Squaramide catalysis

Last updated

Within the area of organocatalysis, squaramidecatalysis describes the use of squaramides to accelerate and stereochemically alter organic transformations. The effects arise through hydrogen-bonding interactions between the substrate and the squaramide, unlike classic catalysts, and is thus a type of hydrogen-bond catalyst. The scope of these small-molecule H-bond donors termed squaramide organocatalysis covers both non-stereoselective and stereoselective applications. [1]

Contents

Structure

General structure of squaramide organocatalyst Squaramide organocatalyst.png
General structure of squaramide organocatalyst

A squaramide organocatalyst typically contains the squaramide group and a hydrogen bond donor which is usually a tertiary amine group. The 3,5-bis(trifluoromethyl)phenyl-group is commonly used for the R group. For enantioselective squaramide catalysis, chirality is induced via the tertiary amine group. There are cases where both sides of the squaramide are tertiary amines. [1]

Catalyst-substrate interactions

Interaction between squaramide catalyst and substrate exemplified by the conjugate addition of an enolate to an unsaturated ketone Squaramide catalyst substrate interaction.png
Interaction between squaramide catalyst and substrate exemplified by the conjugate addition of an enolate to an unsaturated ketone

The interaction between the substrate and the catalyst can be seen in the image above, with the electrophile being binded to the squaramide part and the protonated nucleophile to the amine part (which increases nucleophilicity). However, it must be noted that the position of the nucleophile and electrophile switch when the electrophile can only form one hydrogen bond, as in the case of most imines. [1]

Advantages of squaramide organocatalysts

Squaramide catalysts are easily prepared from starting materials like methyl squarate, possess high activities under low catalyst loadings. Squaramide catalysis can be a replacement for thiourea organocatalysis in some scenarios. [2] [3] Squaramides have higher affinity for halide ions than thiourea. [4] Aqueous mediums can be used. [1]

Scope

H-bond accepting substrates include carbonyl compounds imines, Michael acceptors, and epoxides. The nucleophile can be nitroalkanes, enolates, and even phenols (resulting in electrophilic aromatic substitution). Subsequent cascade reactions are possible. [1] [5] [2]

History

Squaramides have been synthesized in 1966. [1] Squaramide catalysts are developed in 2008 by Jeremiah P. Malerich, Koji Hagihara, and Viresh H. Rawal. [1] [3]

Catalysts

From the general structure of squaramide catalysts, a number of catalysts have been developed, most with the aim to enable chiral catalysis.

See also

Related Research Articles

<span class="mw-page-title-main">Epoxide</span> Organic compounds with a carbon-carbon-oxygen ring

In organic chemistry, an epoxide is a cyclic ether, where the ether forms a three-atom ring: two atoms of carbon and one atom of oxygen. This triangular structure has substantial ring strain, making epoxides highly reactive, more so than other ethers. They are produced on a large scale for many applications. In general, low molecular weight epoxides are colourless and nonpolar, and often volatile.

<span class="mw-page-title-main">Enamine</span> Class of chemical compounds

An enamine is an unsaturated compound derived by the condensation of an aldehyde or ketone with a secondary amine. Enamines are versatile intermediates.

<span class="mw-page-title-main">Enantioselective synthesis</span> Chemical reaction(s) which favor one chiral isomer over another

Enantioselective synthesis, also called asymmetric synthesis, is a form of chemical synthesis. It is defined by IUPAC as "a chemical reaction in which one or more new elements of chirality are formed in a substrate molecule and which produces the stereoisomeric products in unequal amounts."

<span class="mw-page-title-main">Michael addition reaction</span> Reaction in organic chemistry

In organic chemistry, the Michael reaction or Michael 1,4 addition is a reaction between a Michael donor and a Michael acceptor to produce a Michael adduct by creating a carbon-carbon bond at the acceptor's β-carbon. It belongs to the larger class of conjugate additions and is widely used for the mild formation of carbon-carbon bonds.

