Centromere protein B

CENPB
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 1UFI, 1BW6, 1HLV
Identifiers
Aliases	CENPB , entrez:1059, centromere protein B
External IDs	OMIM: 117140 MGI: 88376 HomoloGene: 1370 GeneCards: CENPB
Gene location (Human) Chr. Chromosome 20 (human) [1] Band 20p13 Start 3,783,851 bp [1] End 3,786,740 bp [1]
Gene location (Mouse) Chr. Chromosome 2 (mouse) [2] Band 2 F1|2 63.29 cM Start 131,017,102 bp [2] End 131,021,987 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in amygdala gastrocnemius muscle putamen stromal cell of endometrium nipple inferior ganglion of vagus nerve nucleus accumbens caudate nucleus right coronary artery hypothalamus Top expressed in lip parotid gland superior frontal gyrus lacrimal gland extensor digitorum longus muscle intercostal muscle brown adipose tissue olfactory epithelium right lung soleus muscle More reference expression data BioGPS n/a
Orthologs Species Human Mouse Entrez 1059 12616 Ensembl ENSG00000125817 ENSMUSG00000068267 UniProt P07199 P27790 RefSeq (mRNA) NM_001810 NM_007682 RefSeq (protein) NP_001801 NP_031708 Location (UCSC) Chr 20: 3.78 – 3.79 Mb Chr 2: 131.02 – 131.02 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Centromere protein B also known as major centromere autoantigen B is an autoantigen protein of the cell nucleus. In humans, centromere protein B is encoded by the CENPB gene. ^{[5] [6] [7]}

Function

Centromere protein B is a highly conserved protein that facilitates centromere formation. It is a DNA-binding protein that is derived from transposases of the pogo DNA transposon family. It contains a helix-loop-helix DNA binding motif at the N-terminus and a dimerization domain at the C-terminus. The DNA binding domain recognizes and binds a 17-bp sequence (CENP-B box) in the centromeric alpha satellite DNA. This protein is proposed to play an important role in the assembly of specific centromere structures in interphase nuclei and on mitotic chromosomes. It is also considered a major centromere autoantigen recognized by sera from patients with anti-centromere antibodies.

Clinical significance

Centromere protein B is a potential biomarker of small-cell lung cancer. ^[8]

See also

• Centromere

References

1. GRCh38: Ensembl release 89: ENSG00000125817 - Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000068267 - Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. "Entrez Gene: centromere protein B".
6. Sugimoto K, Yata H, Himeno M (July 1993). "Mapping of the human CENP-B gene to chromosome 20 and the CENP-C gene to chromosome 12 by a rapid cycle DNA amplification procedure". Genomics. 17 (1): 240–2. doi:10.1006/geno.1993.1312. PMID   8406460.
7. Ando S, Yang H, Nozaki N, Okazaki T, Yoda K (April 2002). "CENP-A, -B, and -C chromatin complex that contains the I-type alpha-satellite array constitutes the prekinetochore in HeLa cells". Molecular and Cellular Biology. 22 (7): 2229–41. doi:10.1128/MCB.22.7.2229-2241.2002. PMC   133672 . PMID   11884609.
8. Briasoulis E, Kamposioras K, Tzovaras V, Pafitanis G, Kostoula A, Mavridis A, Pavlidis N (May 2008). "CENP-B specific anti-centromere autoantibodies heralding small-cell lung cancer. A case study and review of the literature". Lung Cancer. 60 (2): 302–6. doi:10.1016/j.lungcan.2007.09.014. PMID   17980453.

