TCF19

TCF19
Identifiers
Aliases	TCF19 , SC1, TCF-19, transcription factor 19
External IDs	OMIM: 600912; MGI: 103180; HomoloGene: 5156; GeneCards: TCF19; OMA:TCF19 - orthologs
Gene location (Human) Chr. Chromosome 6 (human) [1] Band 6p21.33 Start 31,158,547 bp [1] End 31,167,159 bp [1]
Gene location (Mouse) Chr. Chromosome 17 (mouse) [2] Band 17|17 B1 Start 35,823,631 bp [2] End 35,827,721 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in gonad ventricular zone lymph node ganglionic eminence mucosa of transverse colon bone marrow appendix stromal cell of endometrium mucosa of esophagus bone marrow cells Top expressed in bone marrow thymus ventricular zone genital tubercle stomach yolk sac lip intestine duodenum neural tube More reference expression data BioGPS n/a
Gene ontology Molecular function DNA-binding transcription factor activity metal ion binding protein binding Cellular component nucleus Biological process transcription, DNA-templated regulation of transcription by RNA polymerase II cell population proliferation regulation of transcription, DNA-templated Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 6941 106795 Ensembl ENSG00000233890 ENSG00000224472 ENSG00000137310 ENSG00000224941 ENSG00000234674 ENSG00000206455 ENSG00000224379 ENSMUSG00000050410 UniProt Q9Y242 Q99KJ5 RefSeq (mRNA) NM_001077511 NM_007109 NM_001318908 NM_001163763 NM_001163764 NM_025674 RefSeq (protein) NP_001070979 NP_001305837 NP_009040 NP_001157235 NP_001157236 NP_079950 Location (UCSC) Chr 6: 31.16 – 31.17 Mb Chr 17: 35.82 – 35.83 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Transcription factor 19 is a protein that in humans is encoded by the TCF19 gene. ^{[5] [6] [7]}

References

1. ENSG00000224472, ENSG00000137310, ENSG00000224941, ENSG00000234674, ENSG00000206455, ENSG00000224379 GRCh38: Ensembl release 89: ENSG00000233890, ENSG00000224472, ENSG00000137310, ENSG00000224941, ENSG00000234674, ENSG00000206455, ENSG00000224379 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000050410 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Ku DH, Chang CD, Koniecki J, Cannizzaro LA, Boghosian-Sell L, Alder H, Baserga R (Sep 1991). "A new growth-regulated complementary DNA with the sequence of a putative trans-activating factor". Cell Growth Differ. 2 (4): 179–86. PMID   1868030.
6. Krishnan BR, Jamry I, Chaplin DD (Apr 1996). "Feature mapping of the HLA class I region: localization of the POU5F1 and TCF19 genes". Genomics. 30 (1): 53–8. doi:10.1006/geno.1995.0008. PMID   8595903.
7. "Entrez Gene: TCF19 transcription factor 19 (SC1)".

Further reading

• Teraoka Y, Naruse TK, Oka A, et al. (2000). "Genetic polymorphisms in the cell growth regulated gene, SC1 telomeric of the HLA-C gene and lack of association of psoriasis vulgaris". Tissue Antigens. 55 (3): 206–11. doi:10.1034/j.1399-0039.2000.550303.x. PMID   10777095.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi: 10.1073/pnas.242603899 . PMC   139241 . PMID   12477932.
• Mungall AJ, Palmer SA, Sims SK, et al. (2003). "The DNA sequence and analysis of human chromosome 6". Nature. 425 (6960): 805–11. Bibcode:2003Natur.425..805M. doi: 10.1038/nature02055 . PMID   14574404.
• Suzuki Y, Yamashita R, Shirota M, et al. (2004). "Sequence Comparison of Human and Mouse Genes Reveals a Homologous Block Structure in the Promoter Regions". Genome Res. 14 (9): 1711–8. doi:10.1101/gr.2435604. PMC   515316 . PMID   15342556.
• Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC   528928 . PMID   15489334.
• Kimura K, Wakamatsu A, Suzuki Y, et al. (2006). "Diversification of transcriptional modulation: Large-scale identification and characterization of putative alternative promoters of human genes". Genome Res. 16 (1): 55–65. doi:10.1101/gr.4039406. PMC   1356129 . PMID   16344560.
• Shiina T, Ota M, Shimizu S, et al. (2006). "Rapid Evolution of Major Histocompatibility Complex Class I Genes in Primates Generates New Disease Alleles in Humans via Hitchhiking Diversity". Genetics. 173 (3): 1555–70. doi:10.1534/genetics.106.057034. PMC   1526686 . PMID   16702430.