FAM135B

Last updated
FAM135B
Identifiers
Aliases FAM135B , C8ORFK32, family with sequence similarity 135 member B
External IDs MGI: 1917613 HomoloGene: 66605 GeneCards: FAM135B
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_015912
NM_001362965

NM_177819

RefSeq (protein)

NP_056996
NP_001349894

NP_808487

Location (UCSC) Chr 8: 138.13 – 138.5 Mb Chr 15: 71.3 – 71.6 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

FAM135B is a human gene coding for a protein of unknown function. [5] It is well conserved in primates, rodents, zebra fish. It has one paralog, FAM135A.

Contents

Gene

FAM135B is located on the long arm of Chromosome 8 in humans on the anti-sense located at 24.23. [5] The following genes are near FAM135B on the chromosome:

Expression

FAM135B is expressed in the brain, ear, eye, pancreas and testis. [6] Within the brain, expression is apparent within the motor nucleus of trigeminal [7] In addition, it is mainly expressed in normal health states, although it has shown moderate expression in glioma, non-neoplasima as well as expression in germ cell tumors. [6]

Visual Representation of expression in mouse brain.png

Interactions

FAM135B has shown to interact with KAT5, a gene that encodes for a histone acetyltransferase [8] through yeast two-hybrid experimentation.

Protein

The protein encoded on FAM135 is 1406 amino acids long. The protein contains a region called DUF676, believed to be a putative serine esterase as well as two protein regions called DUF3657. [5]

Graphical representation of protein FAM135B FAM135BProteinLayout.png
Graphical representation of protein FAM135B

Clinical significance

FAM135B has shown to be expressed in individuals with extrapulmonary tuberculosis. [9]

Related Research Articles

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<span class="mw-page-title-main">C19orf44</span> Mammalian protein found in Homo sapiens

Chromosome 19 open reading frame 44 is a protein that in humans is encoded by the C19orf44 gene. C19orf44 is an uncharacterized protein with an unknown function in humans. C19orf44 is non-limiting implying that the protein exists in other species besides human. The protein contains one domain of unknown function (DUF) that is highly conserved throughout its orthologs. This protein is most highly expressed in the testis and ovary, but also has significant expression in the thyroid and parathyroid. Other names for this protein include: LOC84167.

References

  1. 1 2 3 GRCh38: Ensembl release 89: ENSG00000147724 - Ensembl, May 2017
  2. 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000036800 - Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. 1 2 3 "FAM135B family with sequence similarity 135, member B [Homo sapiens]". NCBI. Retrieved 1 May 2011.
  6. 1 2 EST Profile - Hs.126024
  7. "1700010C24Rik". Allen Brain Atlas. Archived from the original on 2011-10-07.
  8. Stelzl U, Worm U, Lalowski M, Haenig C, Brembeck FH, Goehler H, Stroedicke M, Zenkner M, Schoenherr A, Koeppen S, Timm J, Mintzlaff S, Abraham C, Bock N, Kietzmann S, Goedde A, Toksöz E, Droege A, Krobitsch S, Korn B, Birchmeier W, Lehrach H, Wanker EE (September 2005). "A human protein-protein interaction network: a resource for annotating the proteome". Cell. 122 (6): 957–68. doi:10.1016/j.cell.2005.08.029. hdl: 11858/00-001M-0000-0010-8592-0 . PMID   16169070. S2CID   8235923.
  9. Oki NO, Motsinger-Reif AA, Antas PR, Levy S, Holland SM, Sterling TR (2011). "Novel human genetic variants associated with extrapulmonary tuberculosis: a pilot genome wide association study". BMC Res Notes. 4: 28. doi: 10.1186/1756-0500-4-28 . PMC   3041678 . PMID   21281516.