PDZD4

PDZD4
Identifiers
Aliases	PDZD4 , LU1, PDZK4, PDZRN4L, PDZ domain containing 4, LNX5
External IDs	OMIM: 300634; MGI: 2443483; HomoloGene: 13046; GeneCards: PDZD4; OMA:PDZD4 - orthologs
Gene location (Human) Chr. X chromosome (human) [1] Band Xq28 Start 153,802,166 bp [1] End 153,830,565 bp [1]
Gene location (Mouse) Chr. X chromosome (mouse) [2] Band X|X A7.3 Start 72,836,965 bp [2] End 72,868,575 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in right hemisphere of cerebellum right frontal lobe cingulate gyrus anterior cingulate cortex Brodmann area 9 prefrontal cortex amygdala nucleus accumbens caudate nucleus putamen Top expressed in dentate gyrus of hippocampal formation granule cell superior frontal gyrus supraoptic nucleus primary visual cortex epiblast ascending aorta otic vesicle ganglionic eminence hippocampus proper cerebellar cortex More reference expression data BioGPS More reference expression data
Gene ontology Molecular function ubiquitin protein ligase activity protein binding Cellular component cytoplasm cell cortex Biological process protein ubiquitination Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 57595 245469 Ensembl ENSG00000067840 ENSMUSG00000002006 UniProt Q76G19 Q17RL8 Q9QY39 RefSeq (mRNA) NM_032512 NM_001303512 NM_001303513 NM_001303514 NM_001303515 NM_001303516 NM_001029868 NM_001290540 RefSeq (protein) NP_001290441 NP_001290442 NP_001290443 NP_001290444 NP_001290445 NP_115901 NP_001290441.1 NP_001025039 NP_001277469 Location (UCSC) Chr X: 153.8 – 153.83 Mb Chr X: 72.84 – 72.87 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

PDZ domain-containing protein 4 is a protein that in humans is encoded by the PDZD4 gene. ^{[5] [6] [7]}

References

1. GRCh38: Ensembl release 89: ENSG00000067840 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000002006 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Nagase T, Kikuno R, Ishikawa K, Hirosawa M, Ohara O (Sep 2000). "Prediction of the coding sequences of unidentified human genes. XVII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro". DNA Res. 7 (2): 143–50. doi: 10.1093/dnares/7.2.143 . PMID   10819331.
6. Nagayama S, Iiizumi M, Katagiri T, Toguchida J, Nakamura Y (Jul 2004). "Identification of PDZK4, a novel human gene with PDZ domains, that is upregulated in synovial sarcomas". Oncogene. 23 (32): 5551–7. doi: 10.1038/sj.onc.1207710 . PMID   15077175.
7. "Entrez Gene: PDZD4 PDZ domain containing 4".

Further reading

• Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC   528928 . PMID   15489334.
• Katoh M, Katoh M (2004). "Identification and characterization of human PDZRN4L gene and mouse Pdzrn4l gene in silico". Int. J. Mol. Med. 13 (6): 923–7. doi:10.3892/ijmm.13.6.923. PMID   15138636.
• Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi: 10.1038/ng1285 . PMID   14702039.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi: 10.1073/pnas.242603899 . PMC   139241 . PMID   12477932.
• Brenner V, Nyakatura G, Rosenthal A, Platzer M (1997). "Genomic organization of two novel genes on human Xq28: compact head to head arrangement of IDH gamma and TRAP delta is conserved in rat and mouse". Genomics. 44 (1): 8–14. doi:10.1006/geno.1997.4822. PMID   9286695.
• Sandoval N, Bauer D, Brenner V, et al. (1996). "The genomic organization of a human creatine transporter (CRTR) gene located in Xq28". Genomics. 35 (2): 383–5. doi:10.1006/geno.1996.0373. PMID   8661155.