Paraburkholderia oxyphila

Last updated

Paraburkholderia oxyphila
Scientific classification Red Pencil Icon.png
Domain: Bacteria
Phylum: Pseudomonadota
Class: Betaproteobacteria
Order: Burkholderiales
Family: Burkholderiaceae
Genus: Paraburkholderia
Species:
P. oxyphila
Binomial name
Paraburkholderia oxyphila
(Otsuka et al. 2011) Sawana et al. 2015 [1]
Type strain
DSM 22550T [2]

LMG 26376T
NBRC 105797T
Otsuka OX-01T
OX-01T

Synonyms
  • Burkholderia oxyphilaOtsuka et al. 2011 [3]

Paraburkholderia oxyphila is a gram-negative, aerobic, non-spore-forming, non motile, rod-shaped bacterium from the genus Paraburkholderia and the family Burkholderiaceae which was isolated from acidic forest soil. [4] [5]

Related Research Articles

<span class="mw-page-title-main">Burkholderiaceae</span> Family of bacteria

The Burkholderiaceae are a family of bacteria included in the order Burkholderiales. It includes some pathogenic species, such as Burkholderia mallei (glanders) and Burkholderia pseudomallei (melioidosis).

Paraburkholderia sacchari is a species of bacteria in the phylum Pseudomonadota. It was isolated in the 1990s from sugarcane crop soil, and later identified as a new bacterial species, originally named as Burkholderia sacchari. Paraburkholderia sacchari was found to be capable of creating and accumulating polyhydroxyalkanoates (PHA) by incorporating different monomers. This strain was subject of a number of genetic and bioproccess engineering studies conducted worldwide aiming to establish PHA production from different substrates, especially using agro-industrial byproducts.

Paraburkholderia acidipaludis is a Gram-negative, catalase- and oxidase-positive, aerobic, aluminium-tolerant, non-spore-forming, nonmotile bacterium of the genus Paraburkholderia and the family Burkholderiaceae, which was isolated from the Chinese water chestnut in Vietnam and Thailand. Colonies of Paraburkholderia acidipaludis are pale yellow.

Paraburkholderia bannensis is a Gram-negative, aerobic, non-spore-forming bacterium of the genus Paraburkholderia and the family Burkholderiaceae, which was isolated from highly acidic swamps from torpedo grass in Thailand. It has the ability to neutralize acid.

Paraburkholderia diazotrophica is a gram-negative, catalase and oxidase-positive, aerobic, non-spore-forming, motile bacterium from the genus Paraburkholderia and the family Burkholderiaceae which was isolated from the nitrogen-fixing nodules on the roots of a Mimosa. Colonies of Paraburkholderia diazotrophica are yellow pigmented.

Paraburkholderia ferrariae is a gram-negative, catalase and oxidase-positive, non-spore-forming, bacterium from the genus Paraburkholderia and the family Burkholderiaceae which was isolated from a high phosphorus iron ore in the Minas Gerais State in Brazil. Paraburkholderia ferrariae has the ability to solubilize highly insoluble phosphatic minerals.

Paraburkholderia ginsengisoli is a gram-negative, rod-shaped, motile bacterium with unipolar polytrichous flagella from the genus Paraburkholderia and the family Burkholderiaceae which was isolated from soil of a ginseng field in South Korea. Paraburkholderia ginsengisoli has the ability to produce β-glucosidase.

Paraburkholderia heleia is a gram-negative, nitrogen-fixing, aerobic, non-spore-forming, rod-shaped bacterium from the genus Paraburkholderia and the family Burkholderiaceae which was isolated from the Chinese water chestnut Eleocharis dulcis in acid sulfate soil areas of Vietnam. Colonies of Burkholderia heleia are pale yellow.

Paraburkholderia nodosa is a gram-negative, catalase and oxidase-positive, non-spore-forming, bacterium from the genus Paraburkholderia and the family Burkholderiaceae which was isolated from nitrogen-fixing nodules from roots of Mimosa bimucronata and Mimosa scabrella.

Paraburkholderia sabiae is a Gram-negative, catalase- and oxidase-positive non-spore-forming bacterium of the genus Paraburkholderia and the family Burkholderiaceae, which was isolated from the nitrogen-fixing nodules on the roots of Mimosa caesalpiniaefolia in Brazil.