<span class="mw-page-title-main">Nucleophilic conjugate addition</span> Organic reaction

Nucleophilic conjugate addition is a type of organic reaction. Ordinary nucleophilic additions or 1,2-nucleophilic additions deal mostly with additions to carbonyl compounds. Simple alkene compounds do not show 1,2 reactivity due to lack of polarity, unless the alkene is activated with special substituents. With α,β-unsaturated carbonyl compounds such as cyclohexenone it can be deduced from resonance structures that the β position is an electrophilic site which can react with a nucleophile. The negative charge in these structures is stored as an alkoxide anion. Such a nucleophilic addition is called a nucleophilic conjugate addition or 1,4-nucleophilic addition. The most important active alkenes are the aforementioned conjugated carbonyls and acrylonitriles.

<span class="mw-page-title-main">Johnson–Corey–Chaykovsky reaction</span> Chemical reaction in organic chemistry

The Johnson–Corey–Chaykovsky reaction is a chemical reaction used in organic chemistry for the synthesis of epoxides, aziridines, and cyclopropanes. It was discovered in 1961 by A. William Johnson and developed significantly by E. J. Corey and Michael Chaykovsky. The reaction involves addition of a sulfur ylide to a ketone, aldehyde, imine, or enone to produce the corresponding 3-membered ring. The reaction is diastereoselective favoring trans substitution in the product regardless of the initial stereochemistry. The synthesis of epoxides via this method serves as an important retrosynthetic alternative to the traditional epoxidation reactions of olefins.

α-Halo ketone

In organic chemistry, an α-halo ketone is a functional group consisting of a ketone group or more generally a carbonyl group with an α-halogen substituent. α-Halo ketones are alkylating agents. Prominent α-halo ketones include phenacyl bromide and chloroacetone.

<span class="mw-page-title-main">Petasis reaction</span>

The Petasis reaction is the multi-component reaction of an amine, a carbonyl, and a vinyl- or aryl-boronic acid to form substituted amines.

In chemistry, transfer hydrogenation is a chemical reaction involving the addition of hydrogen to a compound from a source other than molecular H2. It is applied in laboratory and industrial organic synthesis to saturate organic compounds and reduce ketones to alcohols, and imines to amines. It avoids the need for high-pressure molecular H2 used in conventional hydrogenation. Transfer hydrogenation usually occurs at mild temperature and pressure conditions using organic or organometallic catalysts, many of which are chiral, allowing efficient asymmetric synthesis. It uses hydrogen donor compounds such as formic acid, isopropanol or dihydroanthracene, dehydrogenating them to CO2, acetone, or anthracene respectively. Often, the donor molecules also function as solvents for the reaction. A large scale application of transfer hydrogenation is coal liquefaction using "donor solvents" such as tetralin.

<span class="mw-page-title-main">Organocatalysis</span> Method in organic chemistry

In organic chemistry, organocatalysis is a form of catalysis in which the rate of a chemical reaction is increased by an organic catalyst. This "organocatalyst" consists of carbon, hydrogen, sulfur and other nonmetal elements found in organic compounds. Because of their similarity in composition and description, they are often mistaken as a misnomer for enzymes due to their comparable effects on reaction rates and forms of catalysis involved.

Asymmetric hydrogenation is a chemical reaction that adds two atoms of hydrogen to a target (substrate) molecule with three-dimensional spatial selectivity. Critically, this selectivity does not come from the target molecule itself, but from other reagents or catalysts present in the reaction. This allows spatial information to transfer from one molecule to the target, forming the product as a single enantiomer. The chiral information is most commonly contained in a catalyst and, in this case, the information in a single molecule of catalyst may be transferred to many substrate molecules, amplifying the amount of chiral information present. Similar processes occur in nature, where a chiral molecule like an enzyme can catalyse the introduction of a chiral centre to give a product as a single enantiomer, such as amino acids, that a cell needs to function. By imitating this process, chemists can generate many novel synthetic molecules that interact with biological systems in specific ways, leading to new pharmaceutical agents and agrochemicals. The importance of asymmetric hydrogenation in both academia and industry contributed to two of its pioneers — William Standish Knowles and Ryōji Noyori — being collectively awarded one half of the 2001 Nobel Prize in Chemistry.

