SLC35F6

SLC35F6
Identifiers
Aliases	SLC35F6 , ANT2BP, C2orf18, TANGO9, solute carrier family 35 member F6
External IDs	MGI: 1922169; HomoloGene: 9896; GeneCards: SLC35F6; OMA:SLC35F6 - orthologs
Gene location (Human) Chr. Chromosome 2 (human) [1] Band 2p23.3 Start 26,764,284 bp [1] End 26,781,231 bp [1]
Gene location (Mouse) Chr. Chromosome 5 (mouse) [2] Band 5|5 B1 Start 30,805,277 bp [2] End 30,817,073 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in nipple decidua mucosa of pharynx pericardium superior surface of tongue saphenous vein gingival epithelium body of tongue vena cava oral cavity Top expressed in interventricular septum yolk sac epithelium of small intestine lip epithelium of stomach granulocyte myocardium of ventricle stroma of bone marrow spermatocyte decidua More reference expression data BioGPS n/a
Gene ontology Molecular function protein binding transmembrane transporter activity Cellular component integral component of membrane lysosomal membrane lysosome extracellular exosome membrane mitochondrion nucleoplasm cytosol intracellular membrane-bounded organelle Biological process negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway positive regulation of cell population proliferation transport transmembrane transport Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 54978 74919 Ensembl ENSG00000213699 ENSMUSG00000029175 UniProt Q8N357 Q8VE96 RefSeq (mRNA) NM_017877 NM_175675 RefSeq (protein) NP_060347 NP_783606 Location (UCSC) Chr 2: 26.76 – 26.78 Mb Chr 5: 30.81 – 30.82 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

SLC35F6 is a protein that in humans is encoded by the SLC35F6 gene. ^{[5] [6]} The orthologue in mice is 4930471M23Rik. ^[6]

References

1. GRCh38: Ensembl release 89: ENSG00000213699 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000029175 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Clark HF, Gurney AL, Abaya E, Baker K, Baldwin D, Brush J, Chen J, Chow B, Chui C, Crowley C, Currell B, Deuel B, Dowd P, Eaton D, Foster J, Grimaldi C, Gu Q, Hass PE, Heldens S, Huang A, Kim HS, Klimowski L, Jin Y, Johnson S, Lee J, Lewis L, Liao D, Mark M, Robbie E, Sanchez C, Schoenfeld J, Seshagiri S, Simmons L, Singh J, Smith V, Stinson J, Vagts A, Vandlen R, Watanabe C, Wieand D, Woods K, Xie MH, Yansura D, Yi S, Yu G, Yuan J, Zhang M, Zhang Z, Goddard A, Wood WI, Godowski P, Gray A (Oct 2003). "The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment". Genome Res. 13 (10): 2265–70. doi:10.1101/gr.1293003. PMC   403697 . PMID   12975309.
6. "Entrez Gene: C2orf18 chromosome 2 open reading frame 18".

External links

• Human SLC35F6 genome location and SLC35F6 gene details page in the UCSC Genome Browser .

Further reading

• Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–4. doi:10.1016/0378-1119(94)90802-8. PMID   8125298.
• Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, et al. (1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–56. doi:10.1016/S0378-1119(97)00411-3. PMID   9373149.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi: 10.1073/pnas.242603899 . PMC   139241 . PMID   12477932.
• Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi: 10.1038/ng1285 . PMID   14702039.
• Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC   528928 . PMID   15489334.
• Hillier LW, Graves TA, Fulton RS, et al. (2005). "Generation and annotation of the DNA sequences of human chromosomes 2 and 4". Nature. 434 (7034): 724–31. Bibcode:2005Natur.434..724H. doi: 10.1038/nature03466 . PMID   15815621.
• Stelzl U, Worm U, Lalowski M, et al. (2005). "A human protein-protein interaction network: a resource for annotating the proteome". Cell. 122 (6): 957–68. doi:10.1016/j.cell.2005.08.029. hdl: 11858/00-001M-0000-0010-8592-0 . PMID   16169070. S2CID   8235923.
• Otsuki T, Ota T, Nishikawa T, et al. (2007). "Signal sequence and keyword trap in silico for selection of full-length human cDNAs encoding secretion or membrane proteins from oligo-capped cDNA libraries". DNA Res. 12 (2): 117–26. doi: 10.1093/dnares/12.2.117 . PMID   16303743.