SEC61B

Last updated
SEC61B
Available structures
PDB Ortholog search: PDBe RCSB
Identifiers
Aliases SEC61B , Sec61 translocon beta subunit, SEC61 translocon subunit beta
External IDs OMIM: 609214 MGI: 1913462 HomoloGene: 38229 GeneCards: SEC61B
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_006808

NM_024171

RefSeq (protein)

NP_006799

NP_077133

Location (UCSC) Chr 9: 99.22 – 99.23 Mb Chr 4: 47.47 – 47.48 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Protein transport protein Sec61 subunit beta is a protein that in humans is encoded by the SEC61B gene. [5] [6] [7]

The Sec61 complex is the central component of the protein translocation apparatus of the endoplasmic reticulum (ER) membrane. The Sec61 complex forms a transmembrane channel where proteins are translocated across and integrated into the ER membrane. This complex consists of three membrane proteins- alpha, beta, and gamma. This gene encodes the beta-subunit protein. The Sec61 subunits are also observed in the post-ER compartment, suggesting that these proteins can escape the ER and recycle back. There is evidence for multiple polyadenylated sites for this transcript. [7]

Related Research Articles

The translocon is a complex of proteins associated with the translocation of polypeptides across membranes. In eukaryotes the term translocon most commonly refers to the complex that transports nascent polypeptides with a targeting signal sequence into the interior space of the endoplasmic reticulum (ER) from the cytosol. This translocation process requires the protein to cross a hydrophobic lipid bilayer. The same complex is also used to integrate nascent proteins into the membrane itself. In prokaryotes, a similar protein complex transports polypeptides across the (inner) plasma membrane or integrates membrane proteins. In either case, the protein complex are formed from Sec proteins, with the heterotrimeric Sec61 being the channel. In prokaryotes, the homologous channel complex is known as SecYEG.

<span class="mw-page-title-main">Oligosaccharyltransferase</span>

Oligosaccharyltransferase or OST (EC 2.4.1.119) is a membrane protein complex that transfers a 14-sugar oligosaccharide from dolichol to nascent protein. It is a type of glycosyltransferase. The sugar Glc3Man9GlcNAc2 (where Glc=Glucose, Man=Mannose, and GlcNAc=N-acetylglucosamine) is attached to an asparagine (Asn) residue in the sequence Asn-X-Ser or Asn-X-Thr where X is any amino acid except proline. This sequence is called a glycosylation sequon. The reaction catalyzed by OST is the central step in the N-linked glycosylation pathway.

<span class="mw-page-title-main">Ribophorin</span>

Ribophorins are dome shaped transmembrane glycoproteins which are located in the membrane of the rough endoplasmic reticulum, but are absent in the membrane of the smooth endoplasmic reticulum. There are two types of ribophorines: ribophorin I and II. These act in the protein complex oligosaccharyltransferase (OST) as two different subunits of the named complex. Ribophorin I and II are only present in eukaryote cells.

<span class="mw-page-title-main">ATF6</span> Protein-coding gene in the species Homo sapiens

Activating transcription factor 6, also known as ATF6, is a protein that, in humans, is encoded by the ATF6 gene and is involved in the unfolded protein response.

<span class="mw-page-title-main">PRKCSH</span> Protein-coding gene in the species Homo sapiens

Glucosidase 2 subunit beta is an enzyme that in humans is encoded by the PRKCSH gene.

<span class="mw-page-title-main">ATP2A3</span> Protein-coding gene in the species Homo sapiens

Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 is an enzyme that in humans is encoded by the ATP2A3 gene.

<span class="mw-page-title-main">SELS (gene)</span> Protein-coding gene in the species Homo sapiens

Selenoprotein S, also known as SELS, is a human gene.

<span class="mw-page-title-main">RPN1</span> Protein-coding gene in the species Homo sapiens

Dolichyl-diphosphooligosaccharide—protein glycosyltransferase subunit 1 is an enzyme that in humans is encoded by the RPN1 gene.

<span class="mw-page-title-main">SEC13</span> Protein-coding gene in the species Homo sapiens

Protein SEC13 homolog is a protein that in humans is encoded by the SEC13 gene.

<span class="mw-page-title-main">SSR1</span> Protein-coding gene in the species Homo sapiens

Translocon-associated protein subunit alpha is a protein that in humans is encoded by the SSR1 gene.

<span class="mw-page-title-main">CREBL1</span> Protein-coding gene in the species Homo sapiens

CAMP responsive element binding protein-like 1, also known as CREBL1, is a protein which in humans is encoded by the CREBL1 gene.

<span class="mw-page-title-main">RRBP1</span> Protein-coding gene in the species Homo sapiens

Ribosome-binding protein 1, also referred to as p180, is a protein that in humans is encoded by the RRBP1 gene.

<span class="mw-page-title-main">Sec61 alpha 1</span>

Protein transport protein Sec61 subunit alpha isoform 1 is a protein that in humans is encoded by the SEC61A1 gene.

<span class="mw-page-title-main">SSR2</span> Protein-coding gene in the species Homo sapiens

Translocon-associated protein subunit beta also known as TRAP-beta is a protein that in humans is encoded by the SSR2 gene.

<span class="mw-page-title-main">SEC63</span> Protein-coding gene in the species Homo sapiens

Translocation protein SEC63 homolog is a protein that in humans is encoded by the SEC63 gene.

<span class="mw-page-title-main">SEC61G</span> Mammalian protein found in Homo sapiens

Protein transport protein Sec61 subunit gamma is a protein that in humans is encoded by the SEC61G gene.

<span class="mw-page-title-main">SRPRB</span> Protein-coding gene in the species Homo sapiens

Signal recognition particle receptor subunit beta is a protein that in humans is encoded by the SRPRB gene.

<span class="mw-page-title-main">COG1</span> Protein-coding gene in the species Homo sapiens

Conserved oligomeric Golgi complex subunit 1 is a protein that in humans is encoded by the COG1 gene.

<span class="mw-page-title-main">SEC62</span> Protein-coding gene in the species Homo sapiens

Translocation protein SEC62 is a protein that in humans is encoded by the SEC62 gene.

<span class="mw-page-title-main">DPM3</span> Protein-coding gene in the species Homo sapiens

dolichyl-phosphate mannosyltransferase polypeptide 3, also known as DPM3, is a human gene.

References

  1. 1 2 3 GRCh38: Ensembl release 89: ENSG00000106803 - Ensembl, May 2017
  2. 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000053317 - Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Hartmann E, Sommer T, Prehn S, Gorlich D, Jentsch S, Rapoport TA (Mar 1994). "Evolutionary conservation of components of the protein translocation complex". Nature. 367 (6464): 654–7. Bibcode:1994Natur.367..654H. doi:10.1038/367654a0. PMID   8107851. S2CID   4323463.
  6. Greenfield JJ, High S (Aug 1999). "The Sec61 complex is located in both the ER and the ER-Golgi intermediate compartment". J Cell Sci. 112 (10): 1477–86. doi:10.1242/jcs.112.10.1477. PMID   10212142.
  7. 1 2 "Entrez Gene: SEC61B Sec61 beta subunit".

Further reading