Chromosome 6

Last updated
Chromosome 6
Human male karyotpe high resolution - Chromosome 6 cropped.png
Human chromosome 6 pair after G-banding.
One is from mother, one is from father.
Human male karyotpe high resolution - Chromosome 6.png
Chromosome 6 pair
in human male karyogram.
Features
Length (bp)172,126,628 bp
(CHM13)
No. of genes 996 (CCDS) [1]
Type Autosome
Centromere position Submetacentric [2]
(59.8 Mbp [3] )
Complete gene lists
CCDS Gene list
HGNC Gene list
UniProt Gene list
NCBI Gene list
External map viewers
Ensembl Chromosome 6
Entrez Chromosome 6
NCBI Chromosome 6
UCSC Chromosome 6
Full DNA sequences
RefSeq NC_000006 (FASTA)
GenBank CM000668 (FASTA)

Chromosome 6 is one of the 23 pairs of chromosomes in humans. People normally have two copies of this chromosome. Chromosome 6 spans nearly 171 million base pairs (the building material of DNA) and represents between 5.5 and 6% of the total DNA in cells. It contains the major histocompatibility complex, which contains over 100 genes related to the immune response, and plays a vital role in organ transplantation.

Contents

The evolution of human centromere 6

The centromere of chromosome 6 illustrates an interesting example of centromere evolution. It was known[ further explanation needed ] that in a Catarrhini ancestor the chromosome 6 centromere was situated near position 26 Mb of the modern human chromosome. In Macaca mulatta, this old centromere went defunct and repositioned to a different chromosomal location[ relevant? ]. In the case of humans, the old centromere went defunct and a more recent form emerged near the modern position of human cen6 (size of 60 Mb). Such cases are known as Evolutionary New Centromeres (ENC). This assembly phenomenon of the human chromosome 6 gives researchers an opportunity to investigate the origin of the ENC on chromosome 6. [4]

Genes

The human leukocyte antigen lies on chromosome 6, with the exception of the gene for β2-microglobulin (which is located on chromosome 15), and encodes cell-surface antigen-presenting proteins among other functions.

Number of genes

In 2003, the entirety of chromosome 6 was manually annotated for proteins, resulting in the identification of 1,557 genes, and 633 pseudogenes. [5]

The following are some of the newer gene count estimates. Because researchers use different approaches to genome annotation their predictions of the number of genes on each chromosome varies (for technical details, see gene prediction). Among various projects, the collaborative consensus coding sequence project (CCDS) takes an extremely conservative strategy. So CCDS's gene number prediction represents a lower bound on the total number of human protein-coding genes. [6]

Estimated by Protein-coding genes Non-coding RNA genes Pseudogenes SourceRelease date
CCDS 996 [1] 2016-09-08
HGNC 1,007422736 [7] 2017-05-12
Ensembl 1,038985800 [8] 2017-03-29
UniProt 1,111 [9] 2018-02-28
NCBI 1,0531,188911 [10] [11] [12] 2017-05-19

Gene list

The following is a partial list of genes on human chromosome 6. For complete list, see the link in the infobox on the right.

p-arm

The following are some of the genes located on p-arm (short arm) of human chromosome 6:

