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An endosymbiont or endobiont is any organism that lives within the body or cells of another organism most often, though not always, in a mutualistic relationship. (The term endosymbiosis is from the Greek: ἔνδον endon "within", σύν syn "together" and βίωσις biosis "living".) Examples are nitrogen-fixing bacteria, which live in the root nodules of legumes, single-cell algae inside reef-building corals and bacterial endosymbionts that provide essential nutrients to insects.
Corals are marine invertebrates within the class Anthozoa of the phylum Cnidaria. They typically form compact colonies of many identical individual polyps. Coral species include the important reef builders that inhabit tropical oceans and secrete calcium carbonate to form a hard skeleton.
A coral reef is an underwater ecosystem characterized by reef-building corals. Reefs are formed of colonies of coral polyps held together by calcium carbonate. Most coral reefs are built from stony corals, whose polyps cluster in groups.
Coral bleaching is the process when corals become white due to various stressors, such as changes in temperature, light, or nutrients. Bleaching occurs when coral polyps expel the zooxanthellae that live inside their tissue, causing the coral to turn white. The zooxanthellae are photosynthetic, and as the water temperature rises, they begin to produce reactive oxygen species. This is toxic to the coral, so the coral expels the zooxanthellae. Since the zooxanthellae produce the majority of coral colouration, the coral tissue becomes transparent, revealing the coral skeleton made of calcium carbonate. Most bleached corals appear bright white, but some are blue, yellow, or pink due to pigment proteins in the coral.
Zooxanthellae is a colloquial term for single-celled dinoflagellates that are able to live in symbiosis with diverse marine invertebrates including demosponges, corals, jellyfish, and nudibranchs. Most known zooxanthellae are in the genus Symbiodinium, but some are known from the genus Amphidinium, and other taxa, as yet unidentified, may have similar endosymbiont affinities. The true Zooxanthella K.brandt is a mutualist of the radiolarian Collozoum inerme and systematically placed in Peridiniales. Another group of unicellular eukaryotes that partake in similar endosymbiotic relationships in both marine and freshwater habitats are green algae zoochlorellae.
Symbiotic bacteria are bacteria living in symbiosis with another organism or each other. For example, rhizobia living in root nodules of legumes provide nitrogen fixing activity for these plants.
Symbiodinium is a genus of dinoflagellates that encompasses the largest and most prevalent group of endosymbiotic dinoflagellates known. These unicellular microalgae commonly reside in the endoderm of tropical cnidarians such as corals, sea anemones, and jellyfish, where the products of their photosynthetic processing are exchanged in the host for inorganic molecules. They are also harbored by various species of demosponges, flatworms, mollusks such as the giant clams, foraminifera (soritids), and some ciliates. Generally, these dinoflagellates enter the host cell through phagocytosis, persist as intracellular symbionts, reproduce, and disperse to the environment. The exception is in most mollusks, where these symbionts are intercellular. Cnidarians that are associated with Symbiodinium occur mostly in warm oligotrophic (nutrient-poor), marine environments where they are often the dominant constituents of benthic communities. These dinoflagellates are therefore among the most abundant eukaryotic microbes found in coral reef ecosystems.
The resilience of coral reefs is the biological ability of coral reefs to recover from natural and anthropogenic disturbances such as storms and bleaching episodes. Resilience refers to the ability of biological or social systems to overcome pressures and stresses by maintaining key functions through resisting or adapting to change. Reef resistance measures how well coral reefs tolerate changes in ocean chemistry, sea level, and sea surface temperature. Reef resistance and resilience are important factors in coral reef recovery from the effects of ocean acidification. Natural reef resilience can be used as a recovery model for coral reefs and an opportunity for management in marine protected areas (MPAs).
