 1890–1894. doi:10.1128/aem.64.5.1890-1894.1998.
- ↑ Glöckner, Frank Oliver; Babenzien, Hans-Dietrich; Amann, Rudolf (May 1998). "Phylogeny and Identification In Situ of Nevskia ramosa". Applied and Environmental Microbiology. 64 (5): 1895–1901. doi:10.1128/aem.64.5.1895-1901.1998.
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