UBXD5

UBXN11
Identifiers
Aliases	UBXN11 , COA-1, SOC, SOCI, UBXD5, PP2243, UBX domain protein 11
External IDs	OMIM: 609151 MGI: 1914836 HomoloGene: 12159 GeneCards: UBXN11
Gene location (Human)
Chr.	Chromosome 1 (human)
End	26,318,363 bp
Gene location (Mouse)
Chr.	Chromosome 4 (mouse)
End	133,854,904 bp
RNA expression pattern
	Top expressed in
	right uterine tube; ; monocyte; ; right lobe of thyroid gland; ; left lobe of thyroid gland; ; anterior pituitary; ; spleen; ; nucleus accumbens; ; right lung; ; cingulate gyrus; ; caudate nucleus;
	Top expressed in
	seminiferous tubule; ; spermatid; ; spermatocyte; ; superior frontal gyrus; ; submandibular gland; ; olfactory epithelium; ; thymus; ; paraventricular nucleus of hypothalamus; ; habenula; ; lymph node;
	More reference expression data
	n/a
Gene ontology
Molecular function	ubiquitin binding ; protein binding ;
Cellular component	cytoplasm ; cytoskeleton ;
Biological process	proteasome-mediated ubiquitin-dependent protein catabolic process ;
	Sources:Amigo / QuickGO
Orthologs
	91544
	67586
	ENSG00000158062
	ENSMUSG00000012126
	Q5T124
	Q9D572
	NM_183008 ; NM_001077262 ; NM_145345 ; NM_001389556 ; NM_001389559 Contents Function ; Interactions ; References ; Further reading ;
	NM_026257
	NP_001070730 ; NP_663320 ; NP_892120
	NP_080533
	Wikidata
View/Edit Human	View/Edit Mouse

Last updated October 18, 2022

UBX domain-containing protein 11 is a protein that in humans is encoded by the UBXN11 gene.^[5]^[6]

Function

This gene encodes a protein with a divergent C-terminal UBX domain. The homologous protein in the rat interacts with members of the Rnd subfamily of Rho GTPases at the cell periphery through its C-terminal region. It also interacts with several heterotrimeric G proteins through their G-alpha subunits and promotes Rho GTPase activation. It is proposed to serve a bidirectional role in the promotion and inhibition of Rho activity through upstream signaling pathways. The 3' coding sequence of this gene contains a polymorphic region of 24 nt tandem repeats. Several transcripts containing between 1.5 and five repeat units have been reported. Multiple transcript variants encoding different isoforms have been found for this gene.^[6]

Interactions

UBXD5 has been shown to interact with Rnd1,^[5] Rnd2 ^[5] and Rnd3.^[5]

Related Research Articles

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References

1 2 3 GRCh38: Ensembl release 89: ENSG00000158062 - Ensembl, May 2017
1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000012126 - Ensembl, May 2017
↑ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
↑ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
1 2 3 4 Katoh H, Harada A, Mori K, Negishi M (Apr 2002). "Socius is a novel Rnd GTPase-interacting protein involved in disassembly of actin stress fibers". Mol. Cell. Biol. 22 (9): 2952–64. doi:10.1128/MCB.22.9.2952-2964.2002. PMC 133765 . PMID 11940653.
1 2 "Entrez Gene: UBXD5 UBX domain containing 5".

Andersson B, Wentland MA, Ricafrente JY, Liu W, Gibbs RA (1996). "A "double adaptor" method for improved shotgun library construction". Anal. Biochem. 236 (1): 107–13. doi:10.1006/abio.1996.0138. PMID 8619474.
Yu W, Andersson B, Worley KC, Muzny DM, Ding Y, Liu W, Ricafrente JY, Wentland MA, Lennon G, Gibbs RA (1997). "Large-scale concatenation cDNA sequencing". Genome Res. 7 (4): 353–8. doi:10.1101/gr.7.4.353. PMC 139146 . PMID 9110174.
Maccalli C, Li YF, El-Gamil M, Rosenberg SA, Robbins PF (2003). "Identification of a colorectal tumor-associated antigen (COA-1) recognized by CD4(+) T lymphocytes". Cancer Res. 63 (20): 6735–43. PMC 2275323 . PMID 14583468.
Colland F, Jacq X, Trouplin V, Mougin C, Groizeleau C, Hamburger A, Meil A, Wojcik J, Legrain P, Gauthier JM (2004). "Functional proteomics mapping of a human signaling pathway". Genome Res. 14 (7): 1324–32. doi:10.1101/gr.2334104. PMC 442148 . PMID 15231748.
Rual JF, Venkatesan K, Hao T, Hirozane-Kishikawa T, Dricot A, Li N, Berriz GF, Gibbons FD, Dreze M, Ayivi-Guedehoussou N, Klitgord N, Simon C, Boxem M, Milstein S, Rosenberg J, Goldberg DS, Zhang LV, Wong SL, Franklin G, Li S, Albala JS, Lim J, Fraughton C, Llamosas E, Cevik S, Bex C, Lamesch P, Sikorski RS, Vandenhaute J, Zoghbi HY, Smolyar A, Bosak S, Sequerra R, Doucette-Stamm L, Cusick ME, Hill DE, Roth FP, Vidal M (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. Bibcode:2005Natur.437.1173R. doi:10.1038/nature04209. PMID 16189514. S2CID 4427026.
Tateiwa K, Katoh H, Negishi M (2005). "Socius, a novel binding partner of Galpha12/13, promotes the Galpha12-induced RhoA activation". Biochem. Biophys. Res. Commun. 337 (2): 615–20. doi:10.1016/j.bbrc.2005.09.097. PMID 16202387.
Kimura K, Wakamatsu A, Suzuki Y, Ota T, Nishikawa T, Yamashita R, Yamamoto J, Sekine M, Tsuritani K, Wakaguri H, Ishii S, Sugiyama T, Saito K, Isono Y, Irie R, Kushida N, Yoneyama T, Otsuka R, Kanda K, Yokoi T, Kondo H, Wagatsuma M, Murakawa K, Ishida S, Ishibashi T, Takahashi-Fujii A, Tanase T, Nagai K, Kikuchi H, Nakai K, Isogai T, Sugano S (2006). "Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes". Genome Res. 16 (1): 55–65. doi:10.1101/gr.4039406. PMC 1356129 . PMID 16344560.

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[refGRCh38Ensembl-1] 1 2 3 GRCh38: Ensembl release 89: ENSG00000158062 - Ensembl, May 2017

[refGRCm38Ensembl-2] 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000012126 - Ensembl, May 2017

[3] "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[4] "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[pmid11940653-5] 1 2 3 4 Katoh H, Harada A, Mori K, Negishi M (Apr 2002). "Socius is a novel Rnd GTPase-interacting protein involved in disassembly of actin stress fibers". Mol. Cell. Biol. 22 (9): 2952–64. doi:10.1128/MCB.22.9.2952-2964.2002. PMC 133765 . PMID 11940653.

[entrez-6] 1 2 "Entrez Gene: UBXD5 UBX domain containing 5".

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UBXD5

Contents

Function

Interactions

Related Research Articles

References

Further reading