The hologenome theory of evolution recasts the individual animal or plant as a community or a "holobiont" – the host plus all of its symbiotic microbes. Consequently, the collective genomes of the holobiont form a "hologenome". Holobionts and hologenomes are structural entities that replace misnomers in the context of host-microbiota symbioses such as superorganism, organ, and metagenome. Variation in the hologenome may encode phenotypic plasticity of the holobiont and can be subject to evolutionary changes caused by selection and drift, if portions of the hologenome are transmitted between generations with reasonable fidelity. One of the important outcomes of recasting the individual as a holobiont subject to evolutionary forces is that genetic variation in the hologenome can be brought about by changes in the host genome and also by changes in the microbiome, including new acquisitions of microbes, horizontal gene transfers, and changes in microbial abundance within hosts. Although there is a rich literature on binary host–microbe symbioses, the hologenome concept distinguishes itself by including the vast symbiotic complexity inherent in many multicellular hosts. For recent literature on holobionts and hologenomes published in an open access platform, see the following reference.
Pocillopora damicornis, commonly known as the cauliflower coral or lace coral, is a species of stony coral in the family Pocilloporidae. It is native to tropical and subtropical parts of the Indian and Pacific Oceans.
Durusdinium trenchii is an endosymbiotic dinoflagellate, a unicellular alga which commonly resides in the tissues of tropical corals. It has a greater tolerance to fluctuations in water temperatures than do other species in the genus. It was named for the marine biologist R. K. Trench.
Microbial symbiosis in marine animals was not discovered until 1981. In the time following, symbiotic relationships between marine invertebrates and chemoautotrophic bacteria have been found in a variety of ecosystems, ranging from shallow coastal waters to deep-sea hydrothermal vents. Symbiosis is a way for marine organisms to find creative ways to survive in a very dynamic environment. They are different in relation to how dependent the organisms are on each other or how they are associated. It is also considered a selective force behind evolution in some scientific aspects. The symbiotic relationships of organisms has the ability to change behavior, morphology and metabolic pathways. With increased recognition and research, new terminology also arises, such as holobiont, which the relationship between a host and its symbionts as one grouping. Many scientists will look at the hologenome, which is the combined genetic information of the host and its symbionts. These terms are more commonly used to describe microbial symbionts.
A holobiont is an assemblage of a host and the many other species living in or around it, which together form a discrete ecological unit through symbiosis, though there is controversy over this discreteness. The components of a holobiont are individual species or bionts, while the combined genome of all bionts is the hologenome. The holobiont concept was initially introduced by the German theoretical biologist Adolf Meyer-Abich in 1943, and then apparently independently by Dr. Lynn Margulis in her 1991 book Symbiosis as a Source of Evolutionary Innovation. The concept has evolved since the original formulations. Holobionts include the host, virome, microbiome, and any other organisms which contribute in some way to the functioning of the whole. Well-studied holobionts include reef-building corals and humans.
Ruth Deborah Gates was the Director of the Hawaiʻi Institute of Marine Biology and the first woman to be President of the International Society for Reef Studies. Her research was dedicated to understanding coral reef ecosystems, specifically coral-algal symbiosis and the capacity for corals to acclimatize under future climate change conditions. Doctor Gates is most accredited with looking at coral biology and human-assisted coral evolution, known as super corals, as notably seen in the documentary Chasing Coral, available on Netflix.
Phyllodesmium poindimiei is an Alcyonacea feeding, aeolid nudibranch Gastropod belonging to the family Facelinidae. Cerata are important in this clade in terms of their physical defense and efficient metabolic processes. This species is spread sporadically along tropical coastal regions such as Australia, Hawaii, and the Indo-Pacific living in diverse marine habitats such as coral reefs. Unlike other species in the Opisthobranch Mollusca clade, P. poindimiei’s lush pink cerata are used for defensive purposes other than Nematocyst (dinoflagellate) capture and toxin release. Organismal ties within these thriving, tropical ecosystems can be determinants of environment change, which affects massive coral ecosystems. Continuously changing marine ecosystems, such as coral reefs, are directly linked to the evolution of organisms that live and thrive in the tropics such as the soft nudibrach P. poindimiei.
