GAPVD1

Last updated
GAPVD1
Identifiers
Aliases GAPVD1 , GAPEX5, GAPex-5, RAP6, GTPase activating protein and VPS9 domains 1
External IDs OMIM: 611714 MGI: 1913941 HomoloGene: 32637 GeneCards: GAPVD1
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_025709
NM_001356441

RefSeq (protein)

NP_079985
NP_001343370

Location (UCSC) Chr 9: 125.26 – 125.37 Mb Chr 2: 34.67 – 34.76 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

GTPase activating protein and VPS9 domains 1, also known as GAPVD1, Gapex-5 and RME-6 is a protein which in humans is encoded by the GAPVD1 gene. [5] [6]

Function

GAPVD1 is Rab GTPase guanine nucleotide exchange factor essential for activation of RAB5A during engulfment of apoptotic cells. [7] GAPVD1 is also involved in the degradation of the epidermal growth factor receptor. [8] Gapex-5 mediated activation of Rab5 has been implicated in the insulin stimulated formation of plasma membrane phosphatidylinositol-3-phosphate. [9]

Structure

Based on sequence homology, mammalian Gapex-5 has been shown to have an amino-terminal Ras GAP domain, a central polyproline (SH3 binding) region and a carboxy-terminal Rab GEF domain. The RabGEF domain has been suggested to activate Rab5 [10] and Rab31. [11]

Related Research Articles

<span class="mw-page-title-main">G protein-coupled bile acid receptor</span> Protein-coding gene in the species Homo sapiens

The G protein-coupled bile acid receptor 1 (GPBAR1) also known G-protein coupled receptor 19 (GPCR19), membrane-type receptor for bile acids (M-BAR) or Takeda G protein-coupled receptor 5 (TGR5) as is a protein that in humans is encoded by the GPBAR1 gene.

<span class="mw-page-title-main">ERBB3</span> Protein found in humans

Receptor tyrosine-protein kinase erbB-3, also known as HER3, is a membrane bound protein that in humans is encoded by the ERBB3 gene.

<span class="mw-page-title-main">RAS p21 protein activator 1</span> Protein-coding gene in the species Homo sapiens

RAS p21 protein activator 1 or RasGAP, also known as RASA1, is a 120-kDa cytosolic human protein that provides two principal activities:

<span class="mw-page-title-main">Fibroblast growth factor receptor 4</span> Protein-coding gene in the species Homo sapiens

Fibroblast growth factor receptor 4 is a protein that in humans is encoded by the FGFR4 gene. FGFR4 has also been designated as CD334.

<span class="mw-page-title-main">RAB5A</span> Protein-coding gene in the species Homo sapiens

Ras-related protein Rab-5A is a protein that in humans is encoded by the RAB5A gene.

<span class="mw-page-title-main">TNK2</span> Protein-coding gene in the species Homo sapiens

Activated CDC42 kinase 1, also known as ACK1, is an enzyme that in humans is encoded by the TNK2 gene. TNK2 gene encodes a non-receptor tyrosine kinase, ACK1, that binds to multiple receptor tyrosine kinases e.g. EGFR, MERTK, AXL, HER2 and insulin receptor (IR). ACK1 also interacts with Cdc42Hs in its GTP-bound form and inhibits both the intrinsic and GTPase-activating protein (GAP)-stimulated GTPase activity of Cdc42Hs. This binding is mediated by a unique sequence of 47 amino acids C-terminal to an SH3 domain. The protein may be involved in a regulatory mechanism that sustains the GTP-bound active form of Cdc42Hs and which is directly linked to a tyrosine phosphorylation signal transduction pathway. Several alternatively spliced transcript variants have been identified from this gene, but the full-length nature of only two transcript variants has been determined.

<span class="mw-page-title-main">TRIP10</span> Protein-coding gene in the species Homo sapiens

Cdc42-interacting protein 4 is a protein that in humans is encoded by the TRIP10 gene.

<span class="mw-page-title-main">RHOQ</span> Protein-coding gene in the species Homo sapiens

Rho-related GTP-binding protein RhoQ is a protein that in humans is encoded by the RHOQ gene.

<span class="mw-page-title-main">Chimerin 2</span> Protein-coding gene in the species Homo sapiens

Chimerin 2 (beta-chimaerin) is a protein that in humans is encoded by the CHN2 gene.

<span class="mw-page-title-main">EHD1</span> Protein-coding gene in the species Homo sapiens

EH domain-containing protein 1, also known as testilin or PAST homolog 1 (PAST1), is a protein that in humans is encoded by the EHD1 gene belonging to the EHD protein family.