Paraburkholderia sartisoli is a gram-negative, aerobic catalase and oxidase-positive rod-shaped bacterium from the genus Paraburkholderia and the family Burkholderiaceae which was isolated from polycyclic aromatic hydrocarbon contaminated soil in New Zealand.

Paraburkholderia silvatlantica is a gram-negative, catalase and oxidase-positive nitrogen-fixing bacterium from the genus Paraburkholderia and the family Burkholderiaceae which was isolated from the rhizosphere of maize in Seropédica in Rio de Janeiro. Colonies of Paraburkholderia silvatlantica are cream-coloured with yellow in the centre.

Paraburkholderia soli is a gram-negative, catalase and oxidase-positive strictly aerobic, non motile bacterium from the genus Paraburkholderia and the family Burkholderiaceae which was isolated from soil and cultivated with Korean ginseng.

Paraburkholderia terrae is a Gram-negative, nitrogen-fixing, catalase and oxidase-positive, motile bacterium with a single polar flagellum, from the genus Paraburkholderia and family Burkholderiaceae, which was isolated from a forest soil in Daejeon in South Korea.

Paraburkholderia denitrificans is a gram-negative, bacterium from the genus Paraburkholderia and the family Burkholderiaceae which was isolated from wet forest soil on the island of Liancourt Rocks. Paraburkholderia denitrificans has the ability to reduced nitrate to nitrogen gas.

Paraburkholderia symbiotica is a gram-negative, catalase and oxidase-positive, aerobic, non-spore-forming, non-motile bacterium from the genus Paraburkholderia and the family Burkholderiaceae which was isolated from root nodules of a Mimosa in north east Brazil.

Caballeronia humi is a Gram-negative, aerobic, non-motile bacterium from the genus Burkholderia and the family Burkholderiaceae which was isolated from peat soil in Russia.

Paraburkholderia monticola is a Gram-negative, short-rod-shaped and aerobic bacterium from the genus Paraburkholderia which has been isolated from soil from the Gwanak Mountain in Korea.

Paraburkholderia rhizosphaerae is a bacterium from the genus of Paraburkholderia which has been isolated from rhizosphere soil in Daejeon in Korea.

Paraburkholderia is a genus of Pseudomonadota that are gram negative, slightly curved rods that are motile by means of flagella. They have been reported to colonize endophytic tissues of hybrid spruce and lodgepole pine with a strong potential to perform biological nitrogen fixation and plant growth promotion. Unlike Burkholderia species, Paraburkholderia members are not commonly associated with human infection. Paraburkholderia members form a monophyletic clade within the Burkholderiaceae family, which is what prompted their distinction as a genus independent from Burkholderia species, in combination with the finding of robust conserved signature indels which are unique to Paraburkholderia species, and are lacking in members of the genus Burkholderia. These CSIs distinguish the genus from all other bacteria. Additionally, the CSIs that were found to be shared by Burkholderia species are absent in Paraburkholderia, providing evidence of separate lineages.

References

  1. Sawana A, Adeolu M, Gupta RS (2014). "Molecular signatures and phylogenomic analysis of the genus Burkholderia: Proposal for division of this genus into the emended genus Burkholderia containing pathogenic organisms and a new genus Paraburkholderia gen. nov. harboring environmental species". Front. Genet. 5: 429. doi: 10.3389/fgene.2014.00429 . PMC   4271702 . PMID   25566316.
  2. "OX-01 Strain Passport - StrainInfo". Archived from the original on March 4, 2016.
  3. "J.P. Euzéby: List of bacterial names with standing in nomenclature".
  4. Otsuka, Y; Muramatsu, Y; Nakagawa, Y; Matsuda, M; Nakamura, M; Murata, H (2011). "Burkholderia oxyphila sp. nov., a bacterium isolated from acidic forest soil that catabolizes (+)-catechin and its putative aromatic derivatives". Int. J. Syst. Evol. Microbiol. 61 (Pt 2): 249–54. doi: 10.1099/ijs.0.017368-0 . PMID   20207808.
  5. "Paraburkholderia oxyphila".