DMAP1

DMAP1
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 3HM5, 4IEJ
Identifiers
Aliases	DMAP1 , DNMAP1, DNMTAP1, EAF2, MEAF2, SWC4, DNA methyltransferase 1 associated protein 1
External IDs	OMIM: 605077; MGI: 1913483; HomoloGene: 41311; GeneCards: DMAP1; OMA:DMAP1 - orthologs
Gene location (Human) Chr. Chromosome 1 (human) [1] Band 1p34.1 Start 44,213,455 bp [1] End 44,220,681 bp [1]
Gene location (Mouse) Chr. Chromosome 4 (mouse) [2] Band 4|4 D1 Start 117,531,878 bp [2] End 117,539,470 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in right adrenal cortex left adrenal cortex right uterine tube granulocyte right hemisphere of cerebellum Brodmann area 9 right frontal lobe anterior pituitary right lobe of thyroid gland mucosa of transverse colon Top expressed in superior surface of tongue gallbladder extensor digitorum longus muscle spermatocyte plantaris muscle cardiac muscle tissue of left ventricle primary oocyte seminiferous tubule corneal stroma spermatid More reference expression data BioGPS n/a
Gene ontology Molecular function protein binding transcription corepressor activity DNA-binding transcription factor activity, RNA polymerase II-specific DNA binding Cellular component replication fork cytoplasm NuA4 histone acetyltransferase complex nucleus nucleoplasm cytosol Biological process chromatin remodeling regulation of transcription, DNA-templated negative regulation of transcription by RNA polymerase II transcription, DNA-templated DNA methylation regulation of growth response to ethanol DNA repair negative regulation of transcription, DNA-templated histone H4 acetylation histone H2A acetylation chromatin organization positive regulation of protein import into nucleus Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 55929 66233 Ensembl ENSG00000178028 ENSMUSG00000009640 UniProt Q9NPF5 Q5TG37 Q9JI44 RefSeq (mRNA) NM_001034023 NM_001034024 NM_019100 NM_023178 RefSeq (protein) NP_001029195 NP_001029196 NP_061973 NP_075667 Location (UCSC) Chr 1: 44.21 – 44.22 Mb Chr 4: 117.53 – 117.54 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

DNA methyltransferase 1-associated protein 1 is an enzyme that in humans is encoded by the DMAP1 gene. ^{[5] [6] [7]}

Function

This gene encodes a subunit of several, distinct complexes involved in the repression or activation of transcription. The encoded protein can independently repress transcription and is targeted to replication foci throughout S phase by interacting directly with the N-terminus of DNA methyltransferase 1. During late S phase, histone deacetylase 2 is added to this complex, providing a means to deacetylate histones in transcriptionally inactive heterochromatin following replication. The encoded protein is also a component of the nucleosome acetyltransferase of H4 complex and interacts with the transcriptional corepressor tumor susceptibility gene 101 and the pro-apoptotic death-associated protein 6, among others. Alternatively spliced transcript variants encoding the same protein have been described. ^[7]

Interactions

DMAP1 has been shown to interact with:

• C19orf2, ^[8]
• DNMT1, ^[9]
• ING1, ^[10] and
• RGS6 ^[11]

References

1. GRCh38: Ensembl release 89: ENSG00000178028 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000009640 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Rountree MR, Bachman KE, Baylin SB (Aug 2000). "DNMT1 binds HDAC2 and a new co-repressor, DMAP1, to form a complex at replication foci". Nat Genet. 25 (3): 269–77. doi:10.1038/77023. PMID   10888872. S2CID   26149386.
6. Nagase T, Kikuno R, Ishikawa KI, Hirosawa M, Ohara O (Apr 2000). "Prediction of the coding sequences of unidentified human genes. XVI. The complete sequences of 150 new cDNA clones from brain which code for large proteins in vitro". DNA Res. 7 (1): 65–73. doi: 10.1093/dnares/7.1.65 . PMID   10718198.
7. "Entrez Gene: DMAP1 DNA methyltransferase 1 associated protein 1".
8. Delgermaa L, Hayashi N, Dorjsuren D, Nomura T, Thuy le TT, Murakami S (Oct 2004). "Subcellular localization of RPB5-mediating protein and its putative functional partner". Mol. Cell. Biol. 24 (19): 8556–66. doi:10.1128/MCB.24.19.8556-8566.2004. PMC   516735 . PMID   15367675.
9. Rountree MR, Bachman KE, Baylin SB (Jul 2000). "DNMT1 binds HDAC2 and a new co-repressor, DMAP1, to form a complex at replication foci". Nat. Genet. 25 (3): 269–77. doi:10.1038/77023. PMID   10888872. S2CID   26149386.
10. Xin H, Yoon HG, Singh PB, Wong J, Qin J (Mar 2004). "Components of a pathway maintaining histone modification and heterochromatin protein 1 binding at the pericentric heterochromatin in Mammalian cells". J. Biol. Chem. 279 (10): 9539–46. doi: 10.1074/jbc.M311587200 . PMID   14665632.
11. Liu Z, Fisher RA (Apr 2004). "RGS6 interacts with DMAP1 and DNMT1 and inhibits DMAP1 transcriptional repressor activity". J. Biol. Chem. 279 (14): 14120–8. doi: 10.1074/jbc.M309547200 . PMID   14734556.

