Tetratricopeptide repeat domain 21b

Last updated
TTC21B
Identifiers
Aliases TTC21B , ATD4, IFT139, JBTS11, NPHP12, SRTD4, THM1, Nbla10696, IFT139B, tetratricopeptide repeat domain 21B, FAP60, FLA17
External IDs OMIM: 612014 MGI: 1920918 HomoloGene: 57006 GeneCards: TTC21B
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_024753

NM_001047604
NM_001290669

RefSeq (protein)

NP_079029

NP_001041069
NP_001277598

Location (UCSC) Chr 2: 165.86 – 165.95 Mb Chr 2: 66.18 – 66.26 Mb
PubMed search [3] [4]
Wikidata
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Tetratricopeptide repeat domain 21B is a protein that in humans is encoded by the TTC21B gene. [5]

Contents

Function

This gene encodes a member of TTC21 family, containing several tetratricopeptide repeat (TPR) domains. This protein is localized to the cilium axoneme, and may play a role in retrograde intraflagellar transport in cilia. Mutations in this gene are associated with various ciliopathies, nephronophthisis 12, and asphyxiating thoracic dystrophy 4. [provided by RefSeq, Oct 2011].

Related Research Articles

Nephronophthisis Medical condition

Nephronophthisis is a genetic disorder of the kidneys which affects children. It is classified as a medullary cystic kidney disease. The disorder is inherited in an autosomal recessive fashion and, although rare, is the most common genetic cause of childhood kidney failure. It is a form of ciliopathy. Its incidence has been estimated to be 0.9 cases per million people in the United States, and 1 in 50,000 births in Canada.

NPHS2

Podocin is a protein that in humans is encoded by the NPHS2 gene.

NPHP1

Nephrocystin-1 is a protein that in humans is encoded by the NPHP1 gene.

AHI1

The Abelson helper integration site 1 (AHI1) is a protein coding gene that is known for the critical role it plays in brain development. Proper cerebellar and cortical development in the human brain depends heavily on AHI1. The AHI1 gene is prominently expressed in the embryonic hindbrain and forebrain. AHI1 specifically encodes the Jouberin protein and mutations in the expression of the gene is known to cause specific forms of Joubert syndrome. Joubert syndrome is autosomal recessive and is characterized by the brain malformations and mental retardation that AHI1 mutations have the potential to induce. AHI1 has also been associated with schizophrenia and autism due to the role it plays in brain development. An AHI1 heterozygous knockout mouse model was studied by Bernard Lerer and his group at Hadassah Medical Center in Jerusalem to elucidate the correlation between alterations in AHI1 expression and the pathogenesis of neuropsychiatric disorders. The core temperatures and corticosterone secretions of the heterozygous knockout mice after exposure to environmental and visceral stress exhibited extreme repression of autonomic nervous system and hypothalamic-pituitary-adrenal responses. The knockout mice demonstrated an increased resilience to different types of stress and these results lead to a correlation between emotional regulation and neuropsychiatric disorders.

CEP290

Centrosomal protein of 290 kDa is a protein that in humans is encoded by the CEP290 gene. CEP290 is located on the Q arm of chromosome 12.

INVS

Inversin is a protein that in humans is encoded by the INVS gene.

DYX1C1

Dyslexia susceptibility 1 candidate gene 1 protein is a protein that in humans is encoded by the DYX1C1 gene. This protein contains 420-amino acids with 3 tetratricopeptide repeat (TPR) domains, thought to mediate protein–protein interactions.

NPHP4

Nephrocystin-4 is a protein that in humans is encoded by the NPHP4 gene.

MALL

MAL-like protein is a protein that in humans is encoded by the MALL gene.

IQCB1

IQ calmodulin-binding motif-containing protein 1 is a protein that in humans is encoded by the IQCB1 gene.

NPHP3

Nephrocystin-3 is a protein that in humans is encoded by the NPHP3 gene.

TTC3

Tetratricopeptide repeat protein 3 is a protein that in humans is encoded by the TTC3 gene.

SDCCAG8

Serologically defined colon cancer antigen 8 is a protein that in humans is encoded by the SDCCAG8 gene. This protein localizes to the centrioles.

TTC4

Tetratricopeptide repeat protein 4 is a protein that in humans is encoded by the TTC4 gene.

TMEM67

Meckelin is a protein that in humans is encoded by the TMEM67 gene.

TTC8

Tetratricopeptide repeat domain 8 (TTC8) also known as Bardet–Biedl syndrome 8 is a protein that in humans is encoded by the TTC8 gene.

LRRC50

Leucine-rich repeat-containing protein 50 is a protein that in humans is encoded by the LRRC50 gene.

Xaa-Pro aminopeptidase 3, also known as aminopeptidase P3, is an enzyme that in humans is encoded by the XPNPEP3 gene. XPNPEP3 localizes to mitochondria in renal cells and to kidney tubules in a cell type-specific pattern. Mutations in XPNPEP3 gene have been identified as a cause of a nephronophthisis-like disease.

NEK8

Serine/threonine-protein kinase Nek8, also known as never in mitosis A-related kinase 8, is an enzyme that in humans is encoded by the NEK8 gene.

TTC7A

Tetratricopeptide repeat domain 7A (TTC7A) is a protein that in humans is encoded by the TTC7A gene.

References

  1. 1 2 3 GRCh38: Ensembl release 89: ENSG00000123607 - Ensembl, May 2017
  2. 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000034848 - Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. "Entrez Gene: Tetratricopeptide repeat domain 21B" . Retrieved 2018-10-23.

Further reading


This article incorporates text from the United States National Library of Medicine, which is in the public domain.