UBAP2

UBAP2
Identifiers
Aliases	UBAP2 , UBAP-2, ubiquitin associated protein 2
External IDs	MGI: 1916176; HomoloGene: 73649; GeneCards: UBAP2; OMA:UBAP2 - orthologs
Gene location (Human) Chr. Chromosome 9 (human) [1] Band 9p13.3 Start 33,921,693 bp [1] End 34,048,949 bp [1]
Gene location (Mouse) Chr. Chromosome 4 (mouse) [2] Band 4|4 A5 Start 41,194,313 bp [2] End 41,275,144 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in sperm pancreatic ductal cell vastus lateralis muscle gonad Skeletal muscle tissue of biceps brachii secondary oocyte Achilles tendon Skeletal muscle tissue of rectus abdominis body of tongue sural nerve Top expressed in tail of embryo genital tubercle zygote Ileal epithelium secondary oocyte yolk sac muscle of thigh seminiferous tubule epiblast otic vesicle More reference expression data BioGPS More reference expression data
Gene ontology Molecular function RNA binding cadherin binding Cellular component nucleus cytoplasm Biological process positive regulation of gene expression Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 55833 68926 Ensembl ENSG00000137073 ENSMUSG00000028433 UniProt Q5T6F2 Q91VX2 RefSeq (mRNA) NM_020867 NM_001282529 NM_001282530 NM_018449 NM_026872 RefSeq (protein) NP_001269459 NP_060919 NP_001356988 NP_001356991 NP_001356993 NP_001356995 NP_001356996 NP_001356997 NP_081148 Location (UCSC) Chr 9: 33.92 – 34.05 Mb Chr 4: 41.19 – 41.28 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Ubiquitin-associated protein 2 is a protein that in humans is encoded by the UBAP2 gene. ^{[5] [6]}

Function

This gene is a novel gene isolated based on its expression in the human adrenal gland. The full-length protein encoded by this gene contains a UBA-domain (ubiquitin associated domain), which is a motif found in several proteins having connections to ubiquitin and the ubiquitination pathway. In addition, the protein contains a region similar to a domain found in members of the atrophin-1 family. The function of this protein has not been determined. Additional alternate splice variants may exist, but their full length nature has not been determined. ^[6]

References

1. GRCh38: Ensembl release 89: ENSG00000137073 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000028433 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Hofmann K, Bucher P (May 1996). "The UBA domain: a sequence motif present in multiple enzyme classes of the ubiquitination pathway". Trends in Biochemical Sciences. 21 (5): 172–3. doi:10.1016/S0968-0004(96)30015-7. PMID   8871400.
6. "Entrez Gene: UBAP2 ubiquitin associated protein 2".

Further reading

• Dias Neto E, Correa RG, Verjovski-Almeida S, Briones MR, Nagai MA, da Silva W, Zago MA, Bordin S, Costa FF, Goldman GH, Carvalho AF, Matsukuma A, Baia GS, Simpson DH, Brunstein A, de Oliveira PS, Bucher P, Jongeneel CV, O'Hare MJ, Soares F, Brentani RR, Reis LF, de Souza SJ, Simpson AJ (March 2000). "Shotgun sequencing of the human transcriptome with ORF expressed sequence tags". Proceedings of the National Academy of Sciences of the United States of America. 97 (7): 3491–6. Bibcode:2000PNAS...97.3491D. doi: 10.1073/pnas.97.7.3491 . PMC   16267 . PMID   10737800.
• Nagase T, Kikuno R, Ishikawa K, Hirosawa M, Ohara O (April 2000). "Prediction of the coding sequences of unidentified human genes. XVII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro". DNA Research. 7 (2): 143–50. doi: 10.1093/dnares/7.2.143 . PMID   10819331.
• Brill LM, Salomon AR, Ficarro SB, Mukherji M, Stettler-Gill M, Peters EC (May 2004). "Robust phosphoproteomic profiling of tyrosine phosphorylation sites from human T cells using immobilized metal affinity chromatography and tandem mass spectrometry". Analytical Chemistry. 76 (10): 2763–72. doi:10.1021/ac035352d. PMID   15144186.
• Rush J, Moritz A, Lee KA, Guo A, Goss VL, Spek EJ, Zhang H, Zha XM, Polakiewicz RD, Comb MJ (January 2005). "Immunoaffinity profiling of tyrosine phosphorylation in cancer cells". Nature Biotechnology. 23 (1): 94–101. doi:10.1038/nbt1046. PMID   15592455. S2CID   7200157.
• Zhang Y, Wolf-Yadlin A, Ross PL, Pappin DJ, Rush J, Lauffenburger DA, White FM (September 2005). "Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules". Molecular & Cellular Proteomics. 4 (9): 1240–50. doi: 10.1074/mcp.M500089-MCP200 . PMID   15951569.