Within the area of organocatalysis, (thio)urea organocatalysis describes the use of ureas and thioureas to accelerate and stereochemically alter organic transformations. The effects arise through hydrogen-bonding interactions between the substrate and the (thio)urea. Unlike classical catalysts, these organocatalysts interact by non-covalent interactions, especially hydrogen bonding. The scope of these small-molecule H-bond donors termed (thio)urea organocatalysis covers both non-stereoselective and stereoselective reactions.

<span class="mw-page-title-main">Hydrogenation of carbon–nitrogen double bonds</span>

In chemistry, the hydrogenation of carbon–nitrogen double bonds is the addition of the elements of dihydrogen (H2) across a carbon–nitrogen double bond, forming amines or amine derivatives. Although a variety of general methods have been developed for the enantioselective hydrogenation of ketones, methods for the hydrogenation of carbon–nitrogen double bonds are less general. Hydrogenation of imines is complicated by both syn/anti isomerization and tautomerization to enamines, which may be hydrogenated with low enantioselectivity in the presence of a chiral catalyst. Additionally, the substituent attached to nitrogen affects both the reactivity and spatial properties of the imine, complicating the development of a general catalyst system for imine hydrogenation. Despite these challenges, methods have been developed that address particular substrate classes, such as N-aryl, N-alkyl, and endocyclic imines.

In organic chemistry, the Baylis–Hillman, Morita–Baylis–Hillman, or MBH reaction is a carbon-carbon bond-forming reaction between an activated alkene and a carbon electrophile in the presence of a nucleophilic catalyst, such as a tertiary amine or phosphine. The product is densely functionalized, joining the alkene at the α-position to a reduced form of the electrophile.

<span class="mw-page-title-main">Hydrogen-bond catalysis</span>

Hydrogen-bond catalysis is a type of organocatalysis that relies on use of hydrogen bonding interactions to accelerate and control organic reactions. In biological systems, hydrogen bonding plays a key role in many enzymatic reactions, both in orienting the substrate molecules and lowering barriers to reaction. The field is relatively undeveloped compared to research in Lewis acid catalysis.

<span class="mw-page-title-main">Synergistic catalysis</span>

Synergistic catalysis is a specialized approach to catalysis whereby at least two different catalysts act on two different substrates simultaneously to allow reaction between the two activated materials. While a catalyst works to lower the energy of reaction overall, a reaction using synergistic catalysts work together to increase the energy level of HOMO of one of the molecules and lower the LUMO of another. While this concept has come to be important in developing synthetic pathways, this strategy is commonly found in biological systems as well.

<span class="mw-page-title-main">Ugi's amine</span> Chemical compound

Ugi’s amine is an organometallic compound with the formula (C5H5)Fe(C5H4CH N 2. It is named for the chemist who first reported its synthesis in 1970, Ivar Ugi. It is a ferrocene derivative. Ugi’s amine is a precursor to ligands, most notably, the Josiphos ligands, which have been used in asymmetric catalysis

<span class="mw-page-title-main">Phosphoramidite ligand</span>

A phosphoramidite ligand is any phosphorus-based ligand with the general formula P(OR1)(OR2)(NRR'). Chiral versions of these ligands, particularly those derived from the BINOL scaffold, are widely used in enantioselective synthesis. The application of phosphoramidites as effective monodentate ligands for transition metal catalysis was first reported by Dutch chemist Ben Feringa. The introduction of phosphoramidite ligands challenged the notion that high flexibility in the metal–ligand complex is detrimental for high stereocontrol.