  • ADTRP: encoding protein Androgen-dependent TFPI-regulating protein
  • APOM: encoding protein Apolipoprotein M (6p21.33)
  • ARMC12: encoding protein Armadillo repeat containing 12
  • ATXN1: encoding protein Ataxin 1 (6p16.3-p16.76)
  • TSBP1: encoding protein TSBP1 (6p21.32)
  • C6orf62: chromosome 6 open reading frame 62 (6p22.3)
  • C6orf89: chromosome 6 open reading frame 89 (6p21.2)
  • CDKAL1: CDK5 regulatory subunit associated protein 1 like 1 (6p22.3)
  • COL11A2: collagen, type XI, alpha 2(6p21.3)
  • CRIP3: encoding protein Cysteine rich protein 3
  • CYP21A2: cytochrome P450, family 21, subfamily A, polypeptide 2 (6p21.33)
  • DHX16: DEAH-box helicase 16 (6p21.33)
  • DOM3Z: Decapping exoribonuclease (6p21.33)
  • DSP: Desmoplakin gene linked to cardiomyopathy (6p24.3)
  • ELOVL5: ELOVL fatty acid elongase 5 (6p12.1)
  • FBXO9: F-box protein 9 (6p12.1)
  • FOXP4-AS1: encoding protein FOXP4 antisense RNA 1
  • FTH1P5: encoding protein Ferritin, heavy polypeptide 1 pseudogene 5
  • G6B: Protein G6b (6p21.33)
  • GCNT2: N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase (6p24.3)
  • GGNBP1: encoding protein Gametogenetin binding protein 1 (pseudogene)
  • GMDS: GDP-mannose 4,6-dehydratase (6p25.3)
  • GTPBP2: encoding protein Gtp binding protein 2
  • HCG4P11: HLA complex group 4 pseudogene 11
  • HFE: hemochromatosis (6p22.2)
  • HIST1H2AH: histone cluster 1 H2A family member h (6p22.1)
  • HLA-A, HLA-B, HLA-C: major histocompatibility complex (MHC), class I, A, B, and C loci. (6p21.3)
  • HLA-DQA1 and HLA-DQB1 form HLA-DQ heterodimer MHC class II, DQ: Celiac1, IDDM (6p21.3)
  • HLA-DRA, HLA-DRB1, HLA-DRB3, HLA-DRB4, HLA-DRB5 forms HLA-DR, heterodimer MHC class II, DR (6p21.3) Mold / Biotoxin Susceptibility
  • HLA-DPA1 and HLA-DPB1 forms HLA-DP, MHC class II, DP (6p21.3)
  • HLA-Cw*06:02: gene variation related to psoriasis (6p21.3)
  • KAAG1: encoding protein Kidney associated antigen 1
  • LOC100533655: encoding protein Aryl hydrocarbon receptor pseudogene
  • LST1: leukocyte specific transcript 1 (6p21.33)
  • LY6G6E encoding protein Lymphocyte antigen 6 complex, locus G6E (pseudogene) (6p21.33)
