ZRANB2

ZRANB2
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 1N0Z, 2K1P, 3G9Y
Identifiers
Aliases	ZRANB2 , ZIS, ZIS1, ZIS2, ZNF265, zinc finger RANBP2-type containing 2
External IDs	OMIM: 604347; MGI: 1858211; HomoloGene: 135921; GeneCards: ZRANB2; OMA:ZRANB2 - orthologs
Gene location (Human) Chr. Chromosome 1 (human) [1] Band 1p31.1 Start 71,063,291 bp [1] End 71,081,289 bp [1]
Gene location (Mouse) Chr. Chromosome 3 (mouse) [2] Band 3|3 H4 Start 157,239,797 bp [2] End 157,254,047 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in pancreatic epithelial cell mucosa of ileum Achilles tendon cardiac muscle tissue of right atrium corpus epididymis caput epididymis tibialis anterior muscle anterior pituitary tibia myocardium of left ventricle Top expressed in genital tubercle tail of embryo medullary collecting duct neural layer of retina renal corpuscle cerebellar cortex atrioventricular valve olfactory bulb vestibular membrane of cochlear duct primitive streak More reference expression data BioGPS n/a
Gene ontology Molecular function DNA-binding transcription factor activity protein binding metal ion binding RNA binding lipopolysaccharide binding Cellular component nucleus nucleoplasm Biological process mRNA processing RNA splicing regulation of transcription, DNA-templated Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 9406 53861 Ensembl ENSG00000132485 ENSMUSG00000028180 UniProt O95218 Q9R020 RefSeq (mRNA) NM_005455 NM_203350 NM_017381 NM_001355381 NM_001355386 RefSeq (protein) NP_005446 NP_976225 NP_059077 NP_001342310 NP_001342315 Location (UCSC) Chr 1: 71.06 – 71.08 Mb Chr 3: 157.24 – 157.25 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Zinc finger Ran-binding domain-containing protein 2 is a protein that in humans is encoded by the ZRANB2 gene. ^{[5] [6]}

Interactions

ZRANB2 has been shown to interact with U2 small nuclear RNA auxiliary factor 1 ^[7] and SNRP70. ^[7]

References

1. GRCh38: Ensembl release 89: ENSG00000132485 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000028180 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Nakano M, Yoshiura K, Oikawa M, Miyoshi O, Yamada K, Kondo S, Miwa N, Soeda E, Jinno Y, Fujii T, Niikawa N (February 1999). "Identification, characterization and mapping of the human ZIS (zinc-finger, splicing) gene". Gene. 225 (1–2): 59–65. doi:10.1016/S0378-1119(98)00536-8. PMID   9931435.
6. "Entrez Gene: ZRANB2 zinc finger, RAN-binding domain containing 2".
7. Adams DJ, van der Weyden L, Mayeda A, Stamm S, Morris BJ, Rasko JE (July 2001). "ZNF265--a novel spliceosomal protein able to induce alternative splicing". J. Cell Biol. 154 (1): 25–32. doi:10.1083/jcb.200010059. PMC   2196870 . PMID   11448987.

