LYPD3

LYPD3
Identifiers
Aliases	LYPD3 , C4.4A, LY6/PLAUR domain containing 3
External IDs	OMIM: 609484 MGI: 1919684 HomoloGene: 8672 GeneCards: LYPD3
Gene location (Human)
Chr.	Chromosome 19 (human)
End	43,465,608 bp
Gene location (Mouse)
Chr.	Chromosome 7 (mouse)
End	24,340,543 bp
RNA expression pattern
	Top expressed in
	skin of abdomen; ; nipple; ; vulva; ; human penis; ; body of tongue; ; cavity of mouth; ; vagina; ; hair follicle; ; palpebral conjunctiva; ; amniotic fluid;
	Top expressed in
	lip; ; esophagus; ; hair follicle; ; skin of abdomen; ; skin of back; ; conjunctival fornix; ; cornea; ; secondary oocyte; ; belly cord; ; stomach;
	More reference expression data
	More reference expression data
Gene ontology
Molecular function	laminin binding ;
Cellular component	integral component of membrane ; anchored component of membrane ; anchored component of plasma membrane ; membrane ; extracellular region ; extracellular space ; plasma membrane ;
Biological process	cell-matrix adhesion ; C-terminal protein lipidation ;
	Sources:Amigo / QuickGO
Orthologs
	27076
	72434
	ENSG00000124466
	ENSMUSG00000057454
	O95274
	Q91YK8
	NM_014400
	NM_133743
	NP_055215
	NP_598504
	Wikidata
View/Edit Human	View/Edit Mouse

Last updated September 30, 2022

Ly6/PLAUR domain-containing protein 3 is a protein that in humans is encoded by the LYPD3 gene.^[5]^[6]^[7]

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References

1 2 3 GRCh38: Ensembl release 89: ENSG00000124466 - Ensembl, May 2017
1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000057454 - Ensembl, May 2017
↑ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
↑ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
↑ Wurfel J, Seiter S, Stassar M, Claas A, Klas R, Rosel M, Marhaba R, Savelyeva L, Schwab M, Matzku S, Zoller M (Feb 2001). "Cloning of the human homologue of the metastasis-associated rat C4.4A". Gene. 262 (1–2): 35–41. doi:10.1016/S0378-1119(00)00515-1. PMID 11179665.
↑ Smith BA, Kennedy WJ, Harnden P, Selby PJ, Trejdosiewicz LK, Southgate J (Mar 2001). "Identification of genes involved in human urothelial cell-matrix interactions: implications for the progression pathways of malignant urothelium". Cancer Res. 61 (4): 1678–85. PMID 11245483.
↑ "Entrez Gene: LYPD3 LY6/PLAUR domain containing 3".

Paret C, Hildebrand D, Weitz J, et al. (2007). "C4.4A as a candidate marker in the diagnosis of colorectal cancer". Br. J. Cancer. 97 (8): 1146–56. doi:10.1038/sj.bjc.6604012. PMC 2360445 . PMID 17912244.
Kimura K, Wakamatsu A, Suzuki Y, et al. (2006). "Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes". Genome Res. 16 (1): 55–65. doi:10.1101/gr.4039406. PMC 1356129 . PMID 16344560.
Otsuki T, Ota T, Nishikawa T, et al. (2007). "Signal sequence and keyword trap in silico for selection of full-length human cDNAs encoding secretion or membrane proteins from oligo-capped cDNA libraries". DNA Res. 12 (2): 117–26. doi: 10.1093/dnares/12.2.117 . PMID 16303743.
Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928 . PMID 15489334.
Suzuki Y, Yamashita R, Shirota M, et al. (2004). "Sequence comparison of human and mouse genes reveals a homologous block structure in the promoter regions". Genome Res. 14 (9): 1711–8. doi:10.1101/gr.2435604. PMC 515316 . PMID 15342556.
Grimwood J, Gordon LA, Olsen A, et al. (2004). "The DNA sequence and biology of human chromosome 19". Nature. 428 (6982): 529–35. Bibcode:2004Natur.428..529G. doi: 10.1038/nature02399 . PMID 15057824.
Hansen LV, Gårdsvoll H, Nielsen BS, et al. (2004). "Structural analysis and tissue localization of human C4.4A: a protein homologue of the urokinase receptor". Biochem. J. 380 (Pt 3): 845–57. doi:10.1042/BJ20031478. PMC 1224211 . PMID 15012588.
Clark HF, Gurney AL, Abaya E, et al. (2003). "The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment". Genome Res. 13 (10): 2265–70. doi:10.1101/gr.1293003. PMC 403697 . PMID 12975309.
Fletcher GC, Patel S, Tyson K, et al. (2003). "hAG-2 and hAG-3, human homologues of genes involved in differentiation, are associated with oestrogen receptor-positive breast tumours and interact with metastasis gene C4.4a and dystroglycan". Br. J. Cancer. 88 (4): 579–85. doi:10.1038/sj.bjc.6600740. PMC 2377166 . PMID 12592373.
Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi: 10.1073/pnas.242603899 . PMC 139241 . PMID 12477932.
Adam PJ, Boyd R, Tyson KL, et al. (2003). "Comprehensive proteomic analysis of breast cancer cell membranes reveals unique proteins with potential roles in clinical cancer". J. Biol. Chem. 278 (8): 6482–9. doi: 10.1074/jbc.M210184200 . PMID 12477722.

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[refGRCh38Ensembl-1] 1 2 3 GRCh38: Ensembl release 89: ENSG00000124466 - Ensembl, May 2017

[refGRCm38Ensembl-2] 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000057454 - Ensembl, May 2017

[3] "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[4] "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[pmid11179665-5] Wurfel J, Seiter S, Stassar M, Claas A, Klas R, Rosel M, Marhaba R, Savelyeva L, Schwab M, Matzku S, Zoller M (Feb 2001). "Cloning of the human homologue of the metastasis-associated rat C4.4A". Gene. 262 (1–2): 35–41. doi:10.1016/S0378-1119(00)00515-1. PMID 11179665.

[pmid11245483-6] Smith BA, Kennedy WJ, Harnden P, Selby PJ, Trejdosiewicz LK, Southgate J (Mar 2001). "Identification of genes involved in human urothelial cell-matrix interactions: implications for the progression pathways of malignant urothelium". Cancer Res. 61 (4): 1678–85. PMID 11245483.

[entrez-7] "Entrez Gene: LYPD3 LY6/PLAUR domain containing 3".

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LYPD3

Related Research Articles

References

Further reading