  • MIR4640: microRNA 4640 (6p21.33)
  • MLIP: muscular LMNA interaction protein (6p12.1)
  • MRPS18B: mitochondrial ribosomal protein S18B (6p21.33)
  • MUT: methylmalonyl Coenzyme A mutase (6p12.3)
  • NHLRC1: NHL repeat containing E3 ubiquitin protein ligase 1 (6p22.3)
  • NOL7: nucleolar protein 7 (6p23)
  • NQO2: N-ribosyldihydronicotinamide:quinone reductase 2 (6p25.2)
  • NRSN1: neurensin 1 (6p22.3)
  • NUDT3: nudix hydrolase 3 (6p21.31)
  • PFDN6: prefoldin subunit 6 (6p21.32)
  • PHACTR1: phosphatase and actin regulator 1 (6p24.1)
  • PKHD1: polycystic kidney and hepatic disease 1 (autosomal recessive) (6p21.2-p12)
  • PRICKLE4: prickle planar cell polarity protein 4 (6p21.1)
  • PRSS16: protease, serine 16 (6p22.1)
  • PSMB8-AS1: PSMB8 antisense RNA 1 (head to head) (6p21.32)
  • RAB44: encoding protein Rab44, member ras oncogene family
  • RIPOR2: RHO family interacting cell polarization regulator 2 (6p22.3)
  • RPL10A: encoding protein 60S ribosomal protein L10a (6p21.31)
  • SKIV2L: Ski2 like RNA helicase (6p21.33)
  • SSR1: signal sequence receptor subunit 1 (6p24.3)
  • TCF19: transcription factor 19 (6p21.33)
  • TCP11: t-complex 11 (6p21.31)
  • TJAP1: tight junction associated protein 1 (6p21.1)
  • TP53COR1 encoding protein Tumor protein p53 pathway corepressor 1 (non-protein coding)
  • TMEM151B: encoding protein Transmembrane protein 151B
  • TNXB: tenascin XB (6p21.3)
  • TRAM2: translocation associated membrane protein 2 (6p12.2)
  • TRIM38: encoding protein Tripartite motif containing 38
  • TTBK1: encoding protein Tau tubulin kinase 1
  • UBR2: ubiquitin protein ligase E3 component n-recognin 2 (6p21.2)
  • UNC5CL: encoding protein Unc-5 homolog C (C. elegans)-like
  • USP8P1: encoding protein Ubiquitin specific peptidase 8 pseudogene 1
  • VEGF: vascular endothelial growth factor A (angiogenic growth factor) (6p21.1)
  • VPS52: GARP complex subunit
  • VWA7: encoding protein Von willebrand factor a domain containing 7
  • ZKSCAN4: encoding protein zinc finger with KRAB and SCAN domains 4
  • ZNF76: zinc finger protein 76 (6p21.31)
  • ZNF193: zinc finger protein 193 (6p22.1)
  • ZNRD1: zinc ribbon domain containing 1 (6p22.1)

