Avibase

Last updated
Avibase
Type of site
Taxonomic database
Available in 105 languages
Created byDenis Lepage
URL avibase.bsc-eoc.org
Launched2003
Current statusActive

Avibase is an online taxonomic database that organizes bird taxonomic and distribution data globally. The database relies on the notion of taxonomic concepts [1] [2] rather than taxonomic names. [3] Avibase incorporates and organizes taxonomic data from the main avian taxonomic publishers ( The Clements Checklist of Birds of the World , [4] Handbook of the Birds of the World , BirdLife International, [5] IOC Checklist [6] and the Howard and Moore Complete Checklist of the Birds of the World [7] ) and other regional sources (e.g. all editions of the American Ornithological Society Checklist of North American Birds since 1886). Taxonomic concepts in over 230 different taxonomic sources have been mapped and cross-referenced to Avibase concepts.

Contents

The website also offers checklists for more than 20,000 geographic regions of the world, species pages with taxonomic information and synonyms, and tools for observers to maintain their own sightings and obtain reports, such as a map showing countries or eBird hotspots with target species.

History and purpose

Avibase was created and is maintained by Denis Lepage, currently senior director, data science and technology at Birds Canada. The data contained in Avibase has been gathered starting around 1991. [8] The Avibase website was launched in June 2003 and has been hosted by Birds Canada (formerly Bird Studies Canada) since its inception.

Features

Taxonomic concepts. The database is organized primarily around a table of unique taxonomic concepts. A taxonomic concept is a way of grouping similar taxa together in a database in a more flexible way as compared to specific species names. [9] [10] [11] Each concept represents a unique biological circumscription and has been assigned a unique alphanumeric ID called Avibase ID. Avibase IDs allow the tracking of congruent taxonomic concepts among publication sources. There are approximately 58,000 unique taxonomic concepts described in Avibase. These include concepts traditionally recognized as species and subspecies, but also other taxonomic groupings (subspecies groups), various alternative taxonomic treatments recognized historically, and other concepts representing hybrids, color morphs and invalid or dubious forms.

Nomenclature data. Each scientific name is described to include citation data and the name associated with the original description. Approximately 87,000 scientific names have been recorded in Avibase, and various types of synonyms are also available.

Regional species checklists are available for more than 20,000 regions of the world. This includes all countries, territories and dependencies, and most regions defined in the GADM subnational layers such as provinces, states, prefectures, counties, departments, municipalities and districts (GADM levels 1 and 2), as well as over 2,500 islands. Regional checklists are available in several taxonomic formats and can incorporate common names in a variety of languages. Data for regional checklists originates from multiple of sources, such as the eBird EBD dataset and forums such as the Facebook Global Rare Bird Alert.

Common names and synonyms are available in 271 different languages and regional variants, and there are 21 languages that have a coverage greater than 85% of species with a known common name.

MyAvibase, launched in 2013, provides free tools for users to maintain their life lists and generate reports that are focused on finding target species that the observer has not yet seen, or general regional statistics (e.g. total number of species by country).

Notes

  1. ↑ Berendsohn, Walter G. (1995). "The Concept of "Potential Taxa" in Databases". Taxon. 44 (2): 207–212. doi:10.2307/1222443. JSTOR   1222443.
  2. ↑ Kennedy, J.; Hyam, R.; Kukla, R.; Paterson, T. (2006). "Standard Data Model Representation for Taxonomic Information". OMICS: A Journal of Integrative Biology. 10 (2): 220–230. doi:10.1089/omi.2006.10.220. PMID   16901230.
  3. ↑ Lepage, Denis; Vaidya, Gaurav; Guralnick, Robert (2014). "Avibase – a database system for managing and organizing taxonomic concepts". ZooKeys (420): 117–135. Bibcode:2014ZooK..420..117L. doi: 10.3897/zookeys.420.7089 . PMC   4109484 . PMID   25061375.
  4. ↑ The eBird/Clements Checklist of Birds of the World: v2019 Clements, J. F., T. S. Schulenberg, M. J. Iliff, S. M. Billerman, T. A. Fredericks, B. L. Sullivan, and C. L. Wood. 2019.
  5. ↑ Handbook of the Birds of the World and BirdLife International digital checklist of the birds of the world. Version 4. HBW and BirdLife International (Dec. 2019)
  6. ↑ IOC World Bird List (v10.1) Gill F, D Donsker & P Rasmussen (Eds). 2020.
  7. ↑ The Howard and Moore Complete Checklist of the Birds of the World, version 4.1 (Downloadable checklist) Archived 2020-06-03 at the Wayback Machine Christidis et al. 2018.
  8. ↑ "Avibase - The World Bird Database". avibase.bsc-eoc.org.
  9. ↑ "Taxonomy for Humans or Computers? Cognitive Pragmatics for Big Data." Sterner, Beckett, and Nico M. Franz. 2017. Biological Theory 12 (2): 99–111.
  10. ↑ To Increase Trust, Change the Social Design behind Aggregated Biodiversity Data. Franz, Nico M., and Beckett W. Sterner. 2018. Database 2018 (January).
  11. ↑ "Controlling the Taxonomic Variable: Taxonomic Concept Resolution for a Southeastern United States Herbarium Portal." Franz, Nico, Edward Gilbert, Bertram Ludäscher, and Alan Weakley. 2016. Research Ideas and Outcomes 2 (September): e10610.

