Stomatin

"STOM" redirects here. For Ship-to-objective maneuver, see Expeditionary maneuver warfare.

STOM
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 4FVF, 4FVG, 4FVJ
Identifiers
Aliases	STOM , BND7, EPB7, EPB72, stomatin
External IDs	OMIM: 133090; MGI: 95403; HomoloGene: 81681; GeneCards: STOM; OMA:STOM - orthologs
Gene location (Human) Chr. Chromosome 9 (human) [1] Band 9q33.2 Start 121,338,987 bp [1] End 121,370,304 bp [1]
Gene location (Mouse) Chr. Chromosome 2 (mouse) [2] Band 2 B|2 23.53 cM Start 35,203,998 bp [2] End 35,226,988 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in visceral pleura pericardium vena cava trabecular bone saphenous vein right lung palpebral conjunctiva lower lobe of lung parietal pleura epithelium of colon Top expressed in olfactory epithelium spermatocyte fetal liver hematopoietic progenitor cell blood tibiofemoral joint secondary oocyte zygote brown adipose tissue right ventricle ankle More reference expression data BioGPS More reference expression data
Gene ontology Molecular function protein homodimerization activity protein binding RNA polymerase binding identical protein binding Cellular component vesicle blood microparticle membrane melanosome integral component of plasma membrane endoplasmic reticulum mitochondrion perinuclear region of cytoplasm membrane raft extracellular exosome cytoskeleton cytoplasmic vesicle extracellular space cytoplasm cytosol plasma membrane azurophil granule membrane specific granule membrane tertiary granule membrane integral component of membrane Biological process regulation of ion transmembrane transport positive regulation by host of viral genome replication regulation of acid-sensing ion channel activity protein homooligomerization positive regulation of viral process positive regulation of protein targeting to membrane neutrophil degranulation Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 2040 13830 Ensembl ENSG00000148175 ENSMUSG00000026880 UniProt P27105 P54116 RefSeq (mRNA) NM_001270526 NM_001270527 NM_004099 NM_198194 NM_013515 RefSeq (protein) NP_001257455 NP_001257456 NP_004090 NP_937837 NP_004090.4 NP_038543 Location (UCSC) Chr 9: 121.34 – 121.37 Mb Chr 2: 35.2 – 35.23 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Stomatin also known as human erythrocyte integral membrane protein band 7 is a protein that in humans is encoded by the STOM gene. ^{[5] [6]}

Clinical significance

Stomatin is a 31 kDa integral membrane protein, named after the rare human haemolytic anaemia hereditary stomatocytosis. This gene encodes a member of a highly conserved family of integral membrane proteins. The encoded protein localizes to the cell membrane of red blood cells and other cell types, where it may regulate ion channels and transporters. Loss of localization of the encoded protein is associated with hereditary stomatocytosis, a form of hemolytic anemia. ^[6]

Function

This gene encodes a member of a highly conserved family of integral membrane proteins. The encoded protein localizes to the cell membrane of red blood cells and other cell types, where it may regulate ion channels and transporters. Loss of localization of the encoded protein is associated with hereditary stomatocytosis, a form of hemolytic anemia. ^[6]

Although the wide distribution of stomatin and its constitutive expression suggest an important role for this protein in cell biology, perhaps as a “house-keeping” component, its function remains undetermined. The massive presence of stomatin in membrane-protruding folds and extensions suggests a possible structural role for this protein in the formation of these structures and/or the anchorage to the actin cytoskeleton.

References

1. GRCh38: Ensembl release 89: ENSG00000148175 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000026880 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Hiebl-Dirschmied CM, Entler B, Glotzmann C, Maurer-Fogy I, Stratowa C, Prohaska R (Oct 1991). "Cloning and nucleotide sequence of cDNA encoding human erythrocyte band 7 integral membrane protein". Biochim Biophys Acta. 1090 (1): 123–4. doi:10.1016/0167-4781(91)90047-P. PMID   1883838.
6. "Entrez Gene: STOM stomatin".