q-arm

The following are some of the genes located on q-arm (long arm) of human chromosome 6:

  • AIM1: encoding protein Absent in melanoma 1 protein (6q21)
  • AIG1: encoding protein Androgen-induced protein 1 (6q24.2)
  • AKIRIN2: akirin 2 (6q15)
  • ARG1: arginase 1 (6q23.2)
  • BCKDHB: branched-chain keto acid dehydrogenase E1, beta polypeptide (maple syrup urine disease) (6q14.1)
  • BMIQ3: body mass index QTL 3
  • TMEM242 encoding transmembrane protein TMEM242
  • C6orf203: encoding protein Chromosome 6 open reading frame 203
  • C6orf58: chromosome 6 open reading frame 58 (6q22.33)
  • CFAP206: encoding protein Cilia And Flagella Associated Protein 206
  • CMD1F: cardiomyopathy, dilated 1F
  • CMD1K: cardiomyopathy, dilated 1K
  • CNR1: cannabinoid 1 receptor (6q14-q15) [13]
  • DACT2: encoding protein Dishevelled binding antagonist of beta catenin 2
  • DFNB38: deafness, autosomal recessive 38
  • DYX4: dyslexia susceptibility 4
  • ECT2L: encoding protein Epithelial cell transforming sequence 2 oncogene-like
  • ESR1: Estrogen receptor 1 (6q25)
  • EYA4: eyes absent homolog 4 (Drosophila)(6q23.2)
  • FBXL4: F-box and leucine rich repeat protein 4 (6q16.1-q16.2)
  • FEB5: febrile convulsions 5
  • HACE1: HECT domain and Ankyrin repeat containing, E3 ubiquitin protein ligase 1 (6q21)
  • HEBP2: heme binding protein 2 (6q24.1)
  • IDDM8: insulin dependent diabetes mellitus 8
  • IDDM15: insulin dependent diabetes mellitus 15
  • IFNGR: interferon-γ receptor gene (6q23-q24)
  • IGF2R: insulin-like growth factor 2 receptor (6q25.3)
  • IMPG1: interphotoreceptor matrix proteoglylcan 1 (6q14.1)
  • KIAA0408
  • LGSN: encoding protein lengsin
  • LIN28B: lin-28 homolog B (6q16.3-q21)
  • MAN1A1: mannosidase alpha class 1A member 1 (6q22.31)
  • MB21D1: encoding protein Mab-21 domain containing 1
  • MCDR1: macular dystrophy, retinal, 1
  • MDN1: midasin AAA ATPase 1 (6q15)
  • MOXD1: monooxygenase DBH like 1 (6q23.2)
  • MTO1: mitochondrial tRNA translation optimization 1 (6q13)
  • MRT18: mental retardation, non-syndromic, autosomal recessive
  • MRT28: mental retardation, non-syndromic, autosomal recessive
  • MTRF1L: mitochondrial translational release factor 1 like (6q25.2)
  • MYO6: myosin VI (6q14.1)
  • NHEG1: encoding protein Neuroblastoma highly expressed 1
  • OA3: ocular albinism 3
  • OPRM1: μ-opioid receptors (6q24-q25)
  • OTSC7: otosclerosis 7
  • PLG: plasminogen (6q26)
  • PBCRA1
  • PARK2: Parkinson disease (autosomal recessive, juvenile) 2, parkin (6q26)
  • PCMT1: protein-L-isoaspartate (D-aspartate) O-methyltransferase (6q25.1)
  • PERP: p53 apoptosis effector related to PMP-22 (6q23.3)
  • PKIB: cAMP-dependent protein kinase inhibitor beta (6p22.31)
  • PLAGL1: (6q24.2)
  • QRSL1: encoding protein Glutaminyl-trna synthase (glutamine-hydrolyzing)-like 1
  • RCD1: retinal cone dystrophy 1
  • RFPL4B: Ret finger protein like 4B
  • RP63: retinitis pigmentosa 63
  • SASH1: SAM and SH3 domain containing 1 (6q24.3-q25.1)
  • SCZD5: schizophrenia disorder 5
  • SEN6: senescence (cellular)-related 6
  • SENP6: SUMO1/sentrin specific peptidase 6 (6q14.1)
  • SERAC1: serine active site containing 1 (6q25.3)
  • SERINC1: serine incorporator 1 (6q22.31)
  • SF3B5: splicing factor 3b subunit 5 (6q24.2)
  • SMAP1: small ArfGAP 1 (6q13)
  • SOBP: sine oculis binding protein homolog (6q21)
  • SPG25: spastic paraplegia 25
  • ST8: suppression of tumorigenicity 8
  • SYNJ2: synaptojanin 2 (6q25.3)
  • T: T brachyury transcription factor (more commonly known as the T gene) linked to Hepatocellular carcinoma and Chordoma (6q27) [14]
  • TAAR1: trace amine associated receptor 1 (6q23.1)
  • TAAR2: trace amine associated receptor 2 (6q24)
  • TMEM200A: encoding protein Transmembrane protein 200A
  • TSPYL1: TSPY like 1 (6q22.1)
  • UNC93A: encoding protein Unc-93 homolog A (C. elegans)
  • VNN1: vanin 1 (6q23.2)
  • VNN2: vanin 2 (6q23.2)
  • VTA1: Vesicle trafficking 1 (6q24.1-2)
  • ZC2HC1: encoding protein Zinc finger C2HC-type containing 1B
  • ZDHHC14: encoding protein Zinc finger, DHHC-type containing 14

Diseases and disorders

The following diseases are some of those related to genes on chromosome 6:

