Dinodnavirus

Last updated
Dinodnavirus
Virus classification Red Pencil Icon.png
(unranked): Virus
Realm: incertae sedis
Kingdom: incertae sedis
Phylum: incertae sedis
Class: incertae sedis
Order: incertae sedis
Family: incertae sedis
Genus:Dinodnavirus
Species

Heterocapsa circularisquama DNA virus 01

Dinodnavirus is a genus of viruses that infect dinoflagellates. [1] This genus belongs to the clade of nucleocytoplasmic large DNA viruses. The name is derived from 'dino' (dinoflagellate) and DNA (from its genome).

Contents

The only species in the genus is Heterocapsa circularisquama DNA virus 01. [2]

Virology

The virus has an icosahedral capsid ~200 nanometers in diameter.[ citation needed ]

The genome is a single molecule of double stranded DNA of a ~356-kilobases.[ citation needed ]

It infects the dinoflagellate Heterocapsa circularisquama .

During replication virions emerge from a specific cytoplasm compartment – the 'viroplasm' – which is created by the virus. [3]

Taxonomy

The sole species was originally thought to belong to the family Phycodnaviridae . DNA studies have shown that it belongs in the family Asfarviridae . [4] [5]

Related Research Articles

<i>Hepadnaviridae</i> Family of viruses

Hepadnaviridae is a family of viruses. Humans, apes, and birds serve as natural hosts. There are currently 18 species in this family, divided among 5 genera. Its best-known member is hepatitis B virus. Diseases associated with this family include: liver infections, such as hepatitis, hepatocellular carcinomas, and cirrhosis. It is the sole accepted family in the order Blubervirales.

<i>Bunyavirales</i> Order of RNA viruses

Bunyavirales is an order of segmented negative-strand RNA viruses with mainly tripartite genomes. Member viruses infect arthropods, plants, protozoans, and vertebrates. It is the only order in the class Ellioviricetes. The name Bunyavirales derives from Bunyamwera, where the original type species Bunyamwera orthobunyavirus was first discovered. Ellioviricetes is named in honor of late virologist Richard M. Elliott for his early work on bunyaviruses.

<i>Poxviridae</i> Family of viruses

Poxviridae is a family of double-stranded DNA viruses. Vertebrates and arthropods serve as natural hosts. There are currently 83 species in this family, divided among 22 genera, which are divided into two subfamilies. Diseases associated with this family include smallpox.

Microviridae is a family of bacteriophages with a single-stranded DNA genome. The name of this family is derived from the ancient Greek word μικρός (mikrós), meaning "small". This refers to the size of their genomes, which are among the smallest of the DNA viruses. Enterobacteria, intracellular parasitic bacteria, and spiroplasma serve as natural hosts. There are 22 species in this family, divided among seven genera and two subfamilies.

<i>Herpesviridae</i> Family of DNA viruses

Herpesviridae is a large family of DNA viruses that cause infections and certain diseases in animals, including humans. The members of this family are also known as herpesviruses. The family name is derived from the Greek word ἕρπειν, referring to spreading cutaneous lesions, usually involving blisters, seen in flares of herpes simplex 1, herpes simplex 2 and herpes zoster (shingles). In 1971, the International Committee on the Taxonomy of Viruses (ICTV) established Herpesvirus as a genus with 23 viruses among four groups. As of 2020, 115 species are recognized, all but one of which are in one of the three subfamilies. Herpesviruses can cause both latent and lytic infections.

<i>Coccolithovirus</i> Genus of viruses

Coccolithovirus is a genus of giant double-stranded DNA virus, in the family Phycodnaviridae. Algae, specifically Emiliania huxleyi, a species of coccolithophore, serve as natural hosts. There is only one described species in this genus: Emiliania huxleyi virus 86.

Phycodnaviridae is a family of large (100–560 kb) double-stranded DNA viruses that infect marine or freshwater eukaryotic algae. Viruses within this family have a similar morphology, with an icosahedral capsid. As of 2014, there were 33 species in this family, divided among 6 genera. This family belongs to a super-group of large viruses known as nucleocytoplasmic large DNA viruses. Evidence was published in 2014 suggesting that specific strains of Phycodnaviridae might infect humans rather than just algal species, as was previously believed. Most genera under this family enter the host cell by cell receptor endocytosis and replicate in the nucleus. Phycodnaviridae play important ecological roles by regulating the growth and productivity of their algal hosts. Algal species such Heterosigma akashiwo and the genus Chrysochromulina can form dense blooms which can be damaging to fisheries, resulting in losses in the aquaculture industry. Heterosigma akashiwo virus (HaV) has been suggested for use as a microbial agent to prevent the recurrence of toxic red tides produced by this algal species. Phycodnaviridae cause death and lysis of freshwater and marine algal species, liberating organic carbon, nitrogen and phosphorus into the water, providing nutrients for the microbial loop.

