NTN5

Last updated
NTN5
Available structures
PDB Ortholog search: PDBe RCSB
Identifiers
Aliases NTN5 , netrin 5
External IDs MGI: 2685330 HomoloGene: 17106 GeneCards: NTN5
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_145807

NM_001033356
NM_001289692
NM_001289693
NM_001358870

Contents

RefSeq (protein)

NP_665806

NP_001028528
NP_001276621
NP_001276622
NP_001345799

Location (UCSC) Chr 19: 48.66 – 48.67 Mb Chr 7: 45.33 – 45.34 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Netrin-5 (NTN5), also known as netrin-1-like protein, is a protein that in humans is encoded by the NTN5 gene. [5] Netrin-5 is included in the family of secreted laminin-related proteins.

Function

Netrin-5 functions are not fully clarified. However, it is believed to:

Clinical significance

A recent genome-wide association study (GWAS) has found that genetic variations in HAVCR2 are associated with late-onset sporadic Alzheimer’s disease (LOAD). However, it's unknown how netrin-5 mutation contributes to disease. [9]

Considering the role of NTN5 in cell migration, it is very possible that netrin-5 has an important role in human carcinogenesis, although currently no tumor type with NTN5 alterations has been identified. [10]

Related Research Articles

<span class="mw-page-title-main">Interleukin 19</span> Protein-coding gene in the species Homo sapiens

Interleukin 19 (IL-19) is an immunosuppressive protein that belongs to the IL-10 cytokine subfamily.

<span class="mw-page-title-main">CXCL3</span> Mammalian protein found in Homo sapiens

Chemokine ligand 3 (CXCL3) is a small cytokine belonging to the CXC chemokine family that is also known as GRO3 oncogene (GRO3), GRO protein gamma (GROg) and macrophage inflammatory protein-2-beta (MIP2b). CXCL3 controls migration and adhesion of monocytes and mediates its effects on its target cell by interacting with a cell surface chemokine receptor called CXCR2. More recently, it has been shown that Cxcl3 regulates cell autonomously the migration of the precursors of cerebellar granule neurons toward the internal layers of cerebellum, during the morphogenesis of cerebellum. Moreover, if the expression of Cxcl3 is reduced in cerebellar granule neuron precursors, this highly enhances the frequency of the medulloblastoma, the tumor of cerebellum. In fact, the reduced expression of Cxcl3 forces the cerebellar granule neuron precursors to remain at the surface of the cerebellum, where they highly proliferate under the stimulus of Sonic hedgehog, becoming target of transforming insults. Remarkably, the treatment with CXCL3 completely prevents the growth of medulloblastoma lesions in a Shh-type mouse model of medulloblastoma. Thus, CXCL3 is a target for medulloblastoma therapy. Cxcl3 is directly regulated transcriptionally by BTG2

<span class="mw-page-title-main">NEUROD1</span> Protein-coding gene in the species Homo sapiens

Neurogenic differentiation 1 (Neurod1), also called β2, is a transcription factor of the NeuroD-type. It is encoded by the human gene NEUROD1.

<span class="mw-page-title-main">DBN1</span> Protein-coding gene in the species Homo sapiens

Drebrin is a protein that in humans is encoded by the DBN1 gene.

<span class="mw-page-title-main">24-Dehydrocholesterol reductase</span> Mammalian protein found in Homo sapiens

24-Dehydrocholesterol reductase is a protein that in humans is encoded by the DHCR24 gene.

<span class="mw-page-title-main">Netrin 1</span> Protein-coding gene in the species Homo sapiens

Netrin-1 is a protein that in humans is encoded by the NTN1 gene.

<span class="mw-page-title-main">NAV2</span> Protein-coding gene in the species Homo sapiens

Neuron navigator 2 is a protein that in humans is encoded by the NAV2 gene. The vitamin A metabolite, all-trans retinoic acid (atRA), plays an important role in neuronal development, including neurite outgrowth. NAV2 is an atRA-responsive gene.

<span class="mw-page-title-main">LRRC4</span> Protein-coding gene in the species Homo sapiens

Leucine-rich repeat-containing protein 4 is a protein that in humans is encoded by the LRRC4 gene.

<span class="mw-page-title-main">SEMA5A</span> Protein-coding gene in the species Homo sapiens

Semaphorin-5A is a protein that in humans is encoded by the SEMA5A gene.

<span class="mw-page-title-main">SPEG</span> Protein-coding gene in the species Homo sapiens

Striated muscle preferentially expressed protein kinase, in the human is encoded by the SPEG gene, a member of the myosin light chain kinase protein family. SPEG is involved in the development of the muscle cell cytoskeleton, and the expression of this gene has important roles in the development of skeletal muscles, and their maintenance and function. Mutations are associated with centronuclear myopathies a group of congenital disorders where the cell nuclei are abnormally centrally placed.

<span class="mw-page-title-main">UNC5C</span> Protein-coding gene in the species Homo sapiens

Netrin receptor UNC5C is a protein that in humans is encoded by the UNC5C gene.