Cytogenetic band

G-banding ideograms of human chromosome 6
Human chromosome 6 ideogram vertical.svg
G-banding ideogram of human chromosome 6 in resolution 850 bphs. Band length in this diagram is proportional to base-pair length. This type of ideogram is generally used in genome browsers (e.g. Ensembl, UCSC Genome Browser).
Human chromosome 06 - 400 550 850 bphs.png
G-banding patterns of human chromosome 6 in three different resolutions (400, [15] 550 [16] and 850 [3] ). Band length in this diagram is based on the ideograms from ISCN (2013). [17] This type of ideogram represents actual relative band length observed under a microscope at the different moments during the mitotic process. [18]
G-bands of human chromosome 6 in resolution 850 bphs [19]
Chr.Arm [20] Band [21] ISCN
start [22]
ISCN
stop [22]
Basepair
start
Basepair
stop
Stain [23] Density
6p25.3011812,300,000gneg
6p25.21182072,300,0014,200,000gpos25
6p25.12073554,200,0017,100,000gneg
6p24.33555487,100,00110,600,000gpos50
6p24.254859210,600,00111,600,000gneg
6p24.159274011,600,00113,400,000gpos25
6p2374084413,400,00115,200,000gneg
6p22.3844118515,200,00125,200,000gpos75
6p22.21185134825,200,00127,100,000gneg
6p22.11348158527,100,00130,500,000gpos50
6p21.331585171830,500,00132,100,000gneg
6p21.321718183632,100,00133,500,000gpos25
6p21.311836216233,500,00136,600,000gneg
6p21.22162231036,600,00140,500,000gpos25
6p21.12310275540,500,00146,200,000gneg
6p12.32755308046,200,00151,800,000gpos100
6p12.23080314051,800,00153,000,000gneg
6p12.1314033775,300,000157,200,000gpos100
6p11.23377342157,200,00158,500,000gneg
6p11.13421355458,500,00159,800,000acen
6q11.13554365859,800,00162,600,000acen
6q11.23658373262,600,00162,700,000gneg
6q123732414762,700,00169,200,000gpos100
6q134147432469,200,00175,200,000gneg
6q14.14324462175,200,00183,200,000gpos50
6q14.24621470983,200,00184,200,000gneg
6q14.34709491784,200,00187,300,000gpos50
6q154917522887,300,00192,500,000gneg
6q16.15228561392,500,00198,900,000gpos100
6q16.25613568798,900,001100,000,000gneg
6q16.35687598310,000,0001105,000,000gpos100
6q215983653110,500,0001114,200,000gneg
6q22.165316753114,200,001117,900,000gpos75
6q22.267536872117,900,001118,100,000gneg
6q22.3168727168118,100,001125,800,000gpos100
6q22.3271687345125,800,001126,800,000gneg
6q22.3373457642126,800,001130,000,000gpos75
6q23.17642792313,000,0001130,900,000gneg
6q23.279238145130,900,001134,700,000gpos50
6q23.381458352134,700,001138,300,000gneg
6q24.183528560138,300,001142,200,000gpos75
6q24.285608708142,200,001145,100,000gneg
6q24.387088886145,100,001148,500,000gpos75
6q25.188869078148,500,001152,100,000gneg
6q25.290789241152,100,001155,200,000gpos50
6q25.392419596155,200,001160,600,000gneg
6q2695969774160,600,001164,100,000gpos50
6q27977410100164,100,001170,805,979gneg

Related Research Articles

<span class="mw-page-title-main">Chromosome 21</span> Human chromosome

Chromosome 21 is one of the 23 pairs of chromosomes in humans. Chromosome 21 is both the smallest human autosome and chromosome, with 46.7 million base pairs representing about 1.5 percent of the total DNA in cells. Most people have two copies of chromosome 21, while those with three copies of chromosome 21 have Down syndrome.

<span class="mw-page-title-main">Chromosome 1</span> Human chromosome

Chromosome 1 is the designation for the largest human chromosome. Humans have two copies of chromosome 1, as they do with all of the autosomes, which are the non-sex chromosomes. Chromosome 1 spans about 249 million nucleotide base pairs, which are the basic units of information for DNA. It represents about 8% of the total DNA in human cells.

<span class="mw-page-title-main">Chromosome 13</span> Human chromosome

Chromosome 13 is one of the 23 pairs of chromosomes in humans. People normally have two copies of this chromosome. Chromosome 13 spans about 113 million base pairs and represents between 3.5 and 4% of the total DNA in cells.

