Aindrila Mukhopadhyay

Last updated
Aindrila Mukhopadhyay
Born
Alma mater University of Chicago
Indian Institute of Technology
Isabella Thoburn College
Scientific career
Institutions Lawrence Berkeley National Laboratory
Emory University
Thesis Initiating lateral gene transfer : analysis of the VirA/VirG two component system in vivo  (2002)

Aindrila Mukhopadhyay is an American scientist who is the Division Deputy of the Biological Systems and Engineering Division at Lawrence Berkeley National Laboratory. Her research involves microbial engineering for the production of biofuels. She was nominated a Fellow of the American Association for the Advancement of Science in 2022.

Contents

Early life and education

Mukhopadhyay is from West Bengal, India. [1] Her father is a surgeon and a painter. [1] She was a bachelor's student in chemistry and zoology at the Isabella Thoburn College. For her postdoctoral research, she studied chemistry at the Indian Institute of Technology. [2] She moved to the University of Chicago in 1996, where she worked toward a doctorate in organic chemistry. [2] She held a joint position at Emory University. After earning her doctorate, Mukhopadhyay joined Lawrence Berkeley National Laboratory as a postdoctoral researcher.[ citation needed ]

Research and career

Mukhopadhyay leads biological systems and engineering at the Lawrence Berkeley National Laboratory, where she engineers microbes to make sustainable and low-cost chemicals. [3] [4] She studies biological processes (e.g. stress response, signaling and membrane transport) in microbial systems. [5] Mukhopadhyay makes use of a variety of biochemical approaches to understand environmentally important model (sulphate and cyanobacteria) and non-model organisms ( Pseudomonas stutzeri , Desulfovibrio vulgaris and Agrobacterium tumefaciens ). She is part of the United States Department of Energy Enigma project. [6] [7]

Mukhopadhyay combines protein and host engineering to improve the production fuels, using microbes such as Escherichia coli and Corynebacterium glutamicum. In 2016, Mukhopadhyay engineered a bacterial strain that can permit the one-pot production of biofuels from a slurry. [8] The strain had an amino acid mutation on the rcd gene, and was particularly tolerant to ionic liquids. [9]

Alongside her work on biofuels, Mukhopadhyay has investigated environmentally-friendly pigments. [10] She investigated how well Rhodosporidium toruloides can express nonribosomal peptide synthetases. She showed that Rhodosporidium toruloides (a fungus) bioengineered to convert amino acid molecules into indigoidine, a blue pigment that can be used in the textile industry. [10] She showed that for every liter of bioreactor culture it was possible to generate 86 grams of indigoidine, which was the highest yield ever reported. [10]

Muchpadhyay is vice president of the Biofuels and Bioproducts Division at the Joint BioEnergy Institute (JBEI), where she oversees host engineering. [11]

Awards and honors

Selected publications

Personal life

Mukhopadhyay is an artist. [1]

Related Research Articles

<span class="mw-page-title-main">Lawrence Berkeley National Laboratory</span> National laboratory located near Berkeley, California, U.S.

Lawrence Berkeley National Laboratory (LBNL) is a federally funded research and development center in the hills of Berkeley, California, United States. Established in 1931 by the University of California (UC), the laboratory is sponsored by the United States Department of Energy and administered by the UC system. Ernest Lawrence, who won the Nobel prize for inventing the cyclotron, founded the Lab and served as its Director until his death in 1958. Located in the Berkeley Hills, the lab overlooks the campus of the University of California, Berkeley.

Cellulosic ethanol is ethanol produced from cellulose rather than from the plant's seeds or fruit. It can be produced from grasses, wood, algae, or other plants. It is generally discussed for use as a biofuel. The carbon dioxide that plants absorb as they grow offsets some of the carbon dioxide emitted when ethanol made from them is burned, so cellulosic ethanol fuel has the potential to have a lower carbon footprint than fossil fuels.

Artificial photosynthesis is a chemical process that biomimics the natural process of photosynthesis to convert sunlight, water, and carbon dioxide into carbohydrates and oxygen. The term artificial photosynthesis is commonly used to refer to any scheme for capturing and storing the energy from sunlight in the chemical bonds of a fuel. Photocatalytic water splitting converts water into hydrogen and oxygen and is a major research topic of artificial photosynthesis. Light-driven carbon dioxide reduction is another process studied that replicates natural carbon fixation.

<span class="mw-page-title-main">Isobutanol</span> Chemical compound

Isobutanol (IUPAC nomenclature: 2-methylpropan-1-ol) is an organic compound with the formula (CH3)2CHCH2OH (sometimes represented as i-BuOH). This colorless, flammable liquid with a characteristic smell is mainly used as a solvent either directly or as its esters. Its isomers are 1-butanol, 2-butanol, and tert-butanol, all of which are important industrially.

