SCAMP5

SCAMP5
Identifiers
Aliases	SCAMP5 , secretory carrier membrane protein 5
External IDs	OMIM: 613766; MGI: 1928948; HomoloGene: 56880; GeneCards: SCAMP5; OMA:SCAMP5 - orthologs
Gene location (Human) Chr. Chromosome 15 (human) [1] Band 15q24.2 Start 74,957,219 bp [1] End 75,021,495 bp [1]
Gene location (Mouse) Chr. Chromosome 9 (mouse) [2] Band 9|9 B Start 57,348,610 bp [2] End 57,375,343 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in right hemisphere of cerebellum right frontal lobe prefrontal cortex anterior cingulate cortex Brodmann area 9 Brodmann area 10 nucleus accumbens amygdala islet of Langerhans caudate nucleus Top expressed in neural layer of retina dentate gyrus of hippocampal formation granule cell primary visual cortex superior frontal gyrus cerebellar cortex central gray substance of midbrain subiculum nucleus of stria terminalis hippocampus proper prefrontal cortex More reference expression data BioGPS More reference expression data
Gene ontology Molecular function protein binding protein-containing complex binding Cellular component integral component of membrane cell junction Golgi membrane recycling endosome membrane plasma membrane endosome Golgi apparatus SNARE complex synapse trans-Golgi network membrane synaptic vesicle membrane membrane cytoplasmic vesicle Biological process protein transport negative regulation of endocytosis response to endoplasmic reticulum stress exocytosis positive regulation of calcium ion-dependent exocytosis Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 192683 56807 Ensembl ENSG00000198794 ENSMUSG00000040722 UniProt Q8TAC9 Q9JKD3 RefSeq (mRNA) NM_001178111 NM_001178112 NM_138967 NM_001301634 NM_001301635 NM_020270 RefSeq (protein) NP_001171582 NP_001171583 NP_620417 NP_001171582.1 NP_001171583.1 NP_620417.1 NP_001288563 NP_001288564 NP_064666 Location (UCSC) Chr 15: 74.96 – 75.02 Mb Chr 9: 57.35 – 57.38 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Secretory carrier-associated membrane protein 5 is a protein that in humans is encoded by the SCAMP5 gene. ^{[5] [6]}

References

1. GRCh38: Ensembl release 89: ENSG00000198794 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000040722 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD, Collins FS, et al. (December 2002). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proceedings of the National Academy of Sciences of the United States of America. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi: 10.1073/pnas.242603899 . PMC   139241 . PMID   12477932.
6. "Entrez Gene: SCAMP5 secretory carrier membrane protein 5".

Further reading

• Fernández-Chacón R, Südhof TC (November 2000). "Novel SCAMPs lacking NPF repeats: ubiquitous and synaptic vesicle-specific forms implicate SCAMPs in multiple membrane-trafficking functions" (PDF). The Journal of Neuroscience. 20 (21): 7941–50. doi: 10.1523/jneurosci.20-21-07941.2000 . PMC   6772721 . PMID   11050114.
• Hartley JL, Temple GF, Brasch MA (November 2000). "DNA cloning using in vitro site-specific recombination". Genome Research. 10 (11): 1788–95. doi:10.1101/gr.143000. PMC   310948 . PMID   11076863.
• Wiemann S, Weil B, Wellenreuther R, Gassenhuber J, Glassl S, Ansorge W, Böcher M, Blöcker H, Bauersachs S, Blum H, Lauber J, Düsterhöft A, Beyer A, Köhrer K, Strack N, Mewes HW, Ottenwälder B, Obermaier B, Tampe J, Heubner D, Wambutt R, Korn B, Klein M, Poustka A (March 2001). "Toward a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs". Genome Research. 11 (3): 422–35. doi:10.1101/gr.GR1547R. PMC   311072 . PMID   11230166.
• Wiemann S, Arlt D, Huber W, Wellenreuther R, Schleeger S, Mehrle A, Bechtel S, Sauermann M, Korf U, Pepperkok R, Sültmann H, Poustka A (October 2004). "From ORFeome to biology: a functional genomics pipeline". Genome Research. 14 (10B): 2136–44. doi:10.1101/gr.2576704. PMC   528930 . PMID   15489336.
• Lin PJ, Williams WP, Luu Y, Molday RS, Orlowski J, Numata M (May 2005). "Secretory carrier membrane proteins interact and regulate trafficking of the organellar (Na+,K+)/H+ exchanger NHE7". Journal of Cell Science. 118 (Pt 9): 1885–97. doi: 10.1242/jcs.02315 . PMID   15840657.
• Mehrle A, Rosenfelder H, Schupp I, del Val C, Arlt D, Hahne F, Bechtel S, Simpson J, Hofmann O, Hide W, Glatting KH, Huber W, Pepperkok R, Poustka A, Wiemann S (January 2006). "The LIFEdb database in 2006". Nucleic Acids Research. 34 (Database issue): D415-8. doi:10.1093/nar/gkj139. PMC   1347501 . PMID   16381901.