DPH5

DPH5
Identifiers
Aliases	DPH5 , CGI-30, HSPC143, NPD015, AD-018, diphthamide biosynthesis 5
External IDs	OMIM: 611075 MGI: 1916990 HomoloGene: 6471 GeneCards: DPH5
Gene location (Human) Chr. Chromosome 1 (human) [1] Band 1p21.2 Start 100,989,623 bp [1] End 101,026,088 bp [1]
Gene location (Mouse) Chr. Chromosome 3 (mouse) [2] Band 3|3 G1 Start 115,887,837 bp [2] End 115,934,361 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in body of pancreas Right adrenal gland ganglionic eminence tibialis anterior muscle Left adrenal gland myocardium islet of Langerhans stromal cell of endometrium mucosa of urinary bladder deltoid muscle Top expressed in Paneth cell yolk sac primitive streak motor neuron fossa blastocyst condyle morula facial motor nucleus substantia nigra More reference expression data BioGPS More reference expression data
Gene ontology Molecular function methyltransferase activity transferase activity diphthine synthase activity Cellular component cytosol cellular component Biological process methylation metabolism peptidyl-diphthamide biosynthetic process from peptidyl-histidine Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 51611 69740 Ensembl ENSG00000117543 ENSMUSG00000033554 UniProt Q9H2P9 Q9CWQ0 RefSeq (mRNA) NM_001077394 NM_001077395 NM_015958 NM_027193 RefSeq (protein) NP_001070862 NP_001070863 NP_057042 NP_081469 Location (UCSC) Chr 1: 100.99 – 101.03 Mb Chr 3: 115.89 – 115.93 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Diphthine synthase is an enzyme that in humans is encoded by the DPH5 gene. ^{[5] [6]}

This gene encodes a component of the diphthamide synthesis pathway. Diphthamide is a post-translationally modified histidine residue found only on translation elongation factor 2. It is conserved from archaebacteria to humans, and is targeted by diphtheria toxin and Pseudomonas exotoxin A to halt cellular protein synthesis.

The yeast and Chinese hamster homologs of this protein catalyze the trimethylation of the histidine residue on elongation factor 2, resulting in a diphthine moiety that is subsequently amidated to yield diphthamide. Multiple transcript variants encoding different isoforms have been found for this gene. ^[6]

References

1. GRCh38: Ensembl release 89: ENSG00000117543 - Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000033554 - Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Liu S, Milne GT, Kuremsky JG, Fink GR, Leppla SH (Oct 2004). "Identification of the proteins required for biosynthesis of diphthamide, the target of bacterial ADP-ribosylating toxins on translation elongation factor 2". Mol Cell Biol. 24 (21): 9487–97. doi:10.1128/MCB.24.21.9487-9497.2004. PMC   522255 . PMID   15485916.
6. "Entrez Gene: DPH5 DPH5 homolog (S. cerevisiae)".

Further reading

• Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–4. doi:10.1016/0378-1119(94)90802-8. PMID   8125298.
• Bonaldo MF, Lennon G, Soares MB (1997). "Normalization and subtraction: two approaches to facilitate gene discovery". Genome Res. 6 (9): 791–806. doi: 10.1101/gr.6.9.791 . PMID   8889548.
• Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, et al. (1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–56. doi:10.1016/S0378-1119(97)00411-3. PMID   9373149.
• Dias Neto E, Correa RG, Verjovski-Almeida S, et al. (2000). "Shotgun sequencing of the human transcriptome with ORF expressed sequence tags". Proc. Natl. Acad. Sci. U.S.A. 97 (7): 3491–6. Bibcode:2000PNAS...97.3491D. doi: 10.1073/pnas.97.7.3491 . PMC   16267 . PMID   10737800.
• Lai CH, Chou CY, Ch'ang LY, et al. (2000). "Identification of novel human genes evolutionarily conserved in Caenorhabditis elegans by comparative proteomics". Genome Res. 10 (5): 703–13. doi:10.1101/gr.10.5.703. PMC   310876 . PMID   10810093.
• Hu RM, Han ZG, Song HD, et al. (2000). "Gene expression profiling in the human hypothalamus-pituitary-adrenal axis and full-length cDNA cloning". Proc. Natl. Acad. Sci. U.S.A. 97 (17): 9543–8. Bibcode:2000PNAS...97.9543H. doi: 10.1073/pnas.160270997 . PMC   16901 . PMID   10931946.
• Zhang QH, Ye M, Wu XY, et al. (2001). "Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells". Genome Res. 10 (10): 1546–60. doi:10.1101/gr.140200. PMC   310934 . PMID   11042152.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi: 10.1073/pnas.242603899 . PMC   139241 . PMID   12477932.
• Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC   528928 . PMID   15489334.
• Kimura K, Wakamatsu A, Suzuki Y, et al. (2006). "Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes". Genome Res. 16 (1): 55–65. doi:10.1101/gr.4039406. PMC   1356129 . PMID   16344560.