RIF1

Last updated
RIF1
Identifiers
Aliases RIF1 , replication timing regulatory factor 1
External IDs MGI: 1098622 HomoloGene: 41231 GeneCards: RIF1
Gene location (Human)
Ideogram human chromosome 2.svg
Chr. Chromosome 2 (human) [1]
Human chromosome 2 ideogram.svg
HSR 1996 II 3.5e.svg
Red rectangle 2x18.png
Band 2q23.3Start151,409,883 bp [1]
End151,508,013 bp [1]
RNA expression pattern
PBB GE RIF1 214700 x at fs.png
More reference expression data
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_001177663
NM_001177664
NM_001177665
NM_018151

NM_175238
NM_001355414
NM_001355415

RefSeq (protein)

NP_001171134
NP_001171135
NP_001171136
NP_060621

NP_780447
NP_001342343
NP_001342344

Location (UCSC) Chr 2: 151.41 – 151.51 Mb Chr 2: 52.07 – 52.12 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Telomere-associated protein RIF1 is a protein that in humans is encoded by the RIF1 gene. [5] [6] [7]

Protein biological molecule consisting of chains of amino acid residues

Proteins are large biomolecules, or macromolecules, consisting of one or more long chains of amino acid residues. Proteins perform a vast array of functions within organisms, including catalysing metabolic reactions, DNA replication, responding to stimuli, providing structure to cells and organisms, and transporting molecules from one location to another. Proteins differ from one another primarily in their sequence of amino acids, which is dictated by the nucleotide sequence of their genes, and which usually results in protein folding into a specific three-dimensional structure that determines its activity.

Gene Basic physical and functional unit of heredity

In biology, a gene is a sequence of nucleotides in DNA or RNA that codes for a molecule that has a function. During gene expression, the DNA is first copied into RNA. The RNA can be directly functional or be the intermediate template for a protein that performs a function. The transmission of genes to an organism's offspring is the basis of the inheritance of phenotypic trait. These genes make up different DNA sequences called genotypes. Genotypes along with environmental and developmental factors determine what the phenotypes will be. Most biological traits are under the influence of polygenes as well as gene–environment interactions. Some genetic traits are instantly visible, such as eye color or number of limbs, and some are not, such as blood type, risk for specific diseases, or the thousands of basic biochemical processes that constitute life.

RIF1 and RIF2 cap the chromosome ends (telomeres) in yeast. [8] In higher eukaryotes, Rif1 is involved in DNA damage response, organisation of chromatin architecture and the regulation of replication timing. RIF1 has been shown to bind to RNA in the nucleus. [9]

Related Research Articles

SFRS5 protein-coding gene in the species Homo sapiens

Splicing factor, arginine/serine-rich 5 is a protein that in humans is encoded by the SFRS5 gene.

MARCKSL1 protein-coding gene in the species Homo sapiens

MARCKS-related protein is a protein that in humans is encoded by the MARCKSL1 gene.

GTF3C2 protein-coding gene in the species Homo sapiens

General transcription factor 3C polypeptide 2 is a protein that in humans is encoded by the GTF3C2 gene.

PHF10 protein-coding gene in the species Homo sapiens

PHD finger protein 10 is a protein that in humans is encoded by the PHF10 gene.

TERF2IP protein-coding gene in the species Homo sapiens

Telomeric repeat-binding factor 2-interacting protein 1 is a protein that in humans is encoded by the TERF2IP gene.

ATXN2L protein-coding gene in the species Homo sapiens

Ataxin-2-like protein is a protein that in humans is encoded by the ATXN2L gene.

Nucleoporin 133 protein-coding gene in the species Homo sapiens

Nucleoporin 133 (Nup133) is a protein that in humans is encoded by the NUP133 gene.

FAM120A protein-coding gene in the species Homo sapiens

Constitutive coactivator of PPAR-gamma-like protein 1 is a protein that in humans is encoded by the FAM120A gene.

G3BP2 protein-coding gene in the species Homo sapiens

Ras GTPase-activating protein-binding protein 2 is an enzyme that in humans is encoded by the G3BP2 gene.

EML4 protein-coding gene in the species Homo sapiens

Echinoderm microtubule-associated protein-like 4 is a protein that in humans is encoded by the EML4 gene.

TNKS1BP1 protein-coding gene in the species Homo sapiens

182 kDa tankyrase-1-binding protein is an enzyme that in humans is encoded by the TNKS1BP1 gene.