<span class="mw-page-title-main">Chromosome 22</span> Human chromosome

Chromosome 22 is one of the 23 pairs of chromosomes in human cells. Humans normally have two copies of chromosome 22 in each cell. Chromosome 22 is the second smallest human chromosome, spanning about 51 million DNA base pairs and representing between 1.5 and 2% of the total DNA in cells.

<span class="mw-page-title-main">Chromosome 2</span> Human chromosome

Chromosome 2 is one of the twenty-three pairs of chromosomes in humans. People normally have two copies of this chromosome. Chromosome 2 is the second-largest human chromosome, spanning more than 242 million base pairs and representing almost eight percent of the total DNA in human cells.

<span class="mw-page-title-main">Chromosome 3</span> Human chromosome

Chromosome 3 is one of the 23 pairs of chromosomes in humans. People normally have two copies of this chromosome. Chromosome 3 spans more than 198 million base pairs and represents about 6.5 percent of the total DNA in cells.

<span class="mw-page-title-main">Chromosome 4</span> Human chromosome

Chromosome 4 is one of the 23 pairs of chromosomes in humans. People normally have two copies of this chromosome. Chromosome 4 spans more than 190 million base pairs and represents between 6 and 6.5 percent of the total DNA in cells.

<span class="mw-page-title-main">Chromosome 5</span> Human chromosome

Chromosome 5 is one of the 23 pairs of chromosomes in humans. People normally have two copies of this chromosome. Chromosome 5 spans about 182 million base pairs and represents almost 6% of the total DNA in cells. Chromosome 5 is the 5th largest human chromosome, yet has one of the lowest gene densities. This is partially explained by numerous gene-poor regions that display a remarkable degree of non-coding and syntenic conservation with non-mammalian vertebrates, suggesting they are functionally constrained.

<span class="mw-page-title-main">Chromosome 8</span> Human chromosome

Chromosome 8 is one of the 23 pairs of chromosomes in humans. People normally have two copies of this chromosome. Chromosome 8 spans about 146 million base pairs and represents between 4.5 and 5.0% of the total DNA in cells.

<span class="mw-page-title-main">Chromosome 9</span> Human chromosome

Chromosome 9 is one of the 23 pairs of chromosomes in humans. Humans normally have two copies of this chromosome, as they normally do with all chromosomes. Chromosome 9 spans about 138 million base pairs of nucleic acids and represents between 4.0 and 4.5% of the total DNA in cells.

<span class="mw-page-title-main">Chromosome 10</span> Human chromosome

Chromosome 10 is one of the 23 pairs of chromosomes in humans. People normally have two copies of this chromosome. Chromosome 10 spans about 134 million base pairs and represents between 4 and 4.5 percent of the total DNA in cells.

<span class="mw-page-title-main">Chromosome 11</span> Human chromosome

Chromosome 11 is one of the 23 pairs of chromosomes in humans. Humans normally have two copies of this chromosome. Chromosome 11 spans about 135 million base pairs and represents between 4 and 4.5 percent of the total DNA in cells. The shorter arm is termed 11p while the longer arm is 11q. At about 21.5 genes per megabase, chromosome 11 is one of the most gene-rich, and disease-rich, chromosomes in the human genome.

<span class="mw-page-title-main">Chromosome 12</span> Human chromosome

Chromosome 12 is one of the 23 pairs of chromosomes in humans. People normally have two copies of this chromosome. Chromosome 12 spans about 133 million base pairs and represents between 4 and 4.5 percent of the total DNA in cells.

<span class="mw-page-title-main">Chromosome 14</span> Human chromosome

Chromosome 14 is one of the 23 pairs of chromosomes in humans. People normally have two copies of this chromosome. Chromosome 14 spans about 107 million base pairs and represents between 3 and 3.5% of the total DNA in cells.

