RBM22

RBM22
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 2YTC
Identifiers
Aliases	RBM22 , Cwc2, ZC3H16, fSAP47, RNA binding motif protein 22
External IDs	OMIM: 612430 MGI: 1914060 HomoloGene: 69245 GeneCards: RBM22
Gene location (Human) Chr. Chromosome 5 (human) [1] Band 5q33.1 Start 150,690,792 bp [1] End 150,701,077 bp [1]
Gene location (Mouse) Chr. Chromosome 18 (mouse) [2] Band 18|18 D3 Start 60,560,736 bp [2] End 60,572,810 bp [2]
RNA expression pattern More reference expression data
Gene ontology Molecular function • metal ion binding • calcium-dependent protein binding • nucleic acid binding • pre-mRNA binding • U6 snRNA binding • GO:0005487 structural constituent of nuclear pore • RNA binding • GO:0001948 protein binding Cellular component • cytoplasm • catalytic step 2 spliceosome • U2-type catalytic step 1 spliceosome • U2-type catalytic step 2 spliceosome • Prp19 complex • spliceosomal complex • nucleus • nucleoplasm Biological process • positive regulation of intracellular protein transport • mRNA processing • spliceosomal snRNP assembly • cellular response to drug • RNA splicing • mRNA cis splicing, via spliceosome • positive regulation of RNA splicing • mRNA splicing, via spliceosome • transport • positive regulation of protein import into nucleus • positive regulation of protein export from nucleus Sources:Amigo / QuickGO
Orthologs
Species	Human	Mouse
Entrez	55696	66810
Ensembl	ENSG00000086589	ENSMUSG00000024604
UniProt	Q9NW64	Q8BHS3
RefSeq (mRNA)	NM_018047	NM_025776
RefSeq (protein)	NP_060517	NP_080052
Location (UCSC)	Chr 5: 150.69 – 150.7 Mb	Chr 18: 60.56 – 60.57 Mb
PubMed search	[3]	[4]
Wikidata
View/Edit Human View/Edit Mouse

Pre-mRNA-splicing factor RBM22 is a protein that in humans is encoded by the RBM22 gene. ^{[5] [6]}

References

1. GRCh38: Ensembl release 89: ENSG00000086589 - Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000024604 - Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD, Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T, Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL, Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P, Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH, Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW, Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW, Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U, Smailus DE, Schnerch A, Schein JE, Jones SJ, Marra MA (Dec 2002). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc Natl Acad Sci U S A. 99 (26): 16899–903. doi: 10.1073/pnas.242603899 . PMC   139241 . PMID   12477932.
6. "Entrez Gene: RBM22 RNA binding motif protein 22".

Further reading

• Loftus SK, Dixon J, Koprivnikar K, et al. (1996). "Transcriptional map of the Treacher Collins candidate gene region". Genome Res. 6 (1): 26–34. doi: 10.1101/gr.6.1.26 . PMID   8681136.
• Hartley JL, Temple GF, Brasch MA (2001). "DNA Cloning Using In Vitro Site-Specific Recombination". Genome Res. 10 (11): 1788–95. doi:10.1101/gr.143000. PMC   310948 . PMID   11076863.
• Wiemann S, Weil B, Wellenreuther R, et al. (2001). "Toward a Catalog of Human Genes and Proteins: Sequencing and Analysis of 500 Novel Complete Protein Coding Human cDNAs". Genome Res. 11 (3): 422–35. doi:10.1101/gr.GR1547R. PMC   311072 . PMID   11230166.
• Simpson JC, Wellenreuther R, Poustka A, et al. (2001). "Systematic subcellular localization of novel proteins identified by large-scale cDNA sequencing". EMBO Rep. 1 (3): 287–92. doi:10.1093/embo-reports/kvd058. PMC   1083732 . PMID   11256614.
• Jurica MS, Licklider LJ, Gygi SR, et al. (2002). "Purification and characterization of native spliceosomes suitable for three-dimensional structural analysis". RNA. 8 (4): 426–39. doi:10.1017/S1355838202021088. PMC   1370266 . PMID   11991638.
• Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi: 10.1038/ng1285 . PMID   14702039.
• Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC   528928 . PMID   15489334.
• Wiemann S, Arlt D, Huber W, et al. (2004). "From ORFeome to Biology: A Functional Genomics Pipeline". Genome Res. 14 (10B): 2136–44. doi:10.1101/gr.2576704. PMC   528930 . PMID   15489336.
• Mehrle A, Rosenfelder H, Schupp I, et al. (2006). "The LIFEdb database in 2006". Nucleic Acids Res. 34 (Database issue): D415–8. doi:10.1093/nar/gkj139. PMC   1347501 . PMID   16381901.
• Montaville P, Dai Y, Cheung CY, et al. (2007). "Nuclear translocation of the calcium-binding protein ALG-2 induced by the RNA-binding protein RBM22". Biochim. Biophys. Acta. 1763 (11): 1335–43. doi:10.1016/j.bbamcr.2006.09.003. hdl: 11858/00-001M-0000-0012-E387-0 . PMID   17045351.