ERP29

ERP29
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 2QC7
Identifiers
Aliases	ERP29 , C12orf8, ERp28, ERp31, HEL-S-107, PDI-DB, PDIA9, endoplasmic reticulum protein 29
External IDs	OMIM: 602287; MGI: 1914647; HomoloGene: 4963; GeneCards: ERP29; OMA:ERP29 - orthologs
Gene location (Human) Chr. Chromosome 12 (human) [1] Band 12q24.13 Start 112,013,348 bp [1] End 112,023,449 bp [1]
Gene location (Mouse) Chr. Chromosome 5 (mouse) [2] Band 5|5 F Start 121,566,653 bp [2] End 121,590,569 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in monocyte beta cell trachea cardia granulocyte body of pancreas pylorus thymus bone marrow cells nipple Top expressed in supraoptic nucleus lip superior surface of tongue yolk sac corneal stroma gallbladder right kidney placenta dentate gyrus of hippocampal formation granule cell ankle joint More reference expression data BioGPS More reference expression data
Gene ontology Molecular function chaperone binding protein homodimerization activity protein disulfide isomerase activity protein binding Cellular component endoplasmic reticulum lumen membrane melanosome transport vesicle smooth endoplasmic reticulum cell surface endoplasmic reticulum extracellular exosome Biological process positive regulation of protein phosphorylation regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway negative regulation of gene expression protein secretion positive regulation of gene expression protein unfolding intracellular protein transport negative regulation of protein secretion protein folding Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 10961 67397 Ensembl ENSG00000089248 ENSMUSG00000029616 UniProt P30040 P57759 RefSeq (mRNA) NM_006817 NM_001034025 NM_026129 RefSeq (protein) NP_001029197 NP_006808 NP_080405 Location (UCSC) Chr 12: 112.01 – 112.02 Mb Chr 5: 121.57 – 121.59 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Endoplasmic reticulum protein 29 (ERp29) is a chaperone protein that in humans is encoded by the ERP29 gene. ^[5]

Function

ERp29 is a reticuloplasmin, a protein which resides in the lumen of the endoplasmic reticulum (ER). The protein shows sequence similarity to the protein disulfide-isomerase family. ^[6] However, it lacks the thioredoxin motif characteristic of this family, suggesting that this protein does not function as a disulfide isomerase. ^[6] The protein dimerizes and is thought to play a role in the processing of secretory proteins within the ER. Alternative splicing results in multiple transcript variants encoding different isoforms. ^[5]

References

1. GRCh38: Ensembl release 89: ENSG00000089248 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000029616 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. "Entrez Gene: ERP29 endoplasmic reticulum protein 29".
6. Galligan JJ, Petersen DR (July 2012). "The human protein disulfide isomerase gene family". Human Genomics. 6 (1): 6. doi: 10.1186/1479-7364-6-6 . PMC   3500226 . PMID   23245351.