<span class="mw-page-title-main">Chromosome 15</span> Human chromosome

Chromosome 15 is one of the 23 pairs of chromosomes in humans. People normally have two copies of this chromosome. Chromosome 15 spans about 99.7 million base pairs and represents between 3% and 3.5% of the total DNA in cells. Chromosome 15 is an acrocentric chromosome, with a very small short arm, which contains few protein coding genes among its 19 million base pairs. It has a larger long arm that is gene rich, spanning about 83 million base pairs.

<span class="mw-page-title-main">Chromosome 16</span> Human chromosome

Chromosome 16 is one of the 23 pairs of chromosomes in humans. People normally have two copies of this chromosome. Chromosome 16 spans about 90 million base pairs and represents just under 3% of the total DNA in cells.

<span class="mw-page-title-main">Chromosome 17</span> Human chromosome

Chromosome 17 is one of the 23 pairs of chromosomes in humans. People normally have two copies of this chromosome. Chromosome 17 spans more than 84 million base pairs and represents between 2.5 and 3% of the total DNA in cells.

<span class="mw-page-title-main">Chromosome 18</span> Human chromosome

Chromosome 18 is one of the 23 pairs of chromosomes in humans. People normally have two copies of this chromosome. Chromosome 18 spans about 80 million base pairs and represents about 2.5 percent of the total DNA in cells.

<span class="mw-page-title-main">Chromosome 19</span> Human chromosome

Chromosome 19 is one of the 23 pairs of chromosomes in humans. People normally have two copies of this chromosome. Chromosome 19 spans more than 61.7 million base pairs, the building material of DNA. It is considered the most gene-rich chromosome containing roughly 1,500 genes, despite accounting for only 2 percent of the human genome.

<span class="mw-page-title-main">Chromosome 20</span> Human chromosome

Chromosome 20 is one of the 23 pairs of chromosomes in humans. Chromosome 20 spans around 66 million base pairs and represents between 2 and 2.5 percent of the total DNA in cells. Chromosome 20 was fully sequenced in 2001 and was reported to contain over 59 million base pairs. Since then, due to sequencing improvements and fixes, the length of chromosome 20 has been updated to just over 66 million base pairs.

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  14. "T brachyury transcription factor". T - T brachyury transcription factor - Genetics Home Reference.
  15. Genome Decoration Page, NCBI. Ideogram data for Homo sapience (400 bphs, Assembly GRCh38.p3). Last update 2014-03-04. Retrieved 2017-04-26.
  16. Genome Decoration Page, NCBI. Ideogram data for Homo sapience (550 bphs, Assembly GRCh38.p3). Last update 2015-08-11. Retrieved 2017-04-26.
  17. International Standing Committee on Human Cytogenetic Nomenclature (2013). ISCN 2013: An International System for Human Cytogenetic Nomenclature (2013). Karger Medical and Scientific Publishers. ISBN   978-3-318-02253-7.
  18. Sethakulvichai, W.; Manitpornsut, S.; Wiboonrat, M.; Lilakiatsakun, W.; Assawamakin, A.; Tongsima, S. (2012). "Estimation of band level resolutions of human chromosome images". 2012 Ninth International Conference on Computer Science and Software Engineering (JCSSE). pp. 276–282. doi:10.1109/JCSSE.2012.6261965. ISBN   978-1-4673-1921-8. S2CID   16666470.
  19. Genome Decoration Page, NCBI. Ideogram data for Homo sapience (850 bphs, Assembly GRCh38.p3). Last update 2014-06-03. Retrieved 2017-04-26.
  20. "p": Short arm; "q": Long arm.
  21. For cytogenetic banding nomenclature, see article locus.
  22. 1 2 These values (ISCN start/stop) are based on the length of bands/ideograms from the ISCN book, An International System for Human Cytogenetic Nomenclature (2013). Arbitrary unit.
  23. gpos: Region which is positively stained by G banding, generally AT-rich and gene poor; gneg: Region which is negatively stained by G banding, generally CG-rich and gene rich; acen Centromere. var: Variable region; stalk: Stalk.
Notes

Further reading