<span class="mw-page-title-main">TREM2</span> Protein-coding gene in the species Homo sapiens

Triggering receptor expressed on myeloid cells 2(TREM2) is a protein that in humans is encoded by the TREM2 gene. TREM2 is expressed on macrophages, immature monocyte-derived dendritic cells, osteoclasts, and microglia, which are immune cells in the central nervous system. In the liver, TREM2 is expressed by several cell types, including macrophages, that respond to injury. In the intestine, TREM2 is expressed by myeloid-derived dendritic cells and macrophage. TREM2 is overexpressed in many tumor types and has anti-inflammatory activities. It might therefore be a good therapeutic target.

<span class="mw-page-title-main">APPBP2</span> Protein-coding gene in the species Homo sapiens

Amyloid protein-binding protein 2 is a protein that in humans is encoded by the APPBP2 gene.

<span class="mw-page-title-main">CEMIP</span> Protein-coding gene in the species Homo sapiens

Cell migration-inducing and hyaluronan-binding protein (CEMIP), formerly known as KIAA1199, is a protein that in humans is encoded by the CEMIP gene. CEMIP has been shown to bind hyaluronic acid and catalyze its depolymerization independently of CD44 and hyaluronidases. Such function has also been validated in mice.

<span class="mw-page-title-main">FMNL2</span> Protein-coding gene in the species Homo sapiens

Formin-like protein 2 is a protein that in humans is encoded by the FMNL2 gene.

<span class="mw-page-title-main">ZG16</span>

Zymogen Granule Protein 16 is a protein that is encoded by the ZG16 gene. Other common names include hZG16, FLJ43571, FLJ92276, secretory lectin ZG16, jacalin-like lectin domain containing, JCLN, JCLN1, MGC183567, MGC34820, ZG16A, zymogen granule membrane protein 16, zymogen granule protein 16 homolog, and zymogen granule protein. The gene is located on Chromosome 16: 29,778,256-29,782,973. The gene obtains one transcript and 128 orthologues.

<span class="mw-page-title-main">WWC1</span> Protein-coding gene in the species Homo sapiens

Protein KIBRA also known as kidney and brain expressed protein (KIBRA) or WW domain-containing protein 1 (WWC1) is a protein that in humans is encoded by the WWC1 gene.

<span class="mw-page-title-main">SDK2</span> Protein-coding gene in the species Homo sapiens

Protein sidekick-2 is a protein that in humans is encoded by the SDK2 gene.

<span class="mw-page-title-main">CRLF3</span> Protein-coding gene in the species Homo sapiens

Cytokine receptor-like factor 3 is a protein that in humans is encoded by the CRLF3 gene.

<span class="mw-page-title-main">LILRA5</span> Protein-coding gene in the species Homo sapiens

Leukocyte immunoglobulin-like receptor subfamily A member 5 (LILR-A5) also known as CD85 antigen-like family member F (CD85f), immunoglobulin-like transcript 11 (ILT-11), and leukocyte immunoglobulin-like receptor 9 (LIR-9) is a protein that in humans is encoded by the LILRA5 gene. This gene is one of the leukocyte receptor genes that form a gene cluster on the chromosomal region 19q13.4. Four alternatively spliced transcript variants encoding distinct isoforms have been described.

References

  1. 1 2 3 GRCh38: Ensembl release 89: ENSG00000142233 - Ensembl, May 2017
  2. 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000070564 - Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. "NTN5 netrin 5 [Homo sapiens (human)] - Gene - NCBI". www.ncbi.nlm.nih.gov. Retrieved 2021-12-11.
  6. Yamagishi S, Yamada K, Sawada M, Nakano S, Mori N, Sawamoto K, et al. (2015). "Netrin-5 is highly expressed in neurogenic regions of the adult brain". Frontiers in Cellular Neuroscience. 9: 146. doi: 10.3389/fncel.2015.00146 . PMC   4403520 . PMID   25941474.
  7. Ikegaya S, Iga Y, Mikawa S, Zhou L, Abe M, Sakimura K, et al. (2020). "Decreased Proliferation in the Neurogenic Niche, Disorganized Neuroblast Migration, and Increased Oligodendrogenesis in Adult Netrin-5-Deficient Mice". Frontiers in Neuroscience. 14: 570974. doi: 10.3389/fnins.2020.570974 . PMC   7726356 . PMID   33324143.
  8. 1 2 Gaudet P, Livstone MS, Lewis SE, Thomas PD (September 2011). "Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium". Briefings in Bioinformatics. 12 (5): 449–462. doi:10.1093/bib/bbr042. PMC   3178059 . PMID   21873635.
  9. Wightman DP, Jansen IE, Savage JE, Shadrin AA, Bahrami S, Holland D, et al. (September 2021). "A genome-wide association study with 1,126,563 individuals identifies new risk loci for Alzheimer's disease". Nature Genetics. 53 (9): 1276–1282. doi:10.1038/s41588-021-00921-z. hdl: 1871.1/61f01aa9-6dc7-4213-be2a-d3fe622db488 . PMC   10243600 . PMID   34493870. S2CID   237442349.
  10. Bruikman CS, Zhang H, Kemper AM, van Gils JM (2019-02-24). "Netrin Family: Role for Protein Isoforms in Cancer". Journal of Nucleic Acids. 2019: 3947123. doi: 10.1155/2019/3947123 . PMC   6408995 . PMID   30923634.