SUPT20H

SUPT20H
Identifiers
Aliases	SUPT20H , C13, C13orf19, FAM48A, P38IP, SPT20, FP757, SPT20 homolog, SAGA complex component
External IDs	OMIM: 613417 HomoloGene: 133929 GeneCards: SUPT20H
Gene location (Human) Chr. Chromosome 13 (human) [1] Band 13q13.3 Start 37,009,312 bp [1] End 37,059,713 bp [1]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in right uterine tube ganglionic eminence canal of the cervix anterior pituitary cerebellar hemisphere Achilles tendon left lobe of thyroid gland right lobe of thyroid gland body of pancreas rectum n/a More reference expression data BioGPS More reference expression data
Gene ontology Molecular function protein binding transcription coregulator activity Cellular component SAGA-type complex SAGA complex nucleus fibrillar center Biological process autophagy multicellular organism development gastrulation regulation of nucleic acid-templated transcription regulation of transcription by RNA polymerase II Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 55578 n/a Ensembl ENSG00000102710 n/a UniProt Q8NEM7 n/a RefSeq (mRNA) NM_001014286 NM_001278480 NM_001278481 NM_001278482 NM_017569 n/a RefSeq (protein) NP_001014308 NP_001265409 NP_001265410 NP_001265411 NP_060039 n/a Location (UCSC) Chr 13: 37.01 – 37.06 Mb n/a PubMed search [2] n/a
Wikidata
View/Edit Human

SPT20 homolog is a protein that in humans is encoded by the SUPT20H gene. ^{[3] [4] [5]}

References

1. GRCh38: Ensembl release 89: ENSG00000102710 - Ensembl, May 2017
2. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
3. Gomes I, Sharma TT, Edassery S, Fulton N, Mar BG, Westbrook CA (Jun 2002). "Novel transcription factors in human CD34 antigen-positive hematopoietic cells". Blood. 100 (1): 107–19. doi: 10.1182/blood.V100.1.107 . PMID   12070015.
4. Kunze D, Fuessel S, Meye A, Wirth MP, Schmidt U (May 2006). "Functional analyses of C13orf19/P38IP in prostate cell lines". Oncol Rep. 15 (6): 1599–604. doi: 10.3892/or.15.6.1599 . PMID   16685401.
5. "Entrez Gene: FAM48A family with sequence similarity 48, member A".

Further reading

• Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–4. doi:10.1016/0378-1119(94)90802-8. PMID   8125298.
• Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, et al. (1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–56. doi:10.1016/S0378-1119(97)00411-3. PMID   9373149.
• Schmidt U, Fiedler U, Pilarsky CP, et al. (2001). "Identification of a novel gene on chromosome 13 between BRCA-2 and RB-1". Prostate. 47 (2): 91–101. doi:10.1002/pros.1051. PMID   11340631. S2CID   20381507.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi: 10.1073/pnas.242603899 . PMC   139241 . PMID   12477932.
• Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi: 10.1038/ng1285 . PMID   14702039.
• Dunham A, Matthews LH, Burton J, et al. (2004). "The DNA sequence and analysis of human chromosome 13". Nature. 428 (6982): 522–8. Bibcode:2004Natur.428..522D. doi:10.1038/nature02379. PMC   2665288 . PMID   15057823.
• Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC   528928 . PMID   15489334.
• Wan D, Gong Y, Qin W, et al. (2004). "Large-scale cDNA transfection screening for genes related to cancer development and progression". Proc. Natl. Acad. Sci. U.S.A. 101 (44): 15724–9. Bibcode:2004PNAS..10115724W. doi: 10.1073/pnas.0404089101 . PMC   524842 . PMID   15498874.
• Schmidt U, Fuessel S, Haase M, et al. (2005). "Quantification of C13orf19/P38IP mRNA expression by quantitative real-time PCR in patients with urological malignancies". Cancer Lett. 225 (2): 253–60. doi:10.1016/j.canlet.2004.10.037. PMID   15978328.
• Kimura K, Wakamatsu A, Suzuki Y, et al. (2006). "Diversification of transcriptional modulation: Large-scale identification and characterization of putative alternative promoters of human genes". Genome Res. 16 (1): 55–65. doi:10.1101/gr.4039406. PMC   1356129 . PMID   16344560.
• Lim J, Hao T, Shaw C, et al. (2006). "A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration". Cell. 125 (4): 801–14. doi: 10.1016/j.cell.2006.03.032 . PMID   16713569.
• Zohn IE, Li Y, Skolnik EY, et al. (2006). "p38 and a p38-interacting protein are critical for downregulation of E-cadherin during mouse gastrulation". Cell. 125 (5): 957–69. doi: 10.1016/j.cell.2006.03.048 . PMID   16751104.

External links

• FactorBook SPT20