PDE8A

PDE8A
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 3ECM, 3ECN
Identifiers
Aliases	PDE8A , HsT19550, phosphodiesterase 8A
External IDs	OMIM: 602972; MGI: 1277116; HomoloGene: 1957; GeneCards: PDE8A; OMA:PDE8A - orthologs
EC number	3.1.4.53
Gene location (Human) Chr. Chromosome 15 (human) [1] Band 15q25.3 Start 84,980,440 bp [1] End 85,139,145 bp [1]
Gene location (Mouse) Chr. Chromosome 7 (mouse) [2] Band 7|7 D3 Start 80,863,344 bp [2] End 80,984,281 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in corpus callosum middle frontal gyrus inferior ganglion of vagus nerve inferior olivary nucleus external globus pallidus subthalamic nucleus mucosa of colon pars reticulata mucosa of sigmoid colon palpebral conjunctiva Top expressed in seminiferous tubule cumulus cell spermatocyte lumbar subsegment of spinal cord lacrimal gland spermatid parotid gland calvaria pyloric antrum epithelium of stomach More reference expression data BioGPS More reference expression data
Gene ontology Molecular function phosphoric diester hydrolase activity hydrolase activity 3',5'-cyclic-nucleotide phosphodiesterase activity metal ion binding 3',5'-cyclic-AMP phosphodiesterase activity kinase binding 3',5'-cyclic-GMP phosphodiesterase activity Cellular component cytosol extracellular exosome Biological process cyclic nucleotide metabolic process cAMP catabolic process regulation of transcription, DNA-templated signal transduction positive regulation of protein phosphorylation negative regulation of cell death positive regulation of ERK1 and ERK2 cascade cellular response to epidermal growth factor stimulus negative regulation of hydrogen peroxide-induced cell death G protein-coupled receptor signaling pathway Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 5151 18584 Ensembl ENSG00000073417 ENSMUSG00000025584 UniProt O60658 O88502 RefSeq (mRNA) NM_001243137 NM_002605 NM_173454 NM_173455 NM_173456 NM_173457 NM_008803 RefSeq (protein) NP_001230066 NP_002596 NP_775656 NP_032829 Location (UCSC) Chr 15: 84.98 – 85.14 Mb Chr 7: 80.86 – 80.98 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A is an enzyme that in humans is encoded by the PDE8A gene. ^{[5] [6]} Work by Sebastiaan Bol et al. showed that 5 different transcript variants and their corresponding isoforms are expressed in human macrophages, and suggests that this protein may be required by HIV-1 for its replication. ^[7]

References

1. GRCh38: Ensembl release 89: ENSG00000073417 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000025584 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Fisher DA, Smith JF, Pillar JS, St Denis SH, Cheng JB (Jul 1998). "Isolation and characterization of PDE8A, a novel human cAMP-specific phosphodiesterase". Biochem Biophys Res Commun. 246 (3): 570–577. Bibcode:1998BBRC..246..570F. doi:10.1006/bbrc.1998.8684. PMID   9618252.
6. "Entrez Gene: PDE8A phosphodiesterase 8A".
7. Bol SM, Booiman T, Bunnik EM, Moerland PD, van Dort K, Strauss JF III, Sieberer M, Schuitemaker H, Kootstra NA, van 't Wout AB (Sep 2011). "Polymorphism in HIV-1 dependency factor PDE8A affects mRNA level and HIV-1 replication in primary macrophages". Virology. 420 (1): 32–42. doi: 10.1016/j.virol.2011.08.013 . PMID   21920574.

Further reading

• Bass BL (2002). "RNA editing by adenosine deaminases that act on RNA". Annu. Rev. Biochem. 71: 817–846. doi:10.1146/annurev.biochem.71.110601.135501. PMC   1823043 . PMID   12045112.
• Zauli G, Milani D, Mirandola P, et al. (2001). "HIV-1 Tat protein down-regulates CREB transcription factor expression in PC12 neuronal cells through a phosphatidylinositol 3-kinase/AKT/cyclic nucleoside phosphodiesterase pathway". FASEB J. 15 (2): 483–491. doi: 10.1096/fj.00-0354com . PMID   11156964. S2CID   26315564.
• Glavas NA, Ostenson C, Schaefer JB, et al. (2001). "T cell activation up-regulates cyclic nucleotide phosphodiesterases 8A1 and 7A3". Proc. Natl. Acad. Sci. U.S.A. 98 (11): 6319–6324. Bibcode:2001PNAS...98.6319G. doi: 10.1073/pnas.101131098 . PMC   33466 . PMID   11371644.
• Wang P, Wu P, Egan RW, Billah MM (2002). "Human phosphodiesterase 8A splice variants: cloning, gene organization, and tissue distribution". Gene. 280 (1–2): 183–194. doi:10.1016/S0378-1119(01)00783-1. PMID   11738832.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–16903. Bibcode:2002PNAS...9916899M. doi: 10.1073/pnas.242603899 . PMC   139241 . PMID   12477932.
• Gamanuma M, Yuasa K, Sasaki T, et al. (2003). "Comparison of enzymatic characterization and gene organization of cyclic nucleotide phosphodiesterase 8 family in humans". Cell. Signal. 15 (6): 565–574. doi:10.1016/S0898-6568(02)00146-8. PMID   12681444.
• Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–45. doi: 10.1038/ng1285 . PMID   14702039.
• Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–2127. doi:10.1101/gr.2596504. PMC   528928 . PMID   15489334.
• Wu P, Wang P (2005). "Per-Arnt-Sim domain-dependent association of cAMP-phosphodiesterase 8A1 with IkappaB proteins". Proc. Natl. Acad. Sci. U.S.A. 101 (51): 17634–17639. doi: 10.1073/pnas.0407649101 . PMC   539753 . PMID   15596729.