Further reading

• Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–174. doi:10.1016/0378-1119(94)90802-8. PMID   8125298.
• Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, Suyama A, Sugano S (1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–156. doi:10.1016/S0378-1119(97)00411-3. PMID   9373149.
• Adams DJ, van der Weyden L, Kovacic A, Lovicu FJ, Copeland NG, Gilbert DJ, Jenkins NA, Ioannou PA, Morris BJ (2000). "Chromosome localization and characterization of the mouse and human zinc finger protein 265 gene". Cytogenet. Cell Genet. 88 (1–2): 68–73. doi:10.1159/000015487. PMID   10773668. S2CID   43262249.
• Wiemann S, Weil B, Wellenreuther R, Gassenhuber J, Glassl S, Ansorge W, Böcher M, Blöcker H, Bauersachs S, Blum H, Lauber J, Düsterhöft A, Beyer A, Köhrer K, Strack N, Mewes HW, Ottenwälder B, Obermaier B, Tampe J, Heubner D, Wambutt R, Korn B, Klein M, Poustka A (2001). "Toward a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs". Genome Res. 11 (3): 422–435. doi:10.1101/gr.GR1547R. PMC   311072 . PMID   11230166.
• Suzuki Y, Tsunoda T, Sese J, Taira H, Mizushima-Sugano J, Hata H, Ota T, Isogai T, Tanaka T, Nakamura Y, Suyama A, Sakaki Y, Morishita S, Okubo K, Sugano S (2001). "Identification and characterization of the potential promoter regions of 1031 kinds of human genes". Genome Res. 11 (5): 677–84. doi:10.1101/gr.gr-1640r. PMC   311086 . PMID   11337467.
• Adams DJ, van der Weyden L, Mayeda A, Stamm S, Morris BJ, Rasko JE (2001). "ZNF265--a novel spliceosomal protein able to induce alternative splicing". J. Cell Biol. 154 (1): 25–32. doi:10.1083/jcb.200010059. PMC   2196870 . PMID   11448987.
• Plambeck CA, Kwan AH, Adams DJ, Westman BJ, van der Weyden L, Medcalf RL, Morris BJ, Mackay JP (2003). "The structure of the zinc finger domain from human splicing factor ZNF265 fold". J. Biol. Chem. 278 (25): 22805–22811. doi: 10.1074/jbc.M301896200 . PMID   12657633.
• Li J, Hawkins IC, Harvey CD, Jennings JL, Link AJ, Patton JG (2003). "Regulation of alternative splicing by SRrp86 and its interacting proteins". Mol. Cell. Biol. 23 (21): 7437–7447. doi:10.1128/MCB.23.21.7437-7447.2003. PMC   207616 . PMID   14559993.
• Beausoleil SA, Jedrychowski M, Schwartz D, Elias JE, Villén J, Li J, Cohn MA, Cantley LC, Gygi SP (2004). "Large-scale characterization of HeLa cell nuclear phosphoproteins". Proc. Natl. Acad. Sci. U.S.A. 101 (33): 12130–12135. Bibcode:2004PNAS..10112130B. doi: 10.1073/pnas.0404720101 . PMC   514446 . PMID   15302935.
• Mangs AH, Speirs HJ, Goy C, Adams DJ, Markus MA, Morris BJ (2006). "XE7: a novel splicing factor that interacts with ASF/SF2 and ZNF265". Nucleic Acids Res. 34 (17): 4976–4986. doi:10.1093/nar/gkl660. PMC   1635291 . PMID   16982639.
• Olsen JV, Blagoev B, Gnad F, Macek B, Kumar C, Mortensen P, Mann M (2006). "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks". Cell. 127 (3): 635–648. doi: 10.1016/j.cell.2006.09.026 . PMID   17081983. S2CID   7827573.
• Ewing RM, Chu P, Elisma F, Li H, Taylor P, Climie S, McBroom-Cerajewski L, Robinson MD, O'Connor L, Li M, Taylor R, Dharsee M, Ho Y, Heilbut A, Moore L, Zhang S, Ornatsky O, Bukhman YV, Ethier M, Sheng Y, Vasilescu J, Abu-Farha M, Lambert JP, Duewel HS, Stewart II, Kuehl B, Hogue K, Colwill K, Gladwish K, Muskat B, Kinach R, Adams SL, Moran MF, Morin GB, Topaloglou T, Figeys D (2007). "Large-scale mapping of human protein-protein interactions by mass spectrometry". Mol. Syst. Biol. 3 (1): 89. doi:10.1038/msb4100134. PMC   1847948 . PMID   17353931.

External links

• ZRANB2 human gene location in the UCSC Genome Browser .
• ZRANB2 human gene details in the UCSC Genome Browser .