Further reading

• Saxena A, Wong LH, Kalitsis P, Earle E, Shaffer LG, Choo KH (September 2002). "Poly(ADP-ribose) polymerase 2 localizes to mammalian active centromeres and interacts with PARP-1, Cenpa, Cenpb and Bub3, but not Cenpc". Human Molecular Genetics. 11 (19): 2319–29. doi: 10.1093/hmg/11.19.2319 . PMID   12217960.
• Nousiainen M, Silljé HH, Sauer G, Nigg EA, Körner R (April 2006). "Phosphoproteome analysis of the human mitotic spindle". Proceedings of the National Academy of Sciences of the United States of America. 103 (14): 5391–6. Bibcode:2006PNAS..103.5391N. doi: 10.1073/pnas.0507066103 . PMC   1459365 . PMID   16565220.
• Orthaus S, Biskup C, Hoffmann B, Hoischen C, Ohndorf S, Benndorf K, Diekmann S (January 2008). "Assembly of the inner kinetochore proteins CENP-A and CENP-B in living human cells". ChemBioChem. 9 (1): 77–92. doi:10.1002/cbic.200700358. PMID   18072184. S2CID   37467765.
• Tawaramoto MS, Park SY, Tanaka Y, Nureki O, Kurumizaka H, Yokoyama S (December 2003). "Crystal structure of the human centromere protein B (CENP-B) dimerization domain at 1.65-A resolution". The Journal of Biological Chemistry. 278 (51): 51454–61. doi: 10.1074/jbc.M310388200 . PMID   14522975.
• Tanaka Y, Tachiwana H, Yoda K, Masumoto H, Okazaki T, Kurumizaka H, Yokoyama S (December 2005). "Human centromere protein B induces translational positioning of nucleosomes on alpha-satellite sequences". The Journal of Biological Chemistry. 280 (50): 41609–18. doi: 10.1074/jbc.M509666200 . PMID   16183641.
• Wellcome Trust Case Control Consortium; et al. (June 2007). "Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls". Nature. 447 (7145): 661–78. Bibcode:2007Natur.447..661B. doi:10.1038/nature05911. PMC   2719288 . PMID   17554300.
• Tanaka Y, Kurumizaka H, Yokoyama S (January 2005). "CpG methylation of the CENP-B box reduces human CENP-B binding". The FEBS Journal. 272 (1): 282–9. doi: 10.1111/j.1432-1033.2004.04406.x . PMID   15634350. S2CID   45738717.
• Sowa ME, Bennett EJ, Gygi SP, Harper JW (July 2009). "Defining the human deubiquitinating enzyme interaction landscape". Cell. 138 (2): 389–403. doi:10.1016/j.cell.2009.04.042. PMC   2716422 . PMID   19615732.
• Lim J, Hao T, Shaw C, Patel AJ, Szabó G, Rual JF, Fisk CJ, Li N, Smolyar A, Hill DE, Barabási AL, Vidal M, Zoghbi HY (May 2006). "A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration". Cell. 125 (4): 801–14. doi: 10.1016/j.cell.2006.03.032 . PMID   16713569. S2CID   13709685.
• Lomonte P, Morency E (February 2007). "Centromeric protein CENP-B proteasomal degradation induced by the viral protein ICP0". FEBS Letters. 581 (4): 658–62. doi:10.1016/j.febslet.2007.01.027. PMID   17258208. S2CID   27748450.
• Suzuki N, Nakano M, Nozaki N, Egashira S, Okazaki T, Masumoto H (February 2004). "CENP-B interacts with CENP-C domains containing Mif2 regions responsible for centromere localization". The Journal of Biological Chemistry. 279 (7): 5934–46. doi: 10.1074/jbc.M306477200 . PMID   14612452.
• Hellwig D, Münch S, Orthaus S, Hoischen C, Hemmerich P, Diekmann S (August 2008). "Live-cell imaging reveals sustained centromere binding of CENP-T via CENP-A and CENP-B". Journal of Biophotonics. 1 (3): 245–54. doi:10.1002/jbio.200810014. PMID   19412974. S2CID   22855465.
• Robitaille G, Hénault J, Christin MS, Senécal JL, Raymond Y (November 2007). "The nuclear autoantigen CENP-B displays cytokine-like activities toward vascular smooth muscle cells". Arthritis and Rheumatism. 56 (11): 3814–26. doi: 10.1002/art.22972 . PMID   17968937.
• Obuse C, Yang H, Nozaki N, Goto S, Okazaki T, Yoda K (February 2004). "Proteomics analysis of the centromere complex from HeLa interphase cells: UV-damaged DNA binding protein 1 (DDB-1) is a component of the CEN-complex, while BMI-1 is transiently co-localized with the centromeric region in interphase". Genes to Cells. 9 (2): 105–20. doi: 10.1111/j.1365-2443.2004.00705.x . PMID   15009096. S2CID   21813024.
• Perdoni F, Bottone MG, Soldani C, Veneroni P, Alpini C, Pellicciari C, Scovassi AI (August 2009). "Distribution of centromeric proteins and PARP-1 during mitosis and apoptosis". Annals of the New York Academy of Sciences. 1171 (1): 32–7. Bibcode:2009NYASA1171...32P. doi:10.1111/j.1749-6632.2009.04729.x. PMID   19723035. S2CID   42584743.
• Andersen JS, Lam YW, Leung AK, Ong SE, Lyon CE, Lamond AI, Mann M (January 2005). "Nucleolar proteome dynamics". Nature. 433 (7021): 77–83. Bibcode:2005Natur.433...77A. doi:10.1038/nature03207. PMID   15635413. S2CID   4344740.
• Robitaille G, Christin MS, Clément I, Senécal JL, Raymond Y (September 2009). "Nuclear autoantigen CENP-B transactivation of the epidermal growth factor receptor via chemokine receptor 3 in vascular smooth muscle cells". Arthritis and Rheumatism. 60 (9): 2805–16. doi: 10.1002/art.24765 . PMID   19714638.

External links

• Centromere+protein+B at the U.S. National Library of Medicine Medical Subject Headings (MeSH)

This article incorporates text from the United States National Library of Medicine, which is in the public domain.