Further reading

• Doyon Y, Côté J (2004). "The highly conserved and multifunctional NuA4 HAT complex". Curr. Opin. Genet. Dev. 14 (2): 147–54. doi:10.1016/j.gde.2004.02.009. PMID   15196461.
• Hartley JL, Temple GF, Brasch MA (2001). "DNA cloning using in vitro site-specific recombination". Genome Res. 10 (11): 1788–95. doi:10.1101/gr.143000. PMC   310948 . PMID   11076863.
• Wiemann S, Weil B, Wellenreuther R, et al. (2001). "Toward a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs". Genome Res. 11 (3): 422–35. doi:10.1101/gr.GR1547R. PMC   311072 . PMID   11230166.
• Yang CS, Weiner H (2002). "Yeast two-hybrid screening identifies binding partners of human Tom34 that have ATPase activity and form a complex with Tom34 in the cytosol". Arch. Biochem. Biophys. 400 (1): 105–10. doi:10.1006/abbi.2002.2778. PMID   11913976.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi: 10.1073/pnas.242603899 . PMC   139241 . PMID   12477932.
• Cai Y, Jin J, Tomomori-Sato C, et al. (2003). "Identification of new subunits of the multiprotein mammalian TRRAP/TIP60-containing histone acetyltransferase complex". J. Biol. Chem. 278 (44): 42733–6. doi: 10.1074/jbc.C300389200 . PMID   12963728.
• Xin H, Yoon HG, Singh PB, et al. (2004). "Components of a pathway maintaining histone modification and heterochromatin protein 1 binding at the pericentric heterochromatin in Mammalian cells". J. Biol. Chem. 279 (10): 9539–46. doi: 10.1074/jbc.M311587200 . PMID   14665632.
• Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi: 10.1038/ng1285 . PMID   14702039.
• Liu Z, Fisher RA (2004). "RGS6 interacts with DMAP1 and DNMT1 and inhibits DMAP1 transcriptional repressor activity". J. Biol. Chem. 279 (14): 14120–8. doi: 10.1074/jbc.M309547200 . PMID   14734556.
• Doyon Y, Selleck W, Lane WS, et al. (2004). "Structural and functional conservation of the NuA4 histone acetyltransferase complex from yeast to humans". Mol. Cell. Biol. 24 (5): 1884–96. doi:10.1128/MCB.24.5.1884-1896.2004. PMC   350560 . PMID   14966270.
• Muromoto R, Sugiyama K, Takachi A, et al. (2004). "Physical and functional interactions between Daxx and DNA methyltransferase 1-associated protein, DMAP1". J. Immunol. 172 (5): 2985–93. doi: 10.4049/jimmunol.172.5.2985 . PMID   14978102.
• Muromoto R, Sugiyama K, Yamamoto T, et al. (2004). "Physical and functional interactions between Daxx and TSG101". Biochem. Biophys. Res. Commun. 316 (3): 827–33. doi:10.1016/j.bbrc.2004.02.126. hdl: 2115/28120 . PMID   15033475.
• Ballif BA, Villén J, Beausoleil SA, et al. (2005). "Phosphoproteomic analysis of the developing mouse brain". Mol. Cell. Proteomics. 3 (11): 1093–101. doi: 10.1074/mcp.M400085-MCP200 . PMID   15345747.
• Delgermaa L, Hayashi N, Dorjsuren D, et al. (2004). "Subcellular localization of RPB5-mediating protein and its putative functional partner". Mol. Cell. Biol. 24 (19): 8556–66. doi:10.1128/MCB.24.19.8556-8566.2004. PMC   516735 . PMID   15367675.
• Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC   528928 . PMID   15489334.
• Wiemann S, Arlt D, Huber W, et al. (2004). "From ORFeome to biology: a functional genomics pipeline". Genome Res. 14 (10B): 2136–44. doi:10.1101/gr.2576704. PMC   528930 . PMID   15489336.
• Cai Y, Jin J, Florens L, et al. (2005). "The mammalian YL1 protein is a shared subunit of the TRRAP/TIP60 histone acetyltransferase and SRCAP complexes". J. Biol. Chem. 280 (14): 13665–70. doi: 10.1074/jbc.M500001200 . PMID   15647280.