UBL3

UBL3
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 2GOW
Identifiers
Aliases	UBL3 , HCG-1, PNSC1, ubiquitin like 3
External IDs	OMIM: 604711; MGI: 1344373; HomoloGene: 5153; GeneCards: UBL3; OMA:UBL3 - orthologs
Gene location (Human) Chr. Chromosome 13 (human) [1] Band 13q12.3 Start 29,764,371 bp [1] End 29,850,617 bp [1]
Gene location (Mouse) Chr. Chromosome 5 (mouse) [2] Band 5|5 G3 Start 148,504,635 bp [2] End 148,552,789 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in inferior olivary nucleus amniotic fluid dorsal motor nucleus of vagus nerve pars reticulata subthalamic nucleus pars compacta external globus pallidus superior vestibular nucleus postcentral gyrus Region I of hippocampus proper Top expressed in extensor digitorum longus muscle Rostral migratory stream plantaris muscle corneal stroma extraocular muscle olfactory epithelium cardiac muscle tissue of left ventricle CA3 field dorsal striatum spermatid More reference expression data BioGPS More reference expression data
Orthologs Species Human Mouse Entrez 5412 24109 Ensembl ENSG00000122042 ENSMUSG00000001687 UniProt O95164 Q9Z2M6 RefSeq (mRNA) NM_007106 NM_011908 RefSeq (protein) NP_009037 NP_036038 NP_001346128 NP_001346129 NP_001346130 NP_001346131 Location (UCSC) Chr 13: 29.76 – 29.85 Mb Chr 5: 148.5 – 148.55 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Ubiquitin-like protein 3 is a protein that in humans is encoded by the UBL3 gene. ^{[5] [6]}

In melanocytic cells UBL3 gene expression may be regulated by MITF. ^[7]

References

1. GRCh38: Ensembl release 89: ENSG00000122042 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000001687 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Chadwick BP, Kidd T, Sgouros J, Ish-Horowicz D, Frischauf AM (Aug 1999). "Cloning, mapping and expression of UBL3, a novel ubiquitin-like gene". Gene. 233 (1–2): 189–95. doi:10.1016/S0378-1119(99)00138-9. PMID   10375635.
6. "Entrez Gene: UBL3 ubiquitin-like 3".
7. Hoek KS, Schlegel NC, Eichhoff OM, et al. (2008). "Novel MITF targets identified using a two-step DNA microarray strategy". Pigment Cell Melanoma Res. 21 (6): 665–76. doi: 10.1111/j.1755-148X.2008.00505.x . PMID   19067971.

Further reading

• Hartley JL, Temple GF, Brasch MA (2001). "DNA cloning using in vitro site-specific recombination". Genome Res. 10 (11): 1788–95. doi:10.1101/gr.143000. PMC   310948 . PMID   11076863.
• Wiemann S, Weil B, Wellenreuther R, et al. (2001). "Toward a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs". Genome Res. 11 (3): 422–35. doi:10.1101/gr.GR1547R. PMC   311072 . PMID   11230166.
• Simpson JC, Wellenreuther R, Poustka A, et al. (2001). "Systematic subcellular localization of novel proteins identified by large-scale cDNA sequencing". EMBO Rep. 1 (3): 287–92. doi:10.1093/embo-reports/kvd058. PMC   1083732 . PMID   11256614.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi: 10.1073/pnas.242603899 . PMC   139241 . PMID   12477932.
• Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi: 10.1038/ng1285 . PMID   14702039.
• Dunham A, Matthews LH, Burton J, et al. (2004). "The DNA sequence and analysis of human chromosome 13". Nature. 428 (6982): 522–8. Bibcode:2004Natur.428..522D. doi:10.1038/nature02379. PMC   2665288 . PMID   15057823.
• Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC   528928 . PMID   15489334.
• Wiemann S, Arlt D, Huber W, et al. (2004). "From ORFeome to biology: a functional genomics pipeline". Genome Res. 14 (10B): 2136–44. doi:10.1101/gr.2576704. PMC   528930 . PMID   15489336.
• Mehrle A, Rosenfelder H, Schupp I, et al. (2006). "The LIFEdb database in 2006". Nucleic Acids Res. 34 (Database issue): D415–8. doi:10.1093/nar/gkj139. PMC   1347501 . PMID   16381901.
• Downes BP, Saracco SA, Lee SS, et al. (2006). "MUBs, a family of ubiquitin-fold proteins that are plasma membrane-anchored by prenylation". J. Biol. Chem. 281 (37): 27145–57. doi: 10.1074/jbc.M602283200 . PMID   16831869.