ZFYVE16

Last updated
ZFYVE16
Available structures
PDB Ortholog search: PDBe RCSB
Identifiers
Aliases ZFYVE16 , PPP1R69, zinc finger FYVE-type containing 16
External IDs OMIM: 608880 MGI: 2145181 HomoloGene: 8826 GeneCards: ZFYVE16
Gene location (Human)
Ideogram human chromosome 5.svg
Chr. Chromosome 5 (human) [1]
Human chromosome 5 ideogram.svg
HSR 1996 II 3.5e.svg
Red rectangle 2x18.png
Band 5q14.1Start80,408,013 bp [1]
End80,483,379 bp [1]
RNA expression pattern
PBB GE ZFYVE16 203651 at fs.png
More reference expression data
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_001105251
NM_001284236
NM_001284237
NM_014733
NM_001349434

Contents

NM_173392

RefSeq (protein)

NP_001098721
NP_001271165
NP_001271166
NP_055548
NP_001336363

NP_775568

Location (UCSC) Chr 5: 80.41 – 80.48 Mb n/a
PubMed search [2] [3]
Wikidata
View/Edit Human View/Edit Mouse

Zinc finger FYVE domain-containing protein 16 is a protein that in humans is encoded by the ZFYVE16 gene. [4] [5]

The ZFYVE16 gene encodes endofin, an endosomal protein implicated in regulating membrane trafficking. It is characterized by the presence of a phosphatidylinositol 3-phosphate-binding FYVE domain positioned in the middle of the molecule (Seet et al., 2004).[supplied by OMIM] [5]

In melanocytic cells ZFYVE16 gene expression may be regulated by MITF. [6]

Interactions

ZFYVE16 has been shown to interact with TOM1. [7]

Related Research Articles

GRB2 protein-coding gene in the species Homo sapiens

Growth factor receptor-bound protein 2 also known as Grb2 is an adaptor protein involved in signal transduction/cell communication. In humans, the GRB2 protein is encoded by the GRB2 gene.

Microphthalmia-associated transcription factor mammalian protein found in Homo sapiens

Microphthalmia-associated transcription factor also known as class E basic helix-loop-helix protein 32 or bHLHe32 is a protein that in humans is encoded by the MITF gene.

ZAP70 protein-coding gene in the species Homo sapiens

ZAP-70 is a protein normally expressed near the surface membrane of T cells and natural killer cells. It is part of the T cell receptor, and plays a critical role in T-cell signaling. Its molecular weight is 70 kDa, and it is a member of the protein-tyrosine kinase family.

FYVE domain InterPro Domain

In molecular biology the FYVE zinc finger domain is named after the four cysteine-rich proteins: Fab 1, YOTB, Vac 1, and EEA1, in which it has been found. FYVE domains bind Phosphatidylinositol 3-phosphate, in a way dependent on its metal ion coordination and basic amino acids. The FYVE domain inserts into cell membranes in a pH-dependent manner. The FYVE domain has been connected to vacuolar protein sorting and endosome function.

CD22 mammalian protein found in Homo sapiens

CD22, or cluster of differentiation-22, is a molecule belonging to the SIGLEC family of lectins. It is found on the surface of mature B cells and to a lesser extent on some immature B cells. Generally speaking, CD22 is a regulatory molecule that prevents the overactivation of the immune system and the development of autoimmune diseases.

Caveolin 1 protein-coding gene in the species Homo sapiens

Caveolin-1 is a protein that in humans is encoded by the CAV1 gene.

HCK protein-coding gene in the species Homo sapiens

Tyrosine-protein kinase HCK is an enzyme that in humans is encoded by the HCK gene.

DUSP1 protein-coding gene in the species Homo sapiens

Dual specificity protein phosphatase 1 is an enzyme that in humans is encoded by the DUSP1 gene.

FER (gene) protein-coding gene in the species Homo sapiens

Proto-oncogene tyrosine-protein kinase FER is an enzyme that in humans is encoded by the FER gene.

BMX (gene) protein-coding gene in the species Homo sapiens

Cytoplasmic tyrosine-protein kinase BMX is an enzyme that in humans is encoded by the BMX gene.

STAM2 protein-coding gene in the species Homo sapiens

Signal transducing adapter molecule 2 is a protein that in humans is encoded by the STAM2 gene.

STX7 protein-coding gene in the species Homo sapiens

Syntaxin-7 is a protein that in humans is encoded by the STX7 gene.

PIKFYVE protein-coding gene in the species Homo sapiens

PIKfyve, a FYVE finger-containing phosphoinositide kinase, is an enzyme that in humans is encoded by the PIKFYVE gene.

Intersectin 2 gene of the species Homo sapiens

Intersectin-2 is a protein that in humans is encoded by the ITSN2 gene.

TOM1 protein-coding gene in the species Homo sapiens

Target of Myb protein 1 is a protein that in humans is encoded by the TOM1 gene.

LPXN protein-coding gene in the species Homo sapiens

Leupaxin is a protein that in humans is encoded by the LPXN gene.

DCLK1 protein-coding gene in the species Homo sapiens

Serine/threonine-protein kinase DCLK1 is an enzyme that in humans is encoded by the DCLK1 gene.

Sodium/hydrogen exchanger 6 Protein-coding gene in the species Homo sapiens

Sodium/hydrogen exchanger 6 is an integral membrane protein that in humans is encoded by the SLC9A6 gene. It was originally thought to be a mitochondrial-targeted protein, but subsequent studies have localized it to the plasma membrane and recycling endosomes.

SNAG1 protein-coding gene in the species Homo sapiens

Sorting nexin-18 is a protein that in humans is encoded by the SNX18 gene.

DCBLD2 protein-coding gene in the species Homo sapiens

Discoidin, CUB and LCCL domain-containing protein 2 is a protein that in humans is encoded by the DCBLD2 gene.

References

  1. 1 2 3 GRCh38: Ensembl release 89: ENSG00000039319 - Ensembl, May 2017
  2. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  3. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. Seet LF, Hong W (November 2001). "Endofin, an endosomal FYVE domain protein". The Journal of Biological Chemistry. 276 (45): 42445–54. doi: 10.1074/jbc.M105917200 . PMID   11546807.
  5. 1 2 "Entrez Gene: ZFYVE16 zinc finger, FYVE domain containing 16".
  6. Hoek KS, Schlegel NC, Eichhoff OM, Widmer DS, Praetorius C, Einarsson SO, et al. (December 2008). "Novel MITF targets identified using a two-step DNA microarray strategy". Pigment Cell & Melanoma Research. 21 (6): 665–76. doi:10.1111/j.1755-148X.2008.00505.x. PMID   19067971. S2CID   24698373.
  7. Seet LF, Liu N, Hanson BJ, Hong W (February 2004). "Endofin recruits TOM1 to endosomes". The Journal of Biological Chemistry. 279 (6): 4670–9. doi: 10.1074/jbc.M311228200 . PMID   14613930.

Further reading