SMYD4

SMYD4
Identifiers
Aliases	SMYD4 , ZMYND21, SET and MYND domain containing 4
External IDs	MGI: 2442796; HomoloGene: 35098; GeneCards: SMYD4; OMA:SMYD4 - orthologs
Gene location (Human) Chr. Chromosome 17 (human) [1] Band 17p13.3 Start 1,779,485 bp [1] End 1,830,634 bp [1]
Gene location (Mouse) Chr. Chromosome 11 (mouse) [2] Band 11|11 B5 Start 75,239,259 bp [2] End 75,296,531 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in gastrocnemius muscle muscle of thigh deltoid muscle endothelial cell gonad popliteal artery tibial arteries Achilles tendon gastric mucosa left ovary Top expressed in extraocular muscle substantia nigra vestibular membrane of cochlear duct Epithelium of choroid plexus lumbar spinal ganglion right kidney endothelial cell of lymphatic vessel medullary collecting duct neural tube ventricular zone More reference expression data BioGPS n/a
Orthologs Species Human Mouse Entrez 114826 319822 Ensembl ENSG00000186532 ENSMUSG00000018809 UniProt Q8IYR2 Q8BTK5 RefSeq (mRNA) NM_052928 NM_001102611 NM_177009 RefSeq (protein) NP_443160 NP_001096081 Location (UCSC) Chr 17: 1.78 – 1.83 Mb Chr 11: 75.24 – 75.3 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

SET and MYND domain-containing protein 4 is a protein that in humans is encoded by the SMYD4 gene. ^{[5] [6]}

References

1. GRCh38: Ensembl release 89: ENSG00000186532 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000018809 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Nagase T; Kikuno R; Ohara O (Sep 2001). "Prediction of the coding sequences of unidentified human genes. XXI. The complete sequences of 60 new cDNA clones from brain which code for large proteins". DNA Res. 8 (4): 179–87. doi: 10.1093/dnares/8.4.179 . PMID   11572484.
6. "Entrez Gene: SMYD4 SET and MYND domain containing 4".

Further reading

• Kimura K, Wakamatsu A, Suzuki Y, et al. (2006). "Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes". Genome Res. 16 (1): 55–65. doi:10.1101/gr.4039406. PMC   1356129 . PMID   16344560.
• Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC   528928 . PMID   15489334.
• Brandenberger R, Wei H, Zhang S, et al. (2005). "Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation". Nat. Biotechnol. 22 (6): 707–16. doi:10.1038/nbt971. PMID   15146197. S2CID   27764390.
• Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi: 10.1038/ng1285 . PMID   14702039.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi: 10.1073/pnas.242603899 . PMC   139241 . PMID   12477932.
• Xu XR, Huang J, Xu ZG, et al. (2002). "Insight into hepatocellular carcinogenesis at transcriptome level by comparing gene expression profiles of hepatocellular carcinoma with those of corresponding noncancerous liver". Proc. Natl. Acad. Sci. U.S.A. 98 (26): 15089–94. Bibcode:2001PNAS...9815089X. doi: 10.1073/pnas.241522398 . PMC   64988 . PMID   11752456.
• Bonaldo MF; Lennon G; Soares MB (1997). "Normalization and subtraction: two approaches to facilitate gene discovery". Genome Res. 6 (9): 791–806. doi: 10.1101/gr.6.9.791 . PMID   8889548.