KCTD12 protein-coding gene in the species Homo sapiens

BTB/POZ domain-containing protein KCTD12 is a protein that in humans is encoded by the KCTD12 gene.

UTP18 protein-coding gene in the species Homo sapiens

U3 small nucleolar RNA-associated protein 18 homolog is a protein that in humans is encoded by the UTP18 gene.

CACTIN protein-coding gene in the species Homo sapiens

Cactin also known as renal carcinoma antigen NY-REN-24 is a protein that in humans is encoded by the CACTIN gene.

OSBPL11 protein-coding gene in the species Homo sapiens

Oxysterol-binding protein-related protein 11 is a protein that in humans is encoded by the OSBPL11 gene.

TMCO1 protein-coding gene in the species Homo sapiens

Transmembrane and coiled-coil domain-containing protein 1 is a protein that in humans is encoded by the TMCO1 gene.

Gem-associated protein 5 protein-coding gene in the species Homo sapiens

Gem-associated protein 5 is a protein that in humans is encoded by the GEMIN5 gene.

CHAMP1 protein-coding gene in the species Homo sapiens

Chromosome alignment-maintaining phosphoprotein 1 (CHAMP1) also known as zinc finger protein 828 (ZNF828) is a protein that in humans is encoded by the CHAMP1 gene.

Caspase activity and apoptosis inhibitor 1 protein-coding gene in the species Homo sapiens

Caspase activity and apoptosis inhibitor 1 is a protein that in humans is encoded by the CAAP1 gene.

RAVER1 protein-coding gene in the species Homo sapiens

Ribonucleoprotein, PTB-binding 1, is a human gene.

References

  1. 1 2 3 GRCh38: Ensembl release 89: ENSG00000080345 - Ensembl, May 2017
  2. 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000036202 - Ensembl, May 2017
  3. "Human PubMed Reference:".
  4. "Mouse PubMed Reference:".
  5. Silverman J, Takai H, Buonomo SB, Eisenhaber F, de Lange T (September 2004). "Human Rif1, ortholog of a yeast telomeric protein, is regulated by ATM and 53BP1 and functions in the S-phase checkpoint". Genes & Development. 18 (17): 2108–19. doi:10.1101/gad.1216004. PMC   515289 Lock-green.svg. PMID   15342490.
  6. Adams IR, McLaren A (April 2004). "Identification and characterisation of mRif1: a mouse telomere-associated protein highly expressed in germ cells and embryo-derived pluripotent stem cells". Developmental Dynamics. 229 (4): 733–44. doi:10.1002/dvdy.10471. PMID   15042697.
  7. "Entrez Gene: RIF1 RAP1 interacting factor homolog (yeast)".
  8. Ribeyre C, Shore D (2012). "Anticheckpoint pathways at telomeres in yeast". Nature Structural & Molecular Biology. 19 (3): 307–13. doi:10.1038/nsmb.2225. PMID   22343724.
  9. Conrad T, Albrecht AS, de Melo Costa VR, Sauer S, Meierhofer D, Ørom UA (2016-01-01). "Serial interactome capture of the human cell nucleus". Nature Communications. 7: 11212. doi:10.1038/ncomms11212. PMC   4822031 Lock-green.svg. PMID   27040163.

Further reading

Digital object identifier Character string used as a permanent identifier for a digital object, in a format controlled by the International DOI Foundation

In computing, a Digital Object Identifier or DOI is a persistent identifier or handle used to identify objects uniquely, standardized by the International Organization for Standardization (ISO). An implementation of the Handle System, DOIs are in wide use mainly to identify academic, professional, and government information, such as journal articles, research reports and data sets, and official publications though they also have been used to identify other types of information resources, such as commercial videos.

PubMed Central (PMC) is a free digital repository that archives publicly accessible full-text scholarly articles that have been published within the biomedical and life sciences journal literature. As one of the major research databases within the suite of resources that have been developed by the National Center for Biotechnology Information (NCBI), PubMed Central is much more than just a document repository. Submissions into PMC undergo an indexing and formatting procedure which results in enhanced metadata, medical ontology, and unique identifiers which all enrich the XML structured data for each article on deposit. Content within PMC can easily be interlinked to many other NCBI databases and accessed via Entrez search and retrieval systems, further enhancing the public's ability to freely discover, read and build upon this portfolio of biomedical knowledge.