<span class="mw-page-title-main">Jay Keasling</span> American biologist

Jay D. Keasling is a professor of chemical engineering and bioengineering at the University of California, Berkeley. He is also associate laboratory director for biosciences at the Lawrence Berkeley National Laboratory and chief executive officer of the Joint BioEnergy Institute. He is considered one of the foremost authorities in synthetic biology, especially in the field of metabolic engineering.

<span class="mw-page-title-main">Lignocellulosic biomass</span> Plant dry matter

Lignocellulose refers to plant dry matter (biomass), so called lignocellulosic biomass. It is the most abundantly available raw material on the Earth for the production of biofuels. It is composed of two kinds of carbohydrate polymers, cellulose and hemicellulose, and an aromatic-rich polymer called lignin. Any biomass rich in cellulose, hemicelluloses, and lignin are commonly referred to as lignocellulosic biomass. Each component has a distinct chemical behavior. Being a composite of three very different components makes the processing of lignocellulose challenging. The evolved resistance to degradation or even separation is referred to as recalcitrance. Overcoming this recalcitrance to produce useful, high value products requires a combination of heat, chemicals, enzymes, and microorganisms. These carbohydrate-containing polymers contain different sugar monomers and they are covalently bound to lignin.

<span class="mw-page-title-main">Biohydrogen</span> Hydrogen that is produced biologically

Biohydrogen is H2 that is produced biologically. Interest is high in this technology because H2 is a clean fuel and can be readily produced from certain kinds of biomass, including biological waste. Furthermore some photosynthetic microorganisms are capable to produce H2 directly from water splitting using light as energy source.

<span class="mw-page-title-main">Butanol fuel</span> Fuel for internal combustion engines

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The non-mevalonate pathway—also appearing as the mevalonate-independent pathway and the 2-C-methyl-D-erythritol 4-phosphate/1-deoxy-D-xylulose 5-phosphate (MEP/DOXP) pathway—is an alternative metabolic pathway for the biosynthesis of the isoprenoid precursors isopentenyl pyrophosphate (IPP) and dimethylallyl pyrophosphate (DMAPP). The currently preferred name for this pathway is the MEP pathway, since MEP is the first committed metabolite on the route to IPP.

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<span class="mw-page-title-main">Algae fuel</span> Use of algae as a source of energy-rich oils

Algae fuel, algal biofuel, or algal oil is an alternative to liquid fossil fuels that uses algae as its source of energy-rich oils. Also, algae fuels are an alternative to commonly known biofuel sources, such as corn and sugarcane. When made from seaweed (macroalgae) it can be known as seaweed fuel or seaweed oil.

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<span class="mw-page-title-main">Microbial cell factory</span>

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References

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  3. "A New Way to Make Chemicals Not Found in Nature – Berkeley Lab". News Center. 2021-10-21. Retrieved 2023-02-06.
  4. Chubukov, Victor; Mukhopadhyay, Aindrila; Petzold, Christopher J.; Keasling, Jay D.; Martín, Héctor García (2016-04-07). "Synthetic and systems biology for microbial production of commodity chemicals". npj Systems Biology and Applications. 2 (1): 16009. doi:10.1038/npjsba.2016.9. ISSN   2056-7189. PMC   5516863 . PMID   28725470.
  5. akovner (2019-03-07). "Using Tiny Organisms to Unlock Big Environmental Mysteries". News Center. Retrieved 2023-02-06.
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  7. "ENIGMA". ENIGMA. Retrieved 2023-02-06.
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  9. Frederix, Marijke; Mingardon, Florence; Hu, Matthew; Sun, Ning; Pray, Todd; Singh, Seema; Simmons, Blake A.; Keasling, Jay D.; Mukhopadhyay, Aindrila (2016-07-21). "Development of an E. coli strain for one-pot biofuel production from ionic liquid pretreated cellulose and switchgrass". Green Chemistry. 18 (15): 4189–4197. doi: 10.1039/C6GC00642F . ISSN   1463-9270.
  10. 1 2 3 akovner (2019-06-21). "Blue Pigment from Engineered Fungi Could Help Turn the Textile Industry Green". News Center. Retrieved 2023-02-06.
  11. "Leadership". jbei.org. Retrieved 2023-02-06.
  12. "Mid-Career Award Winners". The Clean Energy Education & Empowerment (C3E) Initiative. Retrieved 2023-02-06.
  13. sharmon (2023-01-31). "Mukhopadhyay Named AAAS Fellow". Biosciences Area. Retrieved 2023-02-06.