Related Research Articles

<span class="mw-page-title-main">Apatelodidae</span> Family of moths

Apatelodidae, the American silkworm moths, is a family of insects in the order Lepidoptera. They are a family within the superfamily Bombycoidea, though they have in the past been considered a subfamily of Bombycidae.

<span class="mw-page-title-main">ZooBank</span> International web registry for animal names

ZooBank is an open access website intended to be the official International Commission on Zoological Nomenclature (ICZN) registry of zoological nomenclature. Any nomenclatural acts published electronically need to be registered with ZooBank prior to publication to be "officially" recognized by the ICZN Code of Nomenclature. Acts published in physical publications are encouraged, but not required to be registered prior to their publication.

The lesser Chinese softshell turtle is a species of turtle in the family Trionychidae. It is endemic to China, where it inhabits a small range in Guangxi and Hunan provinces. Populations of this species in Vietnam and Hainan are now considered to belong to a separate species, the spotted softshell turtle.

<span class="mw-page-title-main">Polyxenida</span> Order of millipedes

Polyxenida is an order of millipedes readily distinguished by a unique body plan consisting of a soft, non-calcified body ornamented with tufts of bristles – traits that have inspired the common names "bristly millipedes" or "pincushion millipedes". There are at least 86 species in four families worldwide, and are the only living members of the subclass Penicillata.

Pensoft Publishers are a publisher of scientific literature based in Sofia, Bulgaria. Pensoft was founded in 1992, by two academics: Lyubomir Penev and Sergei Golovatch. It has published over 1000 academic and professional books and currently publishes over 60 peer-reviewed open access scientific journals including ZooKeys, PhytoKeys, Check List, Comparative Cytogenetics, Journal of Hymenoptera Research, Deutsche Entomologische Zeitschrift, and Zoosystematics and Evolution.

Aleodorus is a genus of rove beetles in the family Staphylinidae. There are at least four described species in Aleodorus.

Abagrotis hennei is a species of cutworm or dart moth in the family Noctuidae. It is found in North America.

Thesium is a genus of ant-loving beetles in the family Staphylinidae. There are at least two described species in Thesium.

<i>Abagrotis placida</i> Species of moth

Abagrotis placida, the red cutworm, is a species of cutworm or dart moth in the family Noctuidae. It is found in North America.

Abagrotis kirkwoodi is a species of cutworm or dart moth in the family Noctuidae. It is found in North America.

<i>Abagrotis mexicana</i> Species of moth

Abagrotis mexicana is a species of cutworm or dart moth in the family Noctuidae. It is found in Central America and North America.

<i>Abagrotis apposita</i> Species of moth

Abagrotis apposita is a species of cutworm or dart moth in the family Noctuidae. It is found in North America.

Metria bilineata is a species of moth in the family Erebidae.

<i>Toxonprucha volucris</i> Species of moth

Toxonprucha volucris, the bird toxonprucha, is a species of moth in the family Erebidae. It is found in North America.

<i>Abagrotis pulchrata</i> Species of moth

Abagrotis pulchrata is a species of cutworm or dart moth in the family Noctuidae. It is found in North America.

<i>Abagrotis denticulata</i> Species of moth

Abagrotis denticulata is a species of cutworm or dart moth in the family Noctuidae. It is found in North America.

<i>Abagrotis bimarginalis</i> Species of moth

Abagrotis bimarginalis is a species of cutworm or dart moth in the family Noctuidae. It is found in Central America and North America.

Anarta florida is a species of cutworm or dart moth in the family Noctuidae.

<i>Microgaster</i> Genus of wasps

Microgaster is a genus of braconid wasps in the family Braconidae. There are more than 100 described species in Microgaster, found throughout most of the world.

References

This page is based on this Wikipedia article
Text is available under the CC BY-SA 4.0 license; additional terms may apply.
Images, videos and audio are available under their respective licenses.