| Sobemovirus | |
|---|---|
 | |
| Genome of Sesbania mosaic virus | |
Virus classification  | |
| (unranked): | Virus |
| Realm: | Riboviria |
| Kingdom: | Orthornavirae |
| Phylum: | Pisuviricota |
| Class: | Pisoniviricetes |
| Order: | Sobelivirales |
| Family: | Solemoviridae |
| Genus: | Sobemovirus |
Sobemovirus is a genus of non-enveloped, positive-strand RNA viruses which infect plants.. Plants serve as natural hosts. There are 21 species in this genus. Diseases associated with this genus include: mosaics and mottles. [1] [2]
Viruses in Sobemovirus are non-enveloped, with icosahedral geometries, and T=3 symmetry. The diameter is around 30 nm. [1]
| Genus | Structure | Symmetry | Capsid | Genomic arrangement | Genomic segmentation |
|---|---|---|---|---|---|
| Sobemovirus | Icosahedral | T=3 | Non-enveloped | Linear | Monopartite |
The genome is a single piece of linear, positive-sense, single-stranded RNA, 4,100–5,700 nucleotides in length. [3] The genome encodes five open reading frames: ORF1, ORFs 2a and 2b, ORF3 and ORFx. [4]
ORF1 encodes P1 which plays a role in suppression of silencing and virus movement.
ORFs 2a and 2b encode the replicational polyproteins P2a and P2ab. Translation of ORF2a from the genomic RNA is dependent on a leaky scanning mechanism.[ citation needed ]
ORF3 encodes the coat protein.[ citation needed ]
ORFx is conserved in all sobemoviruses. It overlaps the 5' end of ORF2a in the +2 reading frame and also extends some distance upstream of ORF2a. It lacks an AUG initiation codon and its expression is predicted to depend on low level initiation at near-cognate non-AUG codons, such as CUG, by a proportion of the ribosomes that are scanning the region between the ORF1 and ORF2a initiation codons. Its function is unknown but it appears to be essential for infection.[ citation needed ]
The genus includes the following species: [2]
Viral replication is cytoplasmic. Entry into the host cell is achieved by penetration into the host cell. Replication follows the positive stranded RNA virus replication model. Positive stranded RNA virus transcription is the method of transcription. Translation takes place by leaky scanning, and −1 ribosomal frameshifting. The virus exits the host cell by tubule-guided viral movement. Plants serve as the natural host. The virus is transmitted via a vector (CFMV: insects). Transmission routes are vector and seed borne. [1]
| Genus | Host details | Tissue tropism | Entry details | Release details | Replication site | Assembly site | Transmission |
|---|---|---|---|---|---|---|---|
| Sobemovirus | Plants | None | Penetration | Viral Movement | Cytoplasm | Cytoplasm | Vector, Seed borne |
Tombusviridae is a family of single-stranded positive sense RNA plant viruses. There are three subfamilies, 17 genera, and 95 species in this family. The name is derived from Tomato bushy stunt virus (TBSV).
Tymoviridae is a family of single-stranded positive sense RNA viruses in the order Tymovirales. Plants serve as natural hosts. There are 42 species in this family, assigned to three genera, with two species unassigned to a genus.
Tobamovirus is a genus of positive-strand RNA viruses in the family Virgaviridae. Many plants, including tobacco, potato, tomato, and squash, serve as natural hosts. Diseases associated with this genus include: necrotic lesions on leaves. The name Tobamovirus comes from the host and symptoms of the first virus discovered.
Nepovirus is a genus of viruses in the order Picornavirales, in the family Secoviridae, in the subfamily Comovirinae. Plants serve as natural hosts. There are 40 species in this genus. Nepoviruses, unlike the other two genera in the subfamily Comovirinae, are transmitted by nematodes.
Luteovirus is a genus of viruses, in the family Tombusviridae. There are 13 species in this genus. Plants serve as natural hosts. The geographical distribution of Luteoviruses is widespread, with the virus primarily infecting plants via transmission by aphid vectors. The virus only replicates within the host cell and not within the vector. The name 'luteovirus' arises from the Latin luteus, which is translated as 'yellow'. Luteovirus was given this name due to the symptomatic yellowing of the plant that occurs as a result of infection.
Benyvirus is a genus of viruses, in the family Benyviridae. Plants serve as natural hosts. There are four species in this genus. Diseases associated with this genus include: BNYVV: rhizomania.
Pecluvirus is a genus of viruses, in the family Virgaviridae. Cereal crops and graminaceous weeds serve as natural hosts. There are two species in this genus. Diseases associated with this genus include: (SBWMV): green and yellow mosaic. The name of the genus is derived from Peanut clump virus: Peanut clump virus, giving rise to Pecluvirus.
Potexvirus is a genus of pathogenic viruses in the order Tymovirales, in the family Alphaflexiviridae. Plants serve as natural hosts. There are 48 species in this genus, three of which are assigned to a subgenus. Diseases associated with this genus include: mosaic and ringspot symptoms. The genus name comes from POTato virus X).
Carlavirus, formerly known as the "Carnation latent virus group", is a genus of viruses in the order Tymovirales, in the family Betaflexiviridae. Plants serve as natural hosts. There are 53 species in this genus. Diseases associated with this genus include: mosaic and ringspot symptoms.
Cucumovirus is a genus of viruses, in the family Bromoviridae. Plants serve as natural hosts. There are four species in this genus.
Alphaflexiviridae is a family of viruses in the order Tymovirales. Plants and fungi serve as natural hosts. There are 65 species in this family, assigned to six genera. Diseases associated with this family include: mosaic and ringspot symptoms.
Aureusvirus is a genus of viruses, in the family Tombusviridae. Plants serve as natural hosts. There are six species in this genus.
Bromovirus is a genus of viruses, in the family Bromoviridae. Plants serve as natural hosts. There are six species in this genus.
Comovirus is a genus of viruses in the order Picornavirales, in the family Secoviridae, in the subfamily Comovirinae. Plants serve as natural hosts. There are 15 species in this genus.
Enamovirus is a genus of viruses, in the family Solemoviridae. Plants serve as natural hosts. There are five species in this genus. Diseases associated with this genus include: pea enation disease: if both PEMV-1 and PEMV-2 are present.
Polemovirus is a genus of viruses. Commercial cultivars of Euphorbia pulcherrima serve as natural hosts. There is only one species in this genus: Poinsettia latent virus. Its RNA suggests a replication mode like that of poleroviruses, whereas the coat protein sequence is closely related to that of sobemoviruses.
Polerovirus is a genus of viruses, in the family Solemoviridae. Plants serve as natural hosts. There are 26 species in this genus. Diseases associated with this genus include: PLRV causes prominent rolling of the leaves of potato and a stiff upright habit of the plants; necrosis of the phloem and accumulation of carbohydrates in the leaves.
Tritimovirus is a genus of viruses, in the family Potyviridae. Plants serve as natural hosts. There are six species in this genus.
Tymovirus is a genus of viruses in the order Tymovirales, in the family Tymoviridae. Plants serve as natural hosts. There are 28 species in this genus.
Lily virus X (LVX) is a pathogenic ssRNA(+) plant virus of the family Alphaflexiviridae and the order Tymovirales.