Cytogenetic notation

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The following table summarizes symbols and abbreviations used in cytogenetics: [1] [2]

SymbolDescription
,Separates modal number (total number of chromosomes), sex chromosomes, and chromosome abnormalities
-Loss of a chromosome
( )Grouping for breakpoints and structurally altered chromosomes
+Gain of a chromosome
 ;Separates rearranged chromosomes and breakpoints involving more than one chromosome
/Separates cell lines or clones
//Separates recipient and donor cell lines in bone marrow transplants
delDeletion
der Derivative chromosome
dic Dicentric chromosome
dimdiminished signal intensity
dnde novo (not inherited) chromosomal abnormality
dup Duplication of a portion of a chromosome
enhenhanced signal intensity
fraFragile site (usually used with fragile X syndrome)
h Heterochromatic region of chromosome
i Isochromosome
idicIsodicentric chromosome (duplication & inversion of centromere-containing segment)
ins Insertion
inv Inversion
.ishPrecedes karyotype results from FISH analysis
mar Marker chromosome
matMaternally-derived chromosome rearrangement
pShort arm of a chromosome
patPaternally-derived chromosome rearrangement
psu dicpseudo dicentric – only one centromere in a dicentric chromosome is active
qLong arm of a chromosome
rRing chromosome
t Translocation
terTerminal end of arm (e.g. 2qter refers to the end of the long arm of chromosome 2)
tri Trisomy
trpTriplication of a portion of a chromosome

See also

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References

  1. "Cytogenetics Basics | Wisconsin State Laboratory of Hygiene".
  2. "ISCN rules for listing chromosomal rearrangements". Current Protocols in Human Genetics. Appendix 4: Appendix 4C. May 2001. doi:10.1002/0471142905.hga04cs17. ISBN   978-0471142904. ISSN   1934-8258. PMID   18428230. S2CID   46677230.