Further reading

• Hubbard MJ (Sep 2002). "Functional proteomics: The goalposts are moving". Proteomics. 2 (9): 1069–78. doi:10.1002/1615-9861(200209)2:9<1069::AID-PROT1069>3.0.CO;2-R. PMID   12362325. S2CID   46402626.
• Mkrtchian S, Sandalova T (2006). "ERp29, an unusual redox-inactive member of the thioredoxin family". Antioxidants & Redox Signaling. 8 (3–4): 325–37. doi:10.1089/ars.2006.8.325. PMID   16677078.
• Hochstrasser DF, Frutiger S, Paquet N, Bairoch A, Ravier F, Pasquali C, Sanchez JC, Tissot JD, Bjellqvist B, Vargas R (Dec 1992). "Human liver protein map: a reference database established by microsequencing and gel comparison". Electrophoresis. 13 (12): 992–1001. doi:10.1002/elps.11501301201. PMID   1286669. S2CID   23518983.
• Hughes GJ, Frutiger S, Paquet N, Pasquali C, Sanchez JC, Tissot JD, Bairoch A, Appel RD, Hochstrasser DF (Nov 1993). "Human liver protein map: update 1993". Electrophoresis. 14 (11): 1216–22. doi:10.1002/elps.11501401181. PMID   8313870. S2CID   33424554.
• Mkrtchian S, Fang C, Hellman U, Ingelman-Sundberg M (Jan 1998). "A stress-inducible rat liver endoplasmic reticulum protein, ERp29". European Journal of Biochemistry. 251 (1–2): 304–13. doi: 10.1046/j.1432-1327.1998.2510304.x . PMID   9492298.
• Ferrari DM, Nguyen Van P, Kratzin HD, Söling HD (Aug 1998). "ERp28, a human endoplasmic-reticulum-lumenal protein, is a member of the protein disulfide isomerase family but lacks a CXXC thioredoxin-box motif". European Journal of Biochemistry. 255 (3): 570–9. doi: 10.1046/j.1432-1327.1998.2550570.x . PMID   9738895.
• Hubbard MJ, McHugh NJ (Nov 2000). "Human ERp29: isolation, primary structural characterisation and two-dimensional gel mapping". Electrophoresis. 21 (17): 3785–96. doi:10.1002/1522-2683(200011)21:17<3785::AID-ELPS3785>3.0.CO;2-2. PMID   11271497. S2CID   42538820.
• Shnyder SD, Hubbard MJ (Apr 2002). "ERp29 is a ubiquitous resident of the endoplasmic reticulum with a distinct role in secretory protein production". The Journal of Histochemistry and Cytochemistry. 50 (4): 557–66. doi: 10.1177/002215540205000413 . PMID   11897809.
• Sargsyan E, Baryshev M, Backlund M, Sharipo A, Mkrtchian S (Feb 2002). "Genomic organization and promoter characterization of the gene encoding a putative endoplasmic reticulum chaperone, ERp29". Gene. 285 (1–2): 127–39. CiteSeerX   10.1.1.593.9369 . doi:10.1016/S0378-1119(02)00417-1. PMID   12039039.
• Basrur V, Yang F, Kushimoto T, Higashimoto Y, Yasumoto K, Valencia J, Muller J, Vieira WD, Watabe H, Shabanowitz J, Hearing VJ, Hunt DF, Appella E (2003). "Proteomic analysis of early melanosomes: identification of novel melanosomal proteins". Journal of Proteome Research. 2 (1): 69–79. doi:10.1021/pr025562r. PMID   12643545.
• Lim J, Hao T, Shaw C, Patel AJ, Szabó G, Rual JF, Fisk CJ, Li N, Smolyar A, Hill DE, Barabási AL, Vidal M, Zoghbi HY (May 2006). "A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration". Cell. 125 (4): 801–14. doi: 10.1016/j.cell.2006.03.032 . PMID   16713569. S2CID   13709685.
• Cheretis C, Dietrich F, Chatzistamou I, Politi K, Angelidou E, Kiaris H, Mkrtchian S, Koutselini H (Oct 2006). "Expression of ERp29, an endoplasmic reticulum secretion factor in basal-cell carcinoma". The American Journal of Dermatopathology. 28 (5): 410–2. doi:10.1097/01.dad.0000211521.49810.ac. PMID   17012915. S2CID   1661765.
• Zheng J, Liu X, Yan X, Dai L, Ji C (2006). "Purification and structural characterization of human ERp29". Protein and Peptide Letters. 13 (8): 753–9. doi:10.2174/092986606777841190. PMID   17073718.
• Chi A, Valencia JC, Hu ZZ, Watabe H, Yamaguchi H, Mangini NJ, Huang H, Canfield VA, Cheng KC, Yang F, Abe R, Yamagishi S, Shabanowitz J, Hearing VJ, Wu C, Appella E, Hunt DF (Nov 2006). "Proteomic and bioinformatic characterization of the biogenesis and function of melanosomes". Journal of Proteome Research. 5 (11): 3135–44. doi:10.1021/pr060363j. PMID   17081065.
• Lippert U, Diao D, Barak NN, Ferrari DM (Apr 2007). "Conserved structural and functional properties of D-domain containing redox-active and -inactive protein disulfide isomerase-related protein chaperones" (PDF). The Journal of Biological Chemistry. 282 (15): 11213–20. doi: 10.1074/jbc.M604440200 . PMID   17296603. S2CID   25822309.