<i>Asfarviridae</i> Family of viruses

Asfarviridae is a family of viruses, the best-studied of which is African swine fever virus. They are double-stranded DNA viruses.

<i>Lipothrixviridae</i> Family of viruses

Lipothrixviridae is a family of viruses in the order Ligamenvirales. Thermophilic archaea in the phylum Thermoproteota serve as natural hosts. There are 11 species in this family, assigned to 4 genera. The genus

<i>Ascoviridae</i> Family of viruses

Ascoviridae is a family of double strand DNA viruses that infect primarily invertebrates, mainly noctuids and spodoptera species; it contains two genera, Ascovirus, which contains three species, and Toursvirus with a single species Diadromus pulchellus toursvirus.

<i>Halspiviridae</i> Family of viruses

Halspiviridae is a family of viruses that consists of a single genus, Salterprovirus, which consists of a single recognised species; Salterprovirus His1. This virus was isolated from hypersaline water in Australia and was able to be cultured on the halophilic archaeon Haloarcula hispanica. Like many other archaeoviruses, His1 has an approximately limoniform (lemon-shaped) virion.

<i>Rhizidiovirus</i> Genus of viruses

Rhizidiovirus is a genus of viruses. Stramenopiles serve as natural hosts. There is only one species in this genus: Rhizidiomyces virus.

Enquatrovirus is a genus of bacteriophages in the order Caudovirales, in the family Podoviridae. Bacteria serve as natural hosts. There is currently only one species in this genus: the type species Escherichia virus N4.

A giant virus, sometimes referred to as a girus, is a very large virus, some of which are larger than typical bacteria. All known giant viruses belong to the phylum Nucleocytoviricota.

Yingchengvirus is a genus of double stranded DNA viruses that infect haloarchaea. The genus was previously named Betasphaerolipovirus.

Heterocapsa circularisquama is a species of dinoflagellates notable for the production of a biotoxin affecting marine fauna. It is known to produce large red tides off western Japan, causing high bivalve mortality, particularly pearl oysters. It is very similar to Heterocapsa illdefina, however H. circularisquama carries six radiating ridges on its circular basal plate, and its scales have longer spines, among other subtle differences in morphology.

<i>Alvernaviridae</i> Family of viruses

Alvernaviridae is a family of non-enveloped positive-strand RNA viruses. Dinoflagellates serve as natural hosts. There is one genus in this family, Dinornavirus, which contains one species: Heterocapsa circularisquama RNA virus 01. Diseases associated with this family include host population control, possibly through lysis of the host cell.

<i>Genomoviridae</i> Family of viruses

Genomoviridae is a family of single stranded DNA viruses that mainly infect fungi. The genomes of this family are small. The genomes are circular single-stranded DNA and encode rolling-circle replication initiation proteins (Rep) and unique capsid proteins. In Rep-based phylogenies, genomoviruses form a sister clade to plant viruses of the family Geminiviridae. Ten genera are recognized in this family.

Nucleocytoviricota is a phylum of viruses. Members of the phylum are also known as the nucleocytoplasmic large DNA viruses (NCLDV), which serves as the basis of the name of the phylum with the suffix -viricota for virus phylum. These viruses are referred to as nucleocytoplasmic because they are often able to replicate in both the host's cell nucleus and cytoplasm.

<i>Bacilladnaviridae</i> Family of viruses

Bacilladnaviridae is a family of single-stranded DNA viruses that primarily infect diatoms.

References

  1. Tarutani K, Nagasaki K, Itakura S, Yamaguchi M (2001) Isolation of a virus infecting the novel shellfish-killing dinoflagellate Heterocapsa circularisquama. Aquat Microb Ecol 23:103–111
  2. "Virus Taxonomy: 2020 Release". International Committee on Taxonomy of Viruses (ICTV). March 2021. Retrieved 24 May 2021.
  3. Nagasaki K, Tomaru Y, Tarutani K, Katanozaka N, Yamanaka S, Tanabe H, Yamaguchi M (2003) Growth characteristics and intraspecies host specificity of a large virus infecting the dinoflagellate Heterocapsa circularisquama. Appl Environ Microbiol 69:2580–2586
  4. Ogata H, Toyoda K, Tomaru Y, Nakayama N, Shirai Y, Claverie JM, Nagasaki K (2009) Remarkable sequence similarity between the dinoflagellate-infecting marine girus and the terrestrial pathogen African swine fever virus. Virol J 6:178
  5. Karki, Sangita; Moniruzzaman, Mohammad; Aylward, Frank O. (2021). "Comparative Genomics and Environmental Distribution of Large dsDNA Viruses in the Family Asfarviridae". Frontiers in Microbiology. 12: 657471. doi: 10.3389/fmicb.2021.657471 . PMC   8005611 . PMID   33790885.