TRIM38

TRIM38
Identifiers
Aliases	TRIM38 , RNF15, RORET, tripartite motif containing 38
External IDs	MGI: 2684869 HomoloGene: 48427 GeneCards: TRIM38
Gene location (Human)
Chr.	Chromosome 6 (human)
End	25,991,231 bp
Gene location (Mouse)
Chr.	Chromosome 13 (mouse)
End	23,975,511 bp
RNA expression pattern
	Top expressed in
	cardia; ; renal medulla; ; pylorus; ; nipple; ; superior surface of tongue; ; ventral tegmental area; ; external globus pallidus; ; vena cava; ; trigeminal ganglion; ; inferior ganglion of vagus nerve;
	Top expressed in
	morula; ; blastocyst; ; jejunum; ; duodenum; ; colon; ; secondary oocyte; ; spermatid; ; testicle; ; ileum; ; quadriceps femoris muscle;
	More reference expression data
	n/a
Gene ontology
Molecular function	zinc ion binding ; signal transducer activity ; metal ion binding ; protein binding ; transferase activity ;
Cellular component	cytosol ; intracellular anatomical structure ;
Biological process	immune system process ; interferon-gamma-mediated signaling pathway ; positive regulation of DNA-binding transcription factor activity ; positive regulation of NF-kappaB transcription factor activity ; protein ubiquitination ; positive regulation of I-kappaB kinase/NF-kappaB signaling ; innate immune response ;
	Sources:Amigo / QuickGO
Orthologs
	10475
	214158
	ENSG00000112343
	ENSMUSG00000064140
	O00635
	Q5SZ99
	NM_006355
	NM_001029935
	NP_006346
	NP_001025106
	Wikidata
View/Edit Human	View/Edit Mouse

Last updated August 24, 2022

Tripartite motif containing 38 is a protein that in humans is encoded by the TRIM38 gene. ^[5]

Function

This gene encodes a member of the tripartite motif (TRIM) family. The encoded protein contains a RING-type zinc finger, B box-type zinc finger and SPRY domain. The function of this protein has not been identified. A pseudogene of this gene is located on the long arm of chromosome 4. [provided by RefSeq, Jul 2012].

Related Research Articles

Tripartite motif-containing protein 5 also known as RING finger protein 88 is a protein that in humans is encoded by the TRIM5 gene. The alpha isoform of this protein, TRIM5α, is a retrovirus restriction factor, which mediates species-specific, early block to retrovirus infection.

Tripartite motif-containing protein 21, also known as E3 ubiquitin-protein ligase TRIM21, is a protein that in humans is encoded by the TRIM21 gene. Alternatively spliced transcript variants for this gene have been described but the full-length nature of only one has been determined. It is expressed in most human tissues.

AT-rich interactive domain-containing protein 2 (ARID2) is a protein that in humans is encoded by the ARID2 gene.

Midline-2 is a protein that in humans is encoded by the MID2 gene.

Tripartite motif-containing 22, also known as TRIM22, is a protein which in humans is encoded by the TRIM22 gene.

Zinc finger protein 24 is a protein that in humans is encoded by the ZNF24 gene.

Tripartite motif-containing 33 (TRIM33) also known as transcriptional intermediary factor 1 gamma (TIF1-γ), is a human gene.

Tripartite motif-containing protein 3 is a protein that in humans is encoded by the TRIM3 gene.

Tripartite motif-containing protein 9 is a protein that in humans is encoded by the TRIM9 gene.

Tripartite motif-containing protein 55 is a protein that in humans is encoded by the TRIM55 gene.

Tripartite motif-containing protein 6 is a protein that in humans is encoded by the TRIM6 gene.

PHD finger protein 1 is a protein that in humans is encoded by the PHF1 gene.

Tripartite motif-containing protein 11 is a protein found in humans that is encoded by the TRIM11 gene.

Tripartite motif-containing protein 15 is a protein that in humans is encoded by the TRIM15 gene.

Zing finger protein 644 (ZNF644) also known as zinc finger motif enhancer-binding protein 2 (Zep-2) is a protein that in humans is encoded by the ZNF644 gene.

Cytokine-like 1 (CYTL1) is a protein that in humans is encoded by the CYTL1 gene.

Zinc finger protein 266 is a protein that in humans is encoded by the ZNF266 gene.

Zinc finger protein 394 is a protein that in humans is encoded by the ZNF394 gene.

Zinc finger protein 510 is a protein that in humans is encoded by the ZNF510 gene.

Zinc transporter ZIP8 is a cation/bicarbonate symporter protein which in humans is encoded by the SLC39A8 gene.

References

1 2 3 GRCh38: Ensembl release 89: ENSG00000112343 - Ensembl, May 2017
1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000064140 - Ensembl, May 2017
↑ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
↑ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
↑ "Entrez Gene: Tripartite motif containing 38" . Retrieved 2018-03-21.

TRIM38

Contents

Function

Related Research Articles

References

Further reading