Further reading

• Stewart GW (1997). "Stomatin". Int. J. Biochem. Cell Biol. 29 (2): 271–4. doi:10.1016/S1357-2725(96)00072-6. PMID   9147127.
• Stewart GW, Hepworth-Jones BE, Keen JN, et al. (1992). "Isolation of cDNA coding for an ubiquitous membrane protein deficient in high Na+, low K+ stomatocytic erythrocytes". Blood. 79 (6): 1593–601. doi: 10.1182/blood.V79.6.1593.1593 . PMID   1547348.
• Gallagher PG, Forget BG (1995). "Structure, organization, and expression of the human band 7.2b gene, a candidate gene for hereditary hydrocytosis". J. Biol. Chem. 270 (44): 26358–63. doi: 10.1074/jbc.270.44.26358 . PMID   7592848.
• Salzer U, Ahorn H, Prohaska R (1993). "Identification of the phosphorylation site on human erythrocyte band 7 integral membrane protein: implications for a monotopic protein structure". Biochim. Biophys. Acta. 1151 (2): 149–52. doi:10.1016/0005-2736(93)90098-K. PMID   8373790.
• Westberg JA, Entler B, Prohaska R, Schröder JP (1993). "The gene coding for erythrocyte protein band 7.2b (EPB72) is located in band q34.1 of human chromosome 9". Cytogenet. Cell Genet. 63 (4): 241–3. doi:10.1159/000133542. PMID   8500356.
• Unfried I, Entler B, Prohaska R (1997). "The organization of the gene (EPB72) encoding the human erythrocyte band 7 integral membrane protein (protein 7.2b)". Genomics. 30 (3): 521–8. doi:10.1006/geno.1995.1273. PMID   8825639.
• Snyers L, Thinès-Sempoux D, Prohaska R (1997). "Colocalization of stomatin (band 7.2b) and actin microfilaments in UAC epithelial cells". Eur. J. Cell Biol. 73 (3): 281–5. PMID   9243190.
• Mayer H, Salzer U, Breuss J, et al. (1998). "Isolation, molecular characterization, and tissue-specific expression of a novel putative G protein-coupled receptor". Biochim. Biophys. Acta. 1395 (3): 301–8. doi:10.1016/s0167-4781(97)00178-4. PMID   9512664.
• Snyers L, Umlauf E, Prohaska R (1998). "Oligomeric nature of the integral membrane protein stomatin". J. Biol. Chem. 273 (27): 17221–6. doi: 10.1074/jbc.273.27.17221 . PMID   9642292.
• Snyers L, Umlauf E, Prohaska R (1999). "Cysteine 29 is the major palmitoylation site on stomatin". FEBS Lett. 449 (2–3): 101–4. doi: 10.1016/S0014-5793(99)00417-2 . PMID   10338112. S2CID   19587098.
• Zhang JZ, Hayashi H, Ebina Y, et al. (1999). "Association of stomatin (band 7.2b) with Glut1 glucose transporter". Arch. Biochem. Biophys. 372 (1): 173–8. doi:10.1006/abbi.1999.1489. PMID   10562431.
• Mairhofer M, Steiner M, Mosgoeller W, et al. (2002). "Stomatin is a major lipid-raft component of platelet alpha granules". Blood. 100 (3): 897–904. doi: 10.1182/blood.V100.3.897 . PMID   12130500.
• Feuk-Lagerstedt E, Samuelsson M, Mosgoeller W, et al. (2002). "The presence of stomatin in detergent-insoluble domains of neutrophil granule membranes". J. Leukoc. Biol. 72 (5): 970–7. doi: 10.1189/jlb.72.5.970 . PMID   12429719. S2CID   6637319.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi: 10.1073/pnas.242603899 . PMC   139241 . PMID   12477932.
• Basrur V, Yang F, Kushimoto T, et al. (2003). "Proteomic analysis of early melanosomes: identification of novel melanosomal proteins". J. Proteome Res. 2 (1): 69–79. doi:10.1021/pr025562r. PMID   12643545.
• Fricke B, Argent AC, Chetty MC, et al. (2003). "The "stomatin" gene and protein in overhydrated hereditary stomatocytosis". Blood. 102 (6): 2268–77. doi: 10.1182/blood-2002-06-1705 . PMID   12750157.
• Green JB, Fricke B, Chetty MC, et al. (2005). "Eukaryotic and prokaryotic stomatins: the proteolytic link". Blood Cells Mol. Dis. 32 (3): 411–22. doi:10.1016/j.bcmd.2004.01.016. PMID   15121101.
• Humphray SJ, Oliver K, Hunt AR, et al. (2004). "DNA sequence and analysis of human chromosome 9". Nature. 429 (6990): 369–74. Bibcode:2004Natur.429..369H. doi:10.1038/nature02465. PMC   2734081 . PMID   15164053.

External links

• Overview of all the structural information available in the PDB for UniProt : P54116 (Mouse Erythrocyte band 7 integral membrane protein) at the PDBe-KB .

This article incorporates text from the United States National Library of Medicine, which is in the public domain.