SLU7

Last updated
SLU7
Identifiers
Aliases SLU7 , 9G8, hSlu7, SLU7 homolog, splicing factor
External IDs OMIM: 605974 MGI: 2385598 HomoloGene: 4690 GeneCards: SLU7
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_006425

NM_148673
NM_198936

RefSeq (protein)

NP_683514
NP_945174

Location (UCSC) Chr 5: 160.4 – 160.42 Mb Chr 11: 43.32 – 43.34 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Pre-mRNA-splicing factor SLU7 is a protein that in humans is encoded by the SLU7 gene. [5] [6] [7]

Pre-mRNA splicing occurs in two sequential transesterification steps. The protein encoded by this gene is a splicing factor that has been found to be essential during the second catalytic step in the pre-mRNA splicing process. It associates with the spliceosome and contains a zinc knuckle motif that is found in other splicing factors and is involved in protein-nucleic acid and protein-protein interactions. [7]

Related Research Articles

<span class="mw-page-title-main">Spliceosome</span> Molecular machine that removes intron RNA from the primary transcript

A spliceosome is a large ribonucleoprotein (RNP) complex found primarily within the nucleus of eukaryotic cells. The spliceosome is assembled from small nuclear RNAs (snRNA) and numerous proteins. Small nuclear RNA (snRNA) molecules bind to specific proteins to form a small nuclear ribonucleoprotein complex, which in turn combines with other snRNPs to form a large ribonucleoprotein complex called a spliceosome. The spliceosome removes introns from a transcribed pre-mRNA, a type of primary transcript. This process is generally referred to as splicing. An analogy is a film editor, who selectively cuts out irrelevant or incorrect material from the initial film and sends the cleaned-up version to the director for the final cut.

<span class="mw-page-title-main">U2AF2</span> Protein-coding gene in the species Homo sapiens

Splicing factor U2AF 65 kDa subunit is a protein that in humans is encoded by the U2AF2 gene.

snRNP70 Protein-coding gene in the species Homo sapiens

snRNP70 also known as U1 small nuclear ribonucleoprotein 70 kDa is a protein that in humans is encoded by the SNRNP70 gene. snRNP70 is a small nuclear ribonucleoprotein that associates with U1 spliceosomal RNA, forming the U1snRNP a core component of the spliceosome. The U1-70K protein and other components of the spliceosome complex form detergent-insoluble aggregates in both sporadic and familial human cases of Alzheimer's disease. U1-70K co-localizes with Tau in neurofibrillary tangles in Alzheimer's disease.

<span class="mw-page-title-main">PRPF8</span> Protein-coding gene in the species Homo sapiens

Pre-mRNA-processing-splicing factor 8 is a protein that in humans is encoded by the PRPF8 gene.

<span class="mw-page-title-main">SF3A1</span> Protein-coding gene in the species Homo sapiens

Splicing factor 3 subunit 1 is a protein that in humans is encoded by the SF3A1 gene.

<span class="mw-page-title-main">SF1 (gene)</span> Protein-coding gene in the species Homo sapiens

Splicing factor 1 also known as zinc finger protein 162 (ZFM162) is a protein that in humans is encoded by the SF1 gene.

<span class="mw-page-title-main">SF3B1</span> Protein-coding gene in humans

Splicing factor 3B subunit 1 is a protein that in humans is encoded by the SF3B1 gene.

<span class="mw-page-title-main">SF3A3</span> Protein-coding gene in the species Homo sapiens

Splicing factor 3A subunit 3 is a protein that in humans is encoded by the SF3A3 gene.

<span class="mw-page-title-main">SF3A2</span> Protein-coding gene in the species Homo sapiens

Splicing factor 3A subunit 2 is a protein that in humans is encoded by the SF3A2 gene.

<span class="mw-page-title-main">SF3B2</span> Protein-coding gene in the species Homo sapiens

Splicing factor 3B subunit 2 is a protein that in humans is encoded by the SF3B2 gene.

<span class="mw-page-title-main">SF3B4</span> Protein-coding gene in the species Homo sapiens

Splicing factor 3B subunit 4 is a protein that in humans is encoded by the SF3B4 gene.

<span class="mw-page-title-main">SF3B3</span> Protein-coding gene in the species Homo sapiens

Splicing factor 3B subunit 3 is a protein that in humans is encoded by the SF3B3 gene.

<span class="mw-page-title-main">PRPF6</span> Protein-coding gene in the species Homo sapiens

Pre-mRNA-processing factor 6 is a protein that in humans is encoded by the PRPF6 gene.

<span class="mw-page-title-main">PRPF19</span> Protein-coding gene in the species Homo sapiens

Pre-mRNA-processing factor 19 is a protein that in humans is encoded by the PRPF19 gene.

<span class="mw-page-title-main">PRPF4</span> Protein-coding gene in the species Homo sapiens

U4/U6 small nuclear ribonucleoprotein Prp4 is a protein that in humans is encoded by the PRPF4 gene. The removal of introns from nuclear pre-mRNAs occurs on complexes called spliceosomes, which are made up of 4 small nuclear ribonucleoprotein (snRNP) particles and an undefined number of transiently associated splicing factors. PRPF4 is 1 of several proteins that associate with U4 and U6 snRNPs.[supplied by OMIM]

<span class="mw-page-title-main">CDC40</span> Protein-coding gene in the species Homo sapiens

Pre-mRNA-processing factor 17 is a protein that in humans is encoded by the CDC40 gene.

<span class="mw-page-title-main">DHX38</span> Protein-coding gene in the species Homo sapiens

Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 is an enzyme that in humans is encoded by the DHX38 gene.

<span class="mw-page-title-main">DDX23</span> Protein-coding gene in humans

Probable ATP-dependent RNA helicase DDX23 is an enzyme that in humans is encoded by the DDX23 gene.

<span class="mw-page-title-main">ZRSR2</span> Protein-coding gene in the species Homo sapiens

U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 is a protein that in humans is encoded by the ZRSR2 gene.

<span class="mw-page-title-main">Prp8</span>

Prp8 refers to both the Prp8 protein and Prp8 gene. Prp8's name originates from its involvement in pre-mRNA processing. The Prp8 protein is a large, highly conserved, and unique protein that resides in the catalytic core of the spliceosome and has been found to have a central role in molecular rearrangements that occur there. Prp8 protein is a major central component of the catalytic core in the spliceosome, and the spliceosome is responsible for splicing of precursor mRNA that contains introns and exons. Unexpressed introns are removed by the spliceosome complex in order to create a more concise mRNA transcript. Splicing is just one of many different post-transcriptional modifications that mRNA must undergo before translation. Prp8 has also been hypothesized to be a cofactor in RNA catalysis.

References

  1. 1 2 3 GRCh38: Ensembl release 89: ENSG00000164609 - Ensembl, May 2017
  2. 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000020409 - Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Chua K, Reed R (May 1999). "Human step II splicing factor hSlu7 functions in restructuring the spliceosome between the catalytic steps of splicing". Genes Dev. 13 (7): 841–50. doi:10.1101/gad.13.7.841. PMC   316594 . PMID   10197984.
  6. Shomron N, Alberstein M, Reznik M, Ast G (Mar 2005). "Stress alters the subcellular distribution of hSlu7 and thus modulates alternative splicing". J Cell Sci. 118 (Pt 6): 1151–9. doi:10.1242/jcs.01720. PMID   15728250. S2CID   18873022.
  7. 1 2 "Entrez Gene: SLU7 SLU7 splicing factor homolog (S. cerevisiae)".

Further reading