<span class="mw-page-title-main">Nitro-Mannich reaction</span> Chemical reaction

The nitro-Mannich reaction is the nucleophilic addition of a nitroalkane to an imine, resulting in the formation of a beta-nitroamine. With the reaction involving the addition of an acidic carbon nucleophile to a carbon-heteroatom double bond, the nitro-Mannich reaction is related to some of the most fundamental carbon-carbon bond forming reactions in organic chemistry, including the aldol reaction, Henry reaction and Mannich reaction.

The ketimine Mannich reaction is an asymmetric synthetic technique using differences in starting material to push a Mannich reaction to create an enantiomeric product with steric and electronic effects, through the creation of a ketimine group. Typically, this is done with a reaction with proline or another nitrogen-containing heterocycle, which control chirality with that of the catalyst. This has been theorized to be caused by the restriction of undesired (E)-isomer by preventing the ketone from accessing non-reactive tautomers. Generally, a Mannich reaction is the combination of an amine, a ketone with a β-acidic proton and aldehyde to create a condensed product in a β-addition to the ketone. This occurs through an attack on the ketone with a suitable catalytic-amine unto its electron-starved carbon, from which an imine is created. This then undergoes electrophilic addition with a compound containing an acidic proton. It is theoretically possible for either of the carbonyl-containing molecules to create diastereomers, but with the addition of catalysts which restrict addition as of the enamine creation, it is possible to extract a single product with limited purification steps and in some cases as reported by List et al.; practical one-pot syntheses are possible. The process of selecting a carbonyl-group gives the reaction a direct versus indirect distinction, wherein the latter case represents pre-formed products restricting the reaction's pathway and the other does not. Ketimines selects a reaction group, and circumvent a requirement for indirect pathways.

References

  1. 1 2 3 4 5 6 7 8 9 10 11 Popova, E. A.; Pronina, Yu. A.; Davtian, A. V.; Nepochatyi, G. D.; Petrov, M. L.; Boitsov, V. M.; Stepakov, A. V. (2022-03-01). "Squaramide-Based Catalysts in Organic Synthesis (A Review)". Russian Journal of General Chemistry. 92 (3): 287–347. doi:10.1134/S107036322203001X. ISSN   1608-3350.
  2. 1 2 Chauhan, Pankaj; Mahajan, Suruchi; Kaya, Uğur; Hack, Daniel; Enders, Dieter (2015-02-09). "Bifunctional Amine-Squaramides: Powerful Hydrogen-Bonding Organocatalysts for Asymmetric Domino/Cascade Reactions". Advanced Synthesis & Catalysis. 357 (2–3): 253–281. doi:10.1002/adsc.201401003. ISSN   1615-4150.
  3. 1 2 3 Malerich, Jeremiah P.; Hagihara, Koji; Rawal, Viresh H. (2008-11-05). "Chiral Squaramide Derivatives are Excellent Hydrogen Bond Donor Catalysts". Journal of the American Chemical Society. 130 (44): 14416–14417. doi:10.1021/ja805693p. ISSN   0002-7863. PMC   2701638 . PMID   18847268.
  4. Busschaert, Nathalie; Kirby, Isabelle L.; Young, Sarah; Coles, Simon J.; Horton, Peter N.; Light, Mark E.; Gale, Philip A. (2012-04-27). "Squaramides as Potent Transmembrane Anion Transporters". Angewandte Chemie International Edition. 51 (18): 4426–4430. doi:10.1002/anie.201200729. ISSN   1433-7851. PMID   22461434.
  5. Zhao, Bo-Liang; Du, Da-Ming (2016-12-22). "Squaramide-Catalyzed Enantioselective Cascade Approach to Bispirooxindoles with Multiple Stereocenters". Advanced Synthesis & Catalysis. 358 (24): 3992–3998. doi:10.1002/adsc.201600782. ISSN   1615-4150.