Complete Genomics

Last updated
Complete Genomics
Company type Private
Industry Biotechnology
Founded2006
Headquarters,
Area served
Worldwide
Parent MGI
Website www.completegenomics.com OOjs UI icon edit-ltr-progressive.svg

Complete Genomics is a life sciences company that has developed and commercialized a DNA sequencing platform for human genome sequencing and analysis. The company is a wholly-owned subsidiary of MGI.

Contents

History

Complete Genomics was founded in June 2005 by Clifford Reid, Radoje (Rade) Drmanac, and John Curson. Clifford Reid was the chairman, president and chief executive officer of Complete Genomics before leaving in 2015 to set up Genos, a spinoff of Complete Genomics' consumer division. [1] [2]

In February 2009, Complete Genomics announced that it had sequenced its first human genome and submitted the resulting variant data to the National Center for Biotechnology Information database. In November 2009, Complete Genomics published sequence data for three human genomes in the journal Science . [3]

The resulting data has supported research in diverse areas such as screening of embryos, [4] detection of genetic relationships, [5] [6] neurology, [7] aging, [8] a novel Mendelian disease with neuromuscular and cardiac involvement, [9] eating disorders, [10] Prader-Willi syndrome and autism, [11] ophthalmology, [12] and oncology. [13] [14] [15] [16] [17] In 2014, a collaboration among Radboud University (The Netherlands), Maastricht University Medical Centre (The Netherlands), Central South University (China) and Complete Genomics identified major causes of intellectual disability using whole genome sequencing. [18]

In 2016, Complete Genomics contributed over 184 phased human genomes to George Church's Personal Genome Project. [19] In 2019, they published their new single-tube long fragment read (stLFR) technology, enabling the construction of long DNA molecules from short reads using a combinatorial process of DNA barcoding. It enables phasing, SV detection, scaffolding, and cost-effective diploid de novo genome assembly from second-generation sequencing technology. [20]

In March 2013, Complete Genomics was acquired by BGI Group, a genomics services company in Shenzhen, Guangdong, China. [21] After the acquisition, Complete Genomics moved to San Jose and in June 2018 became part of MGI. [22] MGI was a subsidiary of BGI Group before it was spun out and listed on the Shanghai Stock Exchange in 2022. [23]

References

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  2. "Complete Genomics Announces Updated Mission and New Partnerships on 18th Anniversary". News-Medical. 15 June 2023. Archived from the original on 2023-07-11. Retrieved 2023-06-15.
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  9. Wang K; et al. (2013). "Whole-genome DNA/RNA sequencing identifies truncating mutations in RBCK1 in a novel Mendelian disease with neuromuscular and cardiac involvement". Genome Medicine. 5 (7): 67. doi: 10.1186/gm471 . PMC   3971341 . PMID   23889995.
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  11. Schaaf CP; et al. (2013). "Truncating mutations of MAGEL2 cause Prader-Willi phenotypes and autism". Nature Genetics. 45 (11): 1405–1408. doi:10.1038/ng.2776. PMC   3819162 . PMID   24076603.
  12. Nishiguchi KM; et al. (2012). "Genes associated with retinitis pigmentosa and allied diseases are frequently mutated in the general population". PLOS ONE. 7 (7): e41902. Bibcode:2012PLoSO...741902N. doi: 10.1371/journal.pone.0041902 . PMC   3407128 . PMID   22848652.
  13. Ma Y; et al. (2012). "Developmental timing of mutations revealed by whole-genome sequencing of twins with acute lymphoblastic leukemia". Proc Natl Acad Sci USA. 110 (18): 7429–7433. Bibcode:2013PNAS..110.7429M. doi: 10.1073/pnas.1221099110 . PMC   3645544 . PMID   23569245.
  14. Kiel MJ; et al. (2012). "Whole-genome sequencing identifies recurrent somatic NOTCH2 mutations in splenic marginal zone lymphoma". The Journal of Experimental Medicine. 209 (9): 1553–1565. doi:10.1084/jem.20120910. PMC   3428949 . PMID   22891276.
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  16. Turajlic S; et al. (2011). "Whole genome sequencing of matched primary and metastatic acral melanomas". Genome Res. 22 (2): 196–207. doi:10.1101/gr.125591.111. PMC   3266028 . PMID   22183965.
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  19. Peters, Brock A.; Drmanac, Radoje; Church, George M.; Estep, Preston W.; Zaranek, Alexander Wait; Vandewege, Ward; Connelly, Abram; Clegg, Tom; Agarwal, Misha R. (2016-12-01). "The whole genome sequences and experimentally phased haplotypes of over 100 personal genomes". GigaScience. 5 (1): 42. doi: 10.1186/s13742-016-0148-z . PMC   5057367 . PMID   27724973.
  20. Peters, Brock A.; Drmanac, Radoje; Xu, Xun; Kristiansen, Karsten; Wang, Jian; Yang, Huanming; Alexeev, Andrei; Zhang, Wenwei; Dong, Yuliang (2019-05-01). "Efficient and unique cobarcoding of second-generation sequencing reads from long DNA molecules enabling cost-effective and accurate sequencing, haplotyping, and de novo assembly". Genome Research. 29 (5): 798–808. doi:10.1101/gr.245126.118. ISSN   1088-9051. PMC   6499310 . PMID   30940689.
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  22. brandonvd. "About Us". Complete Genomics. Retrieved 2019-06-15.
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