Nidogen

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Nidogens, formerly known as entactins, are a family of sulfated monomeric glycoproteins located in the basal lamina [1] of parahoxozoans. [2] Two nidogens have been identified in humans: nidogen-1 (NID1) and nidogen-2 (NID2). [3] Remarkably, vertebrates are still capable of stabilizing basement membrane in the absence of either identified nidogen. [4] In contrast, those lacking both nidogen-1 and nidogen-2 typically die prematurely during embryonic development as a result of defects existing in the heart and lungs. [5] Nidogen have been shown to play a crucial role during organogenesis in late embryonic development, particularly in cardiac and lung development. [6] From an evolutionary perspective, nidogens are highly conserved across vertebrates and invertebrates, retaining their ability to bind laminin. [7]

In nematodes, nidogen-1 is necessary for axon guidance, but not for basement membrane assembly. [8]

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Gap junction Cell-cell junction composed of innexins or connexins,

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Embryoid body Three-dimensional aggregate of pluripotent stem cells

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Basement membrane Thin fibrous layer between the cells and the adjacent connective tissue in animals

The basement membrane is a thin, pliable sheet-like type of extracellular matrix that provides cell and tissue support and acts as a platform for complex signalling. The basement membrane sits between epithelial tissues including mesothelium and endothelium, and the underlying connective tissue.

Nidogen-1

Nidogen-1 (NID-1), formerly known as entactin, is a protein that in humans is encoded by the NID1 gene. Both nidogen-1 and nidogen-2 are essential components of the basement membrane alongside other components such as type IV collagen, proteoglycans, laminin and fibronectin.

Netrin Class of proteins involved in axon guidance

Netrins are a class of proteins involved in axon guidance. They are named after the Sanskrit word "netr", which means "one who guides". Netrins are genetically conserved across nematode worms, fruit flies, frogs, mice, and humans. Structurally, netrin resembles the extracellular matrix protein laminin.

Laminin Protein in the extracellular matrix

Laminins are a family of glycoproteins of the extracellular matrix of all animals. They are major components of the basal lamina, the protein network foundation for most cells and organs. The laminins are an important and biologically active part of the basal lamina, influencing cell differentiation, migration, and adhesion.

Matrigel is the trade name for the solubilized basement membrane matrix secreted by Engelbreth-Holm-Swarm (EHS) mouse sarcoma cells produced by Corning Life Sciences. Matrigel resembles the laminin/collagen IV-rich basement membrane extracellular environment found in many tissues and is used by cell biologists as a substrate for culturing cells.

Agrin Mammalian protein found in Homo sapiens

Agrin is a large proteoglycan whose best-characterised role is in the development of the neuromuscular junction during embryogenesis. Agrin is named based on its involvement in the aggregation of acetylcholine receptors during synaptogenesis. In humans, this protein is encoded by the AGRN gene.

Laminin, alpha 5 Protein-coding gene in the species Homo sapiens

Laminin subunit alpha-5 is a protein that in humans is encoded by the LAMA5 gene.

Ribosomal protein SA

40S ribosomal protein SA is a ribosomal protein that in humans is encoded by the RPSA gene. It also acts as a cell surface receptor, in particular for laminin, and is involved in several pathogenic processes.

Laminin, alpha 1

Laminin subunit alpha-1 is a protein that in humans is encoded by the LAMA1 gene.

Laminin, gamma 1

Laminin subunit gamma-1 is a protein that in humans is encoded by the LAMC1 gene.

Laminin, beta 1

Laminin subunit beta-1 is a protein that in humans is encoded by the LAMB1 gene.

Laminin, alpha 2

Laminin subunit alpha-2 is a protein that in humans is encoded by the LAMA2 gene.

FBLN2

Fibulin-2 is a protein that in humans is encoded by the FBLN2 gene.

Nidogen-2

Nidogen-2, also known as osteonidogen, is a basal lamina protein of the nidogen family. It was the second nidogen to be described after nidogen-1 (entactin). Both play key roles during late embryonic development. In humans it is encoded by the NID2 gene.

Laminin, gamma 3 Protein-coding gene in the species Homo sapiens

Laminin subunit gamma-3 also known as LAMC3 is a protein that in humans is encoded by the LAMC3 gene.

UNC is a set of proteins first identified through a set of screening tests in Caenorhabditis elegans, looking for roundworms with movement problems. Worms with which were un-coordinated were analysed in order to identify the genetic defect. Such proteins include UNC-5, a receptor for UNC-6 which is one of the netrins. Netrins are a class of proteins involved in axon guidance. UNC-5 uses repulsion (genetics) to direct axons while the other netrin receptor UNC-40 attracts axons to the source of netrin production.

UNC-5 is a receptor for netrins including UNC-6. Netrins are a class of proteins involved in axon guidance. UNC-5 uses repulsion to direct axons while the other netrin receptor UNC-40 attracts axons to the source of netrin production.

References

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  2. Nielsen, C. (2019). Early animal evolution: A morphologist's view. Royal Society Open Science, 6 (7), 190638. https://doi.org/10.1098/rsos.190638
  3. Miosge N, Holzhausen S, Zelent C, Sprysch P, Herken R (2001). "Nidogen-1 and nidogen-2 are found in basement membranes during human embryonic development". The Histochemical Journal. 33 (9–10): 523–30. doi:10.1023/A:1014995523521. PMID   12005023. S2CID   818451.
  4. Lössl P, Kölbel K, Tänzler D, Nannemann D, Ihling CH, Keller MV, Schneider M, Zaucke F, Meiler J, Sinz A (2014-11-11). Kobe B (ed.). "Analysis of nidogen-1/laminin γ1 interaction by cross-linking, mass spectrometry, and computational modeling reveals multiple binding modes". PLOS ONE. 9 (11): e112886. Bibcode:2014PLoSO...9k2886L. doi: 10.1371/journal.pone.0112886 . PMC   4227867 . PMID   25387007.
  5. Fox MA, Ho MS, Smyth N, Sanes JR (September 2008). "A synaptic nidogen: developmental regulation and role of nidogen-2 at the neuromuscular junction". Neural Development. 3 (1): 24. doi:10.1186/1749-8104-3-24. PMC   2567315 . PMID   18817539.
  6. Bader BL, Smyth N, Nedbal S, Miosge N, Baranowsky A, Mokkapati S, Murshed M, Nischt R (August 2005). "Compound genetic ablation of nidogen 1 and 2 causes basement membrane defects and perinatal lethality in mice". Molecular and Cellular Biology. 25 (15): 6846–56. doi:10.1128/MCB.25.15.6846-6856.2005. PMC   1190363 . PMID   16024816.
  7. Mayer U, Kohfeldt E, Timpl R (October 1998). "Structural and genetic analysis of laminin-nidogen interaction". Annals of the New York Academy of Sciences. 857 (1): 130–42. Bibcode:1998NYASA.857..130M. doi:10.1111/j.1749-6632.1998.tb10113.x. PMID   9917838. S2CID   36725654.
  8. Kim, S. (2000-04-07). "Positioning of Longitudinal Nerves in C. elegans by Nidogen". Science. 288 (5463): 150–154. Bibcode:2000Sci...288..150K. doi:10.1126/science.288.5463.150. ISSN   0036-8075. PMID   10753123.