All animals on Earth form associations with microorganisms, including protists, bacteria, archaea, fungi, and viruses. In the ocean, animal–microbial relationships were historically explored in single host–symbiont systems. However, new explorations into the diversity of marine microorganisms associating with diverse marine animal hosts is moving the field into studies that address interactions between the animal host and a more multi-member microbiome. The potential for microbiomes to influence the health, physiology, behavior, and ecology of marine animals could alter current understandings of how marine animals adapt to change, and especially the growing climate-related and anthropogenic-induced changes already impacting the ocean environment.
Mary Alice Coffroth is an American marine biologist who is a professor at the State University of New York at Buffalo. She is known for her use of molecular tools to examined coral larval ecology, recruitment and cnidarian-dinoflagellate symbiosis.
Iliana B. Baums is a professor at Pennsylvania State University known for her work on coral reef ecology.
Oculina arbuscula is a branching temperate coral found along the east coast of the United States from Florida to North Carolina. It has a facultative symbiosis with microalgae of the family Symbiodiniaceae. Unlike tropical corals, O. arbuscula can survive without its algal endosymbionts by switching to a predominantly heterotrophic feeding strategy. Symbiotic colonies are typically found in shallower waters due to light availability, whereas aposymbiotic or mixed colonies are found as deep as 200m. The ability of O. arbuscula to exist in different symbiotic states makes it a good model system for studying the cnidarian-dinoflagellate symbiosis.
Symbiodiniaceae is a family of marine dinoflagellates notable for their symbiotic associations with reef-building corals, sea anemones, jellyfish, marine sponges, giant clams, acoel flatworms, and other marine invertebrates. Symbiotic Symbiodiniaceae are sometimes colloquially referred to as Zooxanthellae, though the latter term can be interpreted to include other families of symbiotic algae as well. While many Symbiodiniaceae species are endosymbionts, others are free living in the water column or sediment.
References
- ↑ Guiry, Michael D. (2022). "Durusdinium LaJeunesse, 2018". WoRMS. World Register of Marine Species . Retrieved 2023-02-07.
- ↑ Bellantuono, Anthony J; Dougan, Katherine E (6 November 2019). "Free-living and symbiotic lifestyles of a thermotolerant coral endosymbiont display profoundly distinct transcriptomes under both stable and heat stress conditions". Molecular Ecology. 28 (24): 5265–5281. doi:10.1111/mec.15300 . Retrieved 7 February 2023.
- ↑ Thinesh, T (August 2019). "Differential bleaching and recovery pattern of southeast Indian coral reef to 2016 global mass bleaching event: Occurrence of stress-tolerant symbiont Durusdinium (Clade D) in corals of Palk Bay". Marine Pollution Bulletin. 145: 287–294. doi:10.1016/j.marpolbul.2019.05.033 . Retrieved 7 February 2023.
- ↑ Abbott, Evelyn (22 September 2021). "Shuffling between Cladocopium and Durusdinium extensively modifies the physiology of each symbiont without stressing the coral host". Molecular Ecology. 30 (24): 6585–6595. doi:10.1111/mec.16190 . Retrieved 7 February 2023.
- ↑ Manzello, Derek P (15 December 2018). "Role of host genetics and heat-tolerant algal symbionts in sustaining populations of the endangered coral Orbicella faveolata in the Florida Keys with ocean warming". Global Change Biology. 25 (3): 1016–1031. doi: 10.1111/gcb.14545 . Retrieved 7 February 2023.
- ↑ LaJeunesse, Todd C (20 August 2018). "Systematic Revision of Symbiodiniaceae Highlights the Antiquity and Diversity of Coral Endosymbionts". Current Biology. 28 (16): 2570–2580. doi:10.1016/j.cub.2018.07.008. hdl: 10754/630499 . Retrieved 7 February 2023.