APBA3

APBA3
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 2YT7, 2YT8
Identifiers
Aliases	APBA3 , MGC:15815, X11L2, mint3, amyloid beta precursor protein binding family A member 3
External IDs	OMIM: 604262; MGI: 1888527; HomoloGene: 3591; GeneCards: APBA3; OMA:APBA3 - orthologs
Gene location (Human) Chr. Chromosome 19 (human) [1] Band 19p13.3 Start 3,750,772 bp [1] End 3,761,692 bp [1]
Gene location (Mouse) Chr. Chromosome 10 (mouse) [2] Band 10|10 C1 Start 81,102,794 bp [2] End 81,109,080 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in pancreatic ductal cell granulocyte right hemisphere of cerebellum right ovary left ovary blood spleen cartilage tissue lymph node gastrocnemius muscle Top expressed in muscle of thigh skeletal muscle tissue adrenal gland spermatocyte yolk sac quadriceps femoris muscle proximal tubule right kidney esophagus white adipose tissue More reference expression data BioGPS More reference expression data
Gene ontology Molecular function enzyme binding enzyme inhibitor activity amyloid-beta binding protein binding Cellular component cytoplasm perinuclear region of cytoplasm plasma membrane dendritic spine synapse Biological process protein transport regulation of catalytic activity negative regulation of catalytic activity in utero embryonic development chemical synaptic transmission regulation of gene expression Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 9546 57267 Ensembl ENSG00000011132 ENSMUSG00000004931 UniProt O96018 O88888 RefSeq (mRNA) NM_004886 NM_018758 RefSeq (protein) NP_004877 NP_061228 Location (UCSC) Chr 19: 3.75 – 3.76 Mb Chr 10: 81.1 – 81.11 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Amyloid beta A4 precursor protein-binding family A member 3 is a protein that in humans is encoded by the APBA3 gene. ^{[5] [6]}

Function

The protein encoded by this gene is a member of the X11 protein family. It is an adapter protein that interacts with the Alzheimer's disease amyloid precursor protein. This gene product is believed to be involved in signal transduction processes. This gene is a candidate gene for Alzheimer's disease. ^[6]

Interactions

APBA3 has been shown to interact with Amyloid precursor protein. ^{[5] [7]}

References

1. GRCh38: Ensembl release 89: ENSG00000011132 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000004931 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Tanahashi H, Tabira T (Apr 1999). "X11L2, a new member of the X11 protein family, interacts with Alzheimer's beta-amyloid precursor protein". Biochem Biophys Res Commun. 255 (3): 663–7. doi:10.1006/bbrc.1999.0265. PMID   10049767.
6. "Entrez Gene: APBA3 amyloid beta (A4) precursor protein-binding, family A, member 3 (X11-like 2)".
7. Biederer T, Cao X, Südhof TC, Liu X (Sep 2002). "Regulation of APP-dependent transcription complexes by Mint/X11s: differential functions of Mint isoforms". J. Neurosci. 22 (17): 7340–51. doi: 10.1523/JNEUROSCI.22-17-07340.2002 . PMC   6757996 . PMID   12196555.

External links

• Human APBA3 genome location and APBA3 gene details page in the UCSC Genome Browser .

Further reading

• Kuriyan J, Cowburn D (1997). "Modular peptide recognition domains in eukaryotic signaling". Annual Review of Biophysics and Biomolecular Structure. 26: 259–88. doi:10.1146/annurev.biophys.26.1.259. PMID   9241420.
• Morishima-Kawashima M, Ihara Y (2002). "[Recent advances in Alzheimer's disease]". Seikagaku. 73 (11): 1297–307. PMID   11831025.
• Bonaldo MF, Lennon G, Soares MB (1997). "Normalization and subtraction: two approaches to facilitate gene discovery". Genome Res. 6 (9): 791–806. doi: 10.1101/gr.6.9.791 . PMID   8889548.
• Okamoto M, Südhof TC (1999). "Mint 3: a ubiquitous mint isoform that does not bind to munc18-1 or -2". Eur. J. Cell Biol. 77 (3): 161–5. doi:10.1016/s0171-9335(98)80103-9. PMID   9860131.
• Tanahashi H, Tabira T (1999). "Genomic organization of the human X11L2 gene (APBA3), a third member of the X11 protein family interacting with Alzheimer's beta-amyloid precursor protein". NeuroReport. 10 (12): 2575–8. doi:10.1097/00001756-199908200-00025. PMID   10574372.
• Okamoto M, Nakajima Y, Matsuyama T, Sugita M (2001). "Amyloid precursor protein associates independently and collaboratively with PTB and PDZ domains of mint on vesicles and at cell membrane". Neuroscience. 104 (3): 653–65. doi:10.1016/S0306-4522(01)00124-5. PMID   11440799. S2CID   39280897.
• Wang P, Wang X, Pei D (2004). "Mint-3 regulates the retrieval of the internalized membrane-type matrix metalloproteinase, MT5-MMP, to the plasma membrane by binding to its carboxyl end motif EWV". J. Biol. Chem. 279 (19): 20461–70. doi: 10.1074/jbc.M400264200 . PMID   14990567.
• Malmberg EK, Andersson CX, Gentzsch M, Chen JH, Mengos A, Cui L, Hansson GC, Riordan JR (2005). "Bcr (breakpoint cluster region) protein binds to PDZ-domains of scaffold protein PDZK1 and vesicle coat protein Mint3". J. Cell Sci. 117 (Pt 23): 5535–41. doi: 10.1242/jcs.01472 . PMID   15494376.

External links

• PDBe-KB provides an overview of all the structure information available in the PDB for Human Amyloid-beta A4 precursor protein-binding family A member 3 (APBA3)