RAVER1

RAVER1
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 3H2U, 3H2V, 3SMZ, 3VF0
Identifiers
Aliases	RAVER1 , ribonucleoprotein, PTB binding 1
External IDs	OMIM: 609950; MGI: 1919016; HomoloGene: 12410; GeneCards: RAVER1; OMA:RAVER1 - orthologs
Gene location (Human) Chr. Chromosome 19 (human) [1] Band 19p13.2 Start 10,316,212 bp [1] End 10,333,638 bp [1]
Gene location (Mouse) Chr. Chromosome 9 (mouse) [2] Band 9|9 A3 Start 20,985,454 bp [2] End 21,003,304 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in granulocyte mucosa of transverse colon blood ventricular zone left uterine tube stromal cell of endometrium bone marrow cells right uterine tube right ovary body of uterus Top expressed in zygote secondary oocyte primary oocyte tail of embryo epiblast genital tubercle ventricular zone thymus adrenal gland yolk sac More reference expression data BioGPS n/a
Gene ontology Molecular function nucleic acid binding RNA binding protein binding Cellular component nucleus cytoplasm Biological process mRNA splicing, via spliceosome Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 125950 71766 Ensembl ENSG00000161847 ENSMUSG00000010205 UniProt Q8IY67 Q9CW46 RefSeq (mRNA) NM_133452 NM_001366174 NM_027911 RefSeq (protein) NP_597709 NP_001353103 NP_082187 Location (UCSC) Chr 19: 10.32 – 10.33 Mb Chr 9: 20.99 – 21 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Ribonucleoprotein, PTB-binding 1 (also known as RAVER1), is a human gene. ^[5]

References

1. GRCh38: Ensembl release 89: ENSG00000161847 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000010205 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. "Entrez Gene: RAVER1 ribonucleoprotein, PTB-binding 1".

Further reading

• Romanelli MG, Lorenzi P, Avesani F, Morandi C (December 2007). "Functional characterization of the ribonucleoprotein, PTB-binding 1/Raver1 promoter region". Gene. 405 (1–2): 79–87. doi:10.1016/j.gene.2007.09.004. PMID   17931803.
• Olsen JV, Blagoev B, Gnad F, Macek B, Kumar C, Mortensen P, Mann M (November 2006). "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks". Cell. 127 (3): 635–48. doi: 10.1016/j.cell.2006.09.026 . PMID   17081983. S2CID   7827573.
• Beausoleil SA, Villén J, Gerber SA, Rush J, Gygi SP (October 2006). "A probability-based approach for high-throughput protein phosphorylation analysis and site localization". Nature Biotechnology. 24 (10): 1285–92. doi:10.1038/nbt1240. PMID   16964243. S2CID   14294292.
• Beausoleil SA, Jedrychowski M, Schwartz D, Elias JE, Villén J, Li J, Cohn MA, Cantley LC, Gygi SP (August 2004). "Large-scale characterization of HeLa cell nuclear phosphoproteins". Proceedings of the National Academy of Sciences of the United States of America. 101 (33): 12130–5. Bibcode:2004PNAS..10112130B. doi: 10.1073/pnas.0404720101 . PMC   514446 . PMID   15302935.
• Nagase T, Kikuno R, Ohara O (December 2001). "Prediction of the coding sequences of unidentified human genes. XXII. The complete sequences of 50 new cDNA clones which code for large proteins". DNA Research. 8 (6): 319–27. doi: 10.1093/dnares/8.6.319 . PMID   11853319.
• Hüttelmaier S, Illenberger S, Grosheva I, Rüdiger M, Singer RH, Jockusch BM (November 2001). "Raver1, a dual compartment protein, is a ligand for PTB/hnRNPI and microfilament attachment proteins". The Journal of Cell Biology. 155 (5): 775–86. doi:10.1083/jcb.200105044. PMC   2150882 . PMID   11724819.