SPATC1L

SPATC1L
Identifiers
Aliases	SPATC1L , C21orf56, spermatogenesis and centriole associated 1-like, spermatogenesis and centriole associated 1 like
External IDs	OMIM: 612412; MGI: 1923823; HomoloGene: 75292; GeneCards: SPATC1L; OMA:SPATC1L - orthologs
Gene location (Human) Chr. Chromosome 21 (human) [1] Band 21q22.3 Start 46,161,148 bp [1] End 46,184,476 bp [1]
Gene location (Mouse) Chr. Chromosome 10 (mouse) [2] Band 10|10 C1 Start 76,398,106 bp [2] End 76,406,035 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in right testis left testis left adrenal cortex prostate right adrenal cortex putamen temporal lobe amygdala nucleus accumbens hippocampus proper Top expressed in seminiferous tubule spermatid parasympathetic nervous system thyroid gland pharynx tongue spermatocyte embryo submandibular gland right kidney More reference expression data BioGPS n/a
Gene ontology Molecular function protein binding molecular function Cellular component centrosome cellular component Biological process biological process Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 84221 76573 Ensembl ENSG00000160284 ENSG00000274679 ENSMUSG00000009115 UniProt Q9H0A9 Q9D9W0 RefSeq (mRNA) NM_001142854 NM_032261 NM_029661 NM_001359186 RefSeq (protein) NP_001136326 NP_115637 NP_083937 NP_001346115 Location (UCSC) Chr 21: 46.16 – 46.18 Mb Chr 10: 76.4 – 76.41 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

SPATC1L is a protein that in humans is encoded by the SPATC1L gene. ^[5]

References

1. ENSG00000274679 GRCh38: Ensembl release 89: ENSG00000160284, ENSG00000274679 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000009115 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. "Entrez Gene: C21orf56 chromosome 21 open reading frame 56".

External links

• Human SPATC1L genome location and SPATC1L gene details page in the UCSC Genome Browser .

Further reading

• Mehrle A, Rosenfelder H, Schupp I, et al. (2006). "The LIFEdb database in 2006". Nucleic Acids Res. 34 (Database issue): D415–8. doi:10.1093/nar/gkj139. PMC   1347501 . PMID   16381901.
• Wiemann S, Arlt D, Huber W, et al. (2004). "From ORFeome to biology: a functional genomics pipeline". Genome Res. 14 (10B): 2136–44. doi:10.1101/gr.2576704. PMC   528930 . PMID   15489336.
• Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC   528928 . PMID   15489334.
• Lehner B, Sanderson CM (2004). "A protein interaction framework for human mRNA degradation". Genome Res. 14 (7): 1315–23. doi:10.1101/gr.2122004. PMC   442147 . PMID   15231747.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi: 10.1073/pnas.242603899 . PMC   139241 . PMID   12477932.
• Wiemann S, Weil B, Wellenreuther R, et al. (2001). "Toward a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs". Genome Res. 11 (3): 422–35. doi:10.1101/gr.GR1547R. PMC   311072 . PMID   11230166.
• Hartley JL, Temple GF, Brasch MA (2001). "DNA cloning using in vitro site-specific recombination". Genome Res. 10 (11): 1788–95. doi:10.1101/gr.143000. PMC   310948 . PMID   11076863.
• Hattori M, Fujiyama A, Taylor TD, et al. (2000). "The DNA sequence of human chromosome 21". Nature. 405 (6784): 311–9. Bibcode:2000Natur.405..311H. doi: 10.1038/35012518 . PMID   10830953.