<span class="mw-page-title-main">RAB5B</span> Protein-coding gene in the species Homo sapiens

Ras-related protein Rab-5B is a protein that in humans is encoded by the RAB5B gene.

<span class="mw-page-title-main">GRB14</span> Protein-coding gene in the species Homo sapiens

Growth factor receptor-bound protein 14 is a protein that in humans is encoded by the GRB14 gene.

<span class="mw-page-title-main">RABGEF1</span> Protein-coding gene in the species Homo sapiens

Rab5 GDP/GTP exchange factor is a protein that in humans is encoded by the RABGEF1 gene.

<span class="mw-page-title-main">RIN1</span> Protein-coding gene in the species Homo sapiens

Ras and Rab interactor 1 is a protein that in humans is encoded by the RIN1 gene.

<span class="mw-page-title-main">USP6NL</span> Protein-coding gene in the species Homo sapiens

USP6 N-terminal-like protein is a protein that in humans is encoded by the USP6NL gene.

<span class="mw-page-title-main">DDEF2</span> Protein-coding gene in the species Homo sapiens

Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 is a protein that in humans is encoded by the ASAP2 gene.

<span class="mw-page-title-main">SNX26</span> Protein-coding gene in the species Homo sapiens

TC10/CDC42 GTPase-activating protein is an enzyme that in humans is encoded by the SNX26 gene.

<span class="mw-page-title-main">RAB34</span> Protein-coding gene in the species Homo sapiens

Ras-related protein Rab-34 is a protein that in humans is encoded by the RAB34 gene.

<span class="mw-page-title-main">RAB5C</span> Protein-coding gene in the species Homo sapiens

Ras-related protein Rab-5C is a protein that in humans is encoded by the RAB5C gene. RAB5C belongs to the Ras-related protein family.

<span class="mw-page-title-main">ZFYVE20</span> Protein-coding gene in the species Homo sapiens

Rabenosyn-5 is a protein that in humans is encoded by the ZFYVE20 gene.

References

  1. 1 2 3 GRCh38: Ensembl release 89: ENSG00000165219 - Ensembl, May 2017
  2. 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000026867 - Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. "Entrez Gene: GAPVD1 GTPase activating protein and VPS9 domains 1".
  6. Hunker CM, Galvis A, Kruk I, Giambini H, Veisaga ML, Barbieri MA (February 2006). "Rab5-activating protein 6, a novel endosomal protein with a role in endocytosis". Biochem. Biophys. Res. Commun. 340 (3): 967–75. doi:10.1016/j.bbrc.2005.12.099. PMID   16410077.
  7. Kitano M, Nakaya M, Nakamura T, Nagata S, Matsuda M (May 2008). "Imaging of Rab5 activity identifies essential regulators for phagosome maturation". Nature. 453 (7192): 241–5. Bibcode:2008Natur.453..241K. doi: 10.1038/nature06857 . PMID   18385674.
  8. Su X, Kong C, Stahl PD (July 2007). "GAPex-5 mediates ubiquitination, trafficking, and degradation of epidermal growth factor receptor". J. Biol. Chem. 282 (29): 21278–84. doi: 10.1074/jbc.M703725200 . PMID   17545148.
  9. Lodhi IJ, Bridges D, Chiang SH, Zhang Y, Cheng A, Geletka LM, Weisman LS, Saltiel AR (July 2008). "Insulin Stimulates Phosphatidylinositol 3-Phosphate Production via the Activation of Rab5". Mol. Biol. Cell. 19 (7): 2718–28. doi:10.1091/mbc.E08-01-0105. PMC   2441665 . PMID   18434594.
  10. Su X, Lodhi IJ, Saltiel AR, Stahl PD (September 2006). "Insulin-stimulated Interaction between insulin receptor substrate 1 and p85alpha and activation of protein kinase B/Akt require Rab5". J. Biol. Chem. 281 (38): 27982–90. doi: 10.1074/jbc.M602873200 . PMID   16880210.
  11. Lodhi IJ, Chiang SH, Chang L, Vollenweider D, Watson RT, Inoue M, Pessin JE, Saltiel AR (January 2007). "Gapex-5, a Rab31 Guanine Nucleotide Exchange Factor that Regulates Glut4 Trafficking in Adipocytes". Cell Metab. 5 (1): 59–72. doi:10.1016/j.cmet.2006.12.006. PMC   1779